RNA–Protein interactions for RNA: ENST00000335221.9

BPTF-203, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5 BASIC

Gene BPTF, Length 2,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-203ENST00000335221 INE1O15225 51 aa4.4□□□□□ -1.7
BPTF-203ENST00000335221 VPS13DQ5THJ4 4388 aa4.37□□□□□ -1.71
BPTF-203ENST00000335221 DNAH2Q9P225 4427 aa4.37□□□□□ -1.71
BPTF-203ENST00000335221 HECTD4Q9Y4D8 3996 aa4.36□□□□□ -1.71
BPTF-203ENST00000335221 FRAS1Q86XX4 4008 aa4.36□□□□□ -1.71
BPTF-203ENST00000335221 FBN3Q75N90 2809 aa4.34□□□□□ -1.71
BPTF-203ENST00000335221 DNAH6Q9C0G6 4158 aa4.3□□□□□ -1.72
BPTF-203ENST00000335221 DNAH8Q96JB1 4490 aa4.28□□□□□ -1.72
BPTF-203ENST00000335221 DNAH17Q9UFH2 4485 aa4.27□□□□□ -1.73
BPTF-203ENST00000335221 KRTAP21-3Q3LHN1 58 aa4.27□□□□□ -1.73
BPTF-203ENST00000335221 HYDINQ4G0P3 5121 aa4.27□□□□□ -1.73
BPTF-203ENST00000335221 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
BPTF-203ENST00000335221 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
BPTF-203ENST00000335221 DNAH5Q8TE73 4624 aa4.23□□□□□ -1.73
BPTF-203ENST00000335221 KRTAP13-2Q52LG2 175 aa4.23□□□□□ -1.73
BPTF-203ENST00000335221 KRTAP4-8Q9BYQ9 185 aa4.2□□□□□ -1.74
BPTF-203ENST00000335221 M0QZ58 72 aa4.2□□□□□ -1.74
BPTF-203ENST00000335221 FAT2Q9NYQ8 4349 aa4.19□□□□□ -1.74
BPTF-203ENST00000335221 PKD1P98161 4303 aa4.18□□□□□ -1.74
BPTF-203ENST00000335221 KRTAP10-2P60368 255 aa4.18□□□□□ -1.74
BPTF-203ENST00000335221 LRP1BQ9NZR2 4599 aa4.18□□□□□ -1.74
BPTF-203ENST00000335221 SPRR5A0A1B0GTR4 108 aa4.16□□□□□ -1.74
BPTF-203ENST00000335221 C9orf92A6NGG3 77 aa4.16□□□□□ -1.74
BPTF-203ENST00000335221 PKHD1P08F94 4074 aa4.15□□□□□ -1.74
BPTF-203ENST00000335221 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.15□□□□□ -1.75
BPTF-203ENST00000335221 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.75
BPTF-203ENST00000335221 VPS13BQ7Z7G8 4022 aa4.14□□□□□ -1.75
BPTF-203ENST00000335221 KRTAP9-6A0A140TA67 174 aa4.12□□□□□ -1.75
BPTF-203ENST00000335221 KRTAP10-1P60331 282 aa4.1□□□□□ -1.75
BPTF-203ENST00000335221 SACSQ9NZJ4 4579 aa4.1□□□□□ -1.75
BPTF-203ENST00000335221 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
BPTF-203ENST00000335221 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
BPTF-203ENST00000335221 KMT2CQ8NEZ4 4911 aaKnown RBP4.04□□□□□ -1.76
BPTF-203ENST00000335221 FAT1Q14517 4588 aa4.02□□□□□ -1.77
BPTF-203ENST00000335221 KRTAP1-4P0C5Y4 121 aa4.01□□□□□ -1.77
BPTF-203ENST00000335221 DYNC1H1Q14204 4646 aaKnown RBP4.01□□□□□ -1.77
BPTF-203ENST00000335221 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
BPTF-203ENST00000335221 RPS29P62273 56 aaKnown RBP3.97□□□□□ -1.77
BPTF-203ENST00000335221 RYR2Q92736 4967 aa3.97□□□□□ -1.77
BPTF-203ENST00000335221 APOBP04114 4563 aaKnown RBP3.97□□□□□ -1.77
BPTF-203ENST00000335221 SMR3BP02814 79 aaPredicted RBP3.96□□□□□ -1.77
BPTF-203ENST00000335221 KRTAP9-9Q9BYP9 154 aa3.94□□□□□ -1.78
BPTF-203ENST00000335221 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
BPTF-203ENST00000335221 A0A1B0GVY2 172 aa3.93□□□□□ -1.78
BPTF-203ENST00000335221 Q5VSD8 79 aa3.93□□□□□ -1.78
BPTF-203ENST00000335221 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.79
BPTF-203ENST00000335221 MYCBP2O75592 4640 aa3.89□□□□□ -1.79
BPTF-203ENST00000335221 RYR3Q15413 4870 aa3.89□□□□□ -1.79
BPTF-203ENST00000335221 PKHD1L1Q86WI1 4243 aa3.88□□□□□ -1.79
BPTF-203ENST00000335221 LRP1Q07954 4544 aaKnown RBP3.88□□□□□ -1.79
BPTF-203ENST00000335221 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
BPTF-203ENST00000335221 HSPG2P98160 4391 aa3.84□□□□□ -1.79
BPTF-203ENST00000335221 KRTAP4-8A0A0G2JLE6 195 aa3.82□□□□□ -1.8
BPTF-203ENST00000335221 TNXBP22105 4242 aa3.82□□□□□ -1.8
BPTF-203ENST00000335221 TNP1P09430 55 aa3.81□□□□□ -1.8
BPTF-203ENST00000335221 KRTAP17-1Q9BYP8 105 aa3.8□□□□□ -1.8
BPTF-203ENST00000335221 KIAA1109Q2LD37 5005 aa3.8□□□□□ -1.8
BPTF-203ENST00000335221 RYR1P21817 5038 aa3.78□□□□□ -1.8
BPTF-203ENST00000335221 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
BPTF-203ENST00000335221 FAT3Q8TDW7 4589 aa3.76□□□□□ -1.81
BPTF-203ENST00000335221 EPPK1P58107 5090 aaKnown RBP3.76□□□□□ -1.81
BPTF-203ENST00000335221 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
BPTF-203ENST00000335221 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
BPTF-203ENST00000335221 LPAP08519 4548 aa3.68□□□□□ -1.82
BPTF-203ENST00000335221 KRTAP4-7Q9BYR0 210 aa3.67□□□□□ -1.82
BPTF-203ENST00000335221 ABCA13Q86UQ4 5058 aa3.67□□□□□ -1.82
BPTF-203ENST00000335221 MT1HL1P0DM35 61 aa3.65□□□□□ -1.82
BPTF-203ENST00000335221 KRTAP10-10P60014 251 aa3.64□□□□□ -1.83
BPTF-203ENST00000335221 LRP2P98164 4655 aa3.63□□□□□ -1.83
BPTF-203ENST00000335221 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
BPTF-203ENST00000335221 KRTAP4-5Q9BYR2 181 aa3.61□□□□□ -1.83
BPTF-203ENST00000335221 KRTAP9-3Q9BYQ3 159 aa3.6□□□□□ -1.83
BPTF-203ENST00000335221 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
BPTF-203ENST00000335221 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
BPTF-203ENST00000335221 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
BPTF-203ENST00000335221 HERC2O95714 4834 aa3.51□□□□□ -1.85
BPTF-203ENST00000335221 MUC2Q02817 5179 aa3.48□□□□□ -1.85
BPTF-203ENST00000335221 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
BPTF-203ENST00000335221 MUC17Q685J3 4493 aa3.42□□□□□ -1.86
BPTF-203ENST00000335221 PCLOQ9Y6V0 5065 aa3.42□□□□□ -1.86
BPTF-203ENST00000335221 BIRC6Q9NR09 4857 aa3.41□□□□□ -1.86
BPTF-203ENST00000335221 HERC1Q15751 4861 aa3.4□□□□□ -1.86
BPTF-203ENST00000335221 KRTAP4-1Q9BYQ7 146 aa3.4□□□□□ -1.87
BPTF-203ENST00000335221 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
BPTF-203ENST00000335221 KRTAP8-1Q8IUC2 63 aa3.33□□□□□ -1.88
BPTF-203ENST00000335221 KRTAP19-2Q3LHN2 52 aa3.31□□□□□ -1.88
BPTF-203ENST00000335221 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
BPTF-203ENST00000335221 FAT4Q6V0I7 4981 aa3.29□□□□□ -1.88
BPTF-203ENST00000335221 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
BPTF-203ENST00000335221 RNF213Q63HN8 5207 aa3.27□□□□□ -1.89
BPTF-203ENST00000335221 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
BPTF-203ENST00000335221 UBR4Q5T4S7 5183 aa3.25□□□□□ -1.89
BPTF-203ENST00000335221 FLGP20930 4061 aaPredicted RBP3.24□□□□□ -1.89
BPTF-203ENST00000335221 KRTAP2-3P0C7H8 128 aa3.2□□□□□ -1.9
BPTF-203ENST00000335221 KRTAP2-4Q9BYR9 128 aa3.2□□□□□ -1.9
BPTF-203ENST00000335221 KRTAP2-1Q9BYU5 128 aa3.2□□□□□ -1.9
BPTF-203ENST00000335221 M0R2T5 61 aa3.19□□□□□ -1.9
BPTF-203ENST00000335221 KRTAP9-8Q9BYQ0 159 aa3.18□□□□□ -1.9
BPTF-203ENST00000335221 KRTAP10-5P60370 271 aa3.17□□□□□ -1.9
BPTF-203ENST00000335221 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms