RNA–Protein interactions for RNA: ENST00000336086.10

URGCP-201, Transcript of upregulator of cell proliferation, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene URGCP, Length 5,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URGCP-201ENST00000336086 DCAF8L2P0C7V8 631 aa21.4■■□□□ 1.02
URGCP-201ENST00000336086 SUPT5HO00267 1087 aaKnown RBP21■□□□□ 0.95
URGCP-201ENST00000336086 PELP1Q8IZL8 1130 aaKnown RBP20.65■□□□□ 0.9
URGCP-201ENST00000336086 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.89
URGCP-201ENST00000336086 SHROOM4Q9ULL8 1493 aa20.48■□□□□ 0.87
URGCP-201ENST00000336086 EHMT2Q96KQ7 1210 aa20.29■□□□□ 0.84
URGCP-201ENST00000336086 PCGF6Q9BYE7 350 aa20.26■□□□□ 0.83
URGCP-201ENST00000336086 CENPBP07199 599 aaPredicted RBP20.06■□□□□ 0.8
URGCP-201ENST00000336086 MYT1Q01538 1121 aa20.04■□□□□ 0.8
URGCP-201ENST00000336086 ZEB1P37275 1124 aaPredicted RBP19.97■□□□□ 0.79
URGCP-201ENST00000336086 APLP2Q06481 763 aa19.86■□□□□ 0.77
URGCP-201ENST00000336086 ERICH6Q7L0X2 663 aa19.82■□□□□ 0.76
URGCP-201ENST00000336086 FAM9AQ8IZU1 332 aaPredicted RBP19.79■□□□□ 0.76
URGCP-201ENST00000336086 TTBK1Q5TCY1 1321 aaPredicted RBP19.73■□□□□ 0.75
URGCP-201ENST00000336086 CCER1Q8TC90 406 aaPredicted RBP19.69■□□□□ 0.74
URGCP-201ENST00000336086 HRCP23327 699 aa19.54■□□□□ 0.72
URGCP-201ENST00000336086 YTHDC1Q96MU7 727 aaKnown RBP19.52■□□□□ 0.71
URGCP-201ENST00000336086 TRIM41Q8WV44 630 aa19.4■□□□□ 0.7
URGCP-201ENST00000336086 NEFLP07196 543 aa19.39■□□□□ 0.7
URGCP-201ENST00000336086 TRIM26Q12899 539 aaPredicted RBP19.33■□□□□ 0.68
URGCP-201ENST00000336086 RANGAP1P46060 587 aaPredicted RBP19.2■□□□□ 0.66
URGCP-201ENST00000336086 PPARGC1BQ86YN6 1023 aaKnown RBP19.12■□□□□ 0.65
URGCP-201ENST00000336086 UBTFP17480 764 aaKnown RBP19.09■□□□□ 0.65
URGCP-201ENST00000336086 ATP1B4Q9UN42 357 aaPredicted RBP18.94■□□□□ 0.62
URGCP-201ENST00000336086 LOC105371045A0A1W2PR82 267 aa18.89■□□□□ 0.61
URGCP-201ENST00000336086 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
URGCP-201ENST00000336086 DIEXFQ68CQ4 756 aaKnown RBP18.81■□□□□ 0.6
URGCP-201ENST00000336086 DAXXQ9UER7 740 aaPredicted RBP18.77■□□□□ 0.59
URGCP-201ENST00000336086 GTF3C3Q9Y5Q9 886 aa18.71■□□□□ 0.59
URGCP-201ENST00000336086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
URGCP-201ENST00000336086 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
URGCP-201ENST00000336086 RTL5Q5HYW3 569 aaPredicted RBP18.62■□□□□ 0.57
URGCP-201ENST00000336086 ITGAEP38570 1179 aa18.58■□□□□ 0.57
URGCP-201ENST00000336086 POLR3GLQ9BT43 218 aa18.48■□□□□ 0.55
URGCP-201ENST00000336086 ACIN1Q9UKV3 1341 aaKnown RBP18.46■□□□□ 0.55
URGCP-201ENST00000336086 BCANQ96GW7 911 aa18.43■□□□□ 0.54
URGCP-201ENST00000336086 ZNF316A6NFI3 1004 aaPredicted RBP18.39■□□□□ 0.53
URGCP-201ENST00000336086 CNGB1Q14028 1251 aaPredicted RBP18.36■□□□□ 0.53
URGCP-201ENST00000336086 CDK11AQ9UQ88 783 aaPredicted RBP18.29■□□□□ 0.52
URGCP-201ENST00000336086 CLSPNQ9HAW4 1339 aa18.22■□□□□ 0.51
URGCP-201ENST00000336086 ANP32CO43423 234 aa18.15■□□□□ 0.5
URGCP-201ENST00000336086 NEUROD1Q13562 356 aa18.1■□□□□ 0.49
URGCP-201ENST00000336086 FAM50AQ14320 339 aaKnown RBP18.06■□□□□ 0.48
URGCP-201ENST00000336086 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
URGCP-201ENST00000336086 ANP32AP39687 249 aaKnown RBP17.98■□□□□ 0.47
URGCP-201ENST00000336086 TRIM52Q96A61 297 aa17.93■□□□□ 0.46
URGCP-201ENST00000336086 FKBP8Q14318 412 aa17.92■□□□□ 0.46
URGCP-201ENST00000336086 MYT1LQ9UL68 1186 aa17.92■□□□□ 0.46
URGCP-201ENST00000336086 DCAF1Q9Y4B6 1507 aa17.91■□□□□ 0.46
URGCP-201ENST00000336086 SLC4A1APQ9BWU0 796 aaKnown RBP17.9■□□□□ 0.46
URGCP-201ENST00000336086 EIF5BO60841 1220 aaKnown RBP17.88■□□□□ 0.45
URGCP-201ENST00000336086 NPM2Q86SE8 214 aaKnown RBP17.82■□□□□ 0.44
URGCP-201ENST00000336086 ABCC9O60706 1549 aa17.79■□□□□ 0.44
URGCP-201ENST00000336086 ZNF326Q5BKZ1 582 aaKnown RBP17.76■□□□□ 0.43
URGCP-201ENST00000336086 CANXP27824 592 aaKnown RBP17.69■□□□□ 0.42
URGCP-201ENST00000336086 NBR1Q14596 966 aa17.68■□□□□ 0.42
URGCP-201ENST00000336086 GLIPR1L2Q4G1C9 344 aa17.67■□□□□ 0.42
URGCP-201ENST00000336086 HNRNPUQ00839 825 aaKnown RBP eCLIP17.66■□□□□ 0.42
URGCP-201ENST00000336086 ZBTB47Q9UFB7 747 aaPredicted RBP17.66■□□□□ 0.42
URGCP-201ENST00000336086 MIER1Q8N108 512 aa17.63■□□□□ 0.41
URGCP-201ENST00000336086 CSRNP3Q8WYN3 585 aa17.61■□□□□ 0.41
URGCP-201ENST00000336086 DDX10Q13206 875 aaKnown RBP17.61■□□□□ 0.41
URGCP-201ENST00000336086 PABPN1Q86U42 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
URGCP-201ENST00000336086 ANP32EQ9BTT0 268 aa17.59■□□□□ 0.41
URGCP-201ENST00000336086 ANP32BQ92688 251 aaKnown RBP17.56■□□□□ 0.4
URGCP-201ENST00000336086 FAM9BQ8IZU0 186 aa17.53■□□□□ 0.4
URGCP-201ENST00000336086 CCDC136Q96JN2 1154 aa17.52■□□□□ 0.4
URGCP-201ENST00000336086 BCL11AQ9H165 835 aa17.51■□□□□ 0.39
URGCP-201ENST00000336086 TONSLQ96HA7 1378 aa17.51■□□□□ 0.39
URGCP-201ENST00000336086 UPF2Q9HAU5 1272 aaKnown RBP17.45■□□□□ 0.38
URGCP-201ENST00000336086 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
URGCP-201ENST00000336086 HSP90AA1P07900 732 aaKnown RBP17.42■□□□□ 0.38
URGCP-201ENST00000336086 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
URGCP-201ENST00000336086 MYO15BQ96JP2 1530 aa17.41■□□□□ 0.38
URGCP-201ENST00000336086 CCDC180Q9P1Z9 1646 aa17.36■□□□□ 0.37
URGCP-201ENST00000336086 ARXQ96QS3 562 aa17.36■□□□□ 0.37
URGCP-201ENST00000336086 NEFMP07197 916 aa17.36■□□□□ 0.37
URGCP-201ENST00000336086 SALL2Q9Y467 1007 aaPredicted RBP17.34■□□□□ 0.37
URGCP-201ENST00000336086 MRS2Q9HD23 443 aa17.33■□□□□ 0.37
URGCP-201ENST00000336086 TMC1Q8TDI8 760 aa17.31■□□□□ 0.36
URGCP-201ENST00000336086 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.36
URGCP-201ENST00000336086 DDRGK1Q96HY6 314 aa17.26■□□□□ 0.35
URGCP-201ENST00000336086 ARID3CA6NKF2 412 aa17.25■□□□□ 0.35
URGCP-201ENST00000336086 SUPT16HQ9Y5B9 1047 aaKnown RBP17.25■□□□□ 0.35
URGCP-201ENST00000336086 HIRIP3Q9BW71 556 aaPredicted RBP17.24■□□□□ 0.35
URGCP-201ENST00000336086 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
URGCP-201ENST00000336086 ZNF777Q9ULD5 760 aaPredicted RBP17.2■□□□□ 0.34
URGCP-201ENST00000336086 RTN4Q9NQC3 1192 aaKnown RBP17.15■□□□□ 0.34
URGCP-201ENST00000336086 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
URGCP-201ENST00000336086 BECN1Q14457 450 aa17.14■□□□□ 0.33
URGCP-201ENST00000336086 NOP58Q9Y2X3 529 aaKnown RBP17.14■□□□□ 0.33
URGCP-201ENST00000336086 TRIM44Q96DX7 344 aaPredicted RBP17.14■□□□□ 0.33
URGCP-201ENST00000336086 WDR43Q15061 677 aaKnown RBP eCLIP17.13■□□□□ 0.33
URGCP-201ENST00000336086 ZCCHC6Q5VYS8 1495 aaKnown RBP17.11■□□□□ 0.33
URGCP-201ENST00000336086 EIF4G2P78344 907 aaKnown RBP eCLIP17.11■□□□□ 0.33
URGCP-201ENST00000336086 ERICH6BQ5W0A0 696 aa17.1■□□□□ 0.33
URGCP-201ENST00000336086 PPP4R2Q9NY27 417 aa17.1■□□□□ 0.33
URGCP-201ENST00000336086 CHIC2Q9UKJ5 165 aa17.09■□□□□ 0.33
URGCP-201ENST00000336086 CLIP1P30622 1438 aa17.08■□□□□ 0.33
URGCP-201ENST00000336086 FBLN2P98095 1184 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms