RNA–Protein interactions for RNA: ENST00000335221.9

BPTF-203, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5 BASIC

Gene BPTF, Length 2,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-203ENST00000335221 PELP1Q8IZL8 1130 aaKnown RBP16.18■□□□□ 0.18
BPTF-203ENST00000335221 MYT1Q01538 1121 aa15.98■□□□□ 0.15
BPTF-203ENST00000335221 TTBK1Q5TCY1 1321 aaPredicted RBP15.37■□□□□ 0.05
BPTF-203ENST00000335221 PRKCSHP14314 528 aaPredicted RBP15.04■□□□□ -0
BPTF-203ENST00000335221 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
BPTF-203ENST00000335221 ERICH6Q7L0X2 663 aa14.8□□□□□ -0.04
BPTF-203ENST00000335221 AEBP2Q6ZN18 517 aaPredicted RBP14.76□□□□□ -0.05
BPTF-203ENST00000335221 SLC24A1O60721 1099 aa14.76□□□□□ -0.05
BPTF-203ENST00000335221 HRCP23327 699 aa14.73□□□□□ -0.05
BPTF-203ENST00000335221 APLP2Q06481 763 aa14.66□□□□□ -0.06
BPTF-203ENST00000335221 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
BPTF-203ENST00000335221 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
BPTF-203ENST00000335221 FAM9AQ8IZU1 332 aaPredicted RBP14.41□□□□□ -0.1
BPTF-203ENST00000335221 PPARGC1BQ86YN6 1023 aaKnown RBP14.31□□□□□ -0.12
BPTF-203ENST00000335221 CHIC1Q5VXU3 224 aa14.2□□□□□ -0.14
BPTF-203ENST00000335221 CENPBP07199 599 aaPredicted RBP14.18□□□□□ -0.14
BPTF-203ENST00000335221 DAXXQ9UER7 740 aaPredicted RBP14.11□□□□□ -0.15
BPTF-203ENST00000335221 EIF5BO60841 1220 aaKnown RBP13.93□□□□□ -0.18
BPTF-203ENST00000335221 ACIN1Q9UKV3 1341 aaKnown RBP13.9□□□□□ -0.18
BPTF-203ENST00000335221 GTF3C3Q9Y5Q9 886 aa13.86□□□□□ -0.19
BPTF-203ENST00000335221 PCGF6Q9BYE7 350 aa13.84□□□□□ -0.19
BPTF-203ENST00000335221 ANP32EQ9BTT0 268 aa13.82□□□□□ -0.2
BPTF-203ENST00000335221 NEUROD1Q13562 356 aa13.76□□□□□ -0.21
BPTF-203ENST00000335221 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
BPTF-203ENST00000335221 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
BPTF-203ENST00000335221 ZEB1P37275 1124 aaPredicted RBP13.59□□□□□ -0.23
BPTF-203ENST00000335221 UBE2Q2Q8WVN8 375 aa13.57□□□□□ -0.24
BPTF-203ENST00000335221 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
BPTF-203ENST00000335221 PODXL2Q9NZ53 605 aa13.43□□□□□ -0.26
BPTF-203ENST00000335221 PKNOX2Q96KN3 472 aa13.32□□□□□ -0.28
BPTF-203ENST00000335221 SALL2Q9Y467 1007 aaPredicted RBP13.23□□□□□ -0.29
BPTF-203ENST00000335221 CCDC136Q96JN2 1154 aa13.21□□□□□ -0.29
BPTF-203ENST00000335221 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
BPTF-203ENST00000335221 MYO15BQ96JP2 1530 aa13.12□□□□□ -0.31
BPTF-203ENST00000335221 TRIM26Q12899 539 aaPredicted RBP13.09□□□□□ -0.31
BPTF-203ENST00000335221 ERICH6BQ5W0A0 696 aa13.09□□□□□ -0.31
BPTF-203ENST00000335221 DIEXFQ68CQ4 756 aaKnown RBP13.03□□□□□ -0.32
BPTF-203ENST00000335221 NEFLP07196 543 aa13.01□□□□□ -0.33
BPTF-203ENST00000335221 MYT1LQ9UL68 1186 aa13□□□□□ -0.33
BPTF-203ENST00000335221 CCDC180Q9P1Z9 1646 aa12.98□□□□□ -0.33
BPTF-203ENST00000335221 NCBP3Q53F19 620 aaKnown RBP12.98□□□□□ -0.33
BPTF-203ENST00000335221 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
BPTF-203ENST00000335221 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.33
BPTF-203ENST00000335221 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.33
BPTF-203ENST00000335221 DCAF1Q9Y4B6 1507 aa12.95□□□□□ -0.34
BPTF-203ENST00000335221 DEKP35659 375 aaKnown RBP12.92□□□□□ -0.34
BPTF-203ENST00000335221 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
BPTF-203ENST00000335221 PDE4CQ08493 712 aa12.91□□□□□ -0.34
BPTF-203ENST00000335221 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
BPTF-203ENST00000335221 CLSPNQ9HAW4 1339 aa12.89□□□□□ -0.35
BPTF-203ENST00000335221 SUPT16HQ9Y5B9 1047 aaKnown RBP12.87□□□□□ -0.35
BPTF-203ENST00000335221 ARXQ96QS3 562 aa12.8□□□□□ -0.36
BPTF-203ENST00000335221 GLIPR1L2Q4G1C9 344 aa12.78□□□□□ -0.36
BPTF-203ENST00000335221 A0A0U1RQG5 324 aaPredicted RBP12.75□□□□□ -0.37
BPTF-203ENST00000335221 FGD1P98174 961 aa12.75□□□□□ -0.37
BPTF-203ENST00000335221 RBM19Q9Y4C8 960 aaKnown RBP12.74□□□□□ -0.37
BPTF-203ENST00000335221 ZMYND15Q9H091 742 aa12.7□□□□□ -0.38
BPTF-203ENST00000335221 RTN4Q9NQC3 1192 aaKnown RBP12.7□□□□□ -0.38
BPTF-203ENST00000335221 BCL11BQ9C0K0 894 aaPredicted RBP12.7□□□□□ -0.38
BPTF-203ENST00000335221 MSH5O43196 834 aa12.69□□□□□ -0.38
BPTF-203ENST00000335221 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
BPTF-203ENST00000335221 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
BPTF-203ENST00000335221 VSIG10Q8N0Z9 540 aa12.62□□□□□ -0.39
BPTF-203ENST00000335221 AAMPQ13685 434 aa12.61□□□□□ -0.39
BPTF-203ENST00000335221 TAF7LQ5H9L4 462 aa12.6□□□□□ -0.39
BPTF-203ENST00000335221 RBM10P98175 930 aaKnown RBP12.59□□□□□ -0.39
BPTF-203ENST00000335221 TRIM41Q8WV44 630 aa12.58□□□□□ -0.39
BPTF-203ENST00000335221 SHROOM4Q9ULL8 1493 aa12.57□□□□□ -0.4
BPTF-203ENST00000335221 PHF23Q9BUL5 403 aaPredicted RBP12.57□□□□□ -0.4
BPTF-203ENST00000335221 ZCCHC6Q5VYS8 1495 aaKnown RBP12.53□□□□□ -0.4
BPTF-203ENST00000335221 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
BPTF-203ENST00000335221 MIER1Q8N108 512 aa12.52□□□□□ -0.4
BPTF-203ENST00000335221 PLPPR3Q6T4P5 718 aa12.52□□□□□ -0.41
BPTF-203ENST00000335221 CCER1Q8TC90 406 aaPredicted RBP12.51□□□□□ -0.41
BPTF-203ENST00000335221 ZNF316A6NFI3 1004 aaPredicted RBP12.47□□□□□ -0.41
BPTF-203ENST00000335221 BCANQ96GW7 911 aa12.45□□□□□ -0.42
BPTF-203ENST00000335221 NBR1Q14596 966 aa12.43□□□□□ -0.42
BPTF-203ENST00000335221 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
BPTF-203ENST00000335221 LOC105371045A0A1W2PR82 267 aa12.39□□□□□ -0.43
BPTF-203ENST00000335221 SUPT5HO00267 1087 aaKnown RBP12.39□□□□□ -0.43
BPTF-203ENST00000335221 DCAF8L2P0C7V8 631 aa12.39□□□□□ -0.43
BPTF-203ENST00000335221 RTL5Q5HYW3 569 aaPredicted RBP12.39□□□□□ -0.43
BPTF-203ENST00000335221 SENP3Q9H4L4 574 aaPredicted RBP12.39□□□□□ -0.43
BPTF-203ENST00000335221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.38□□□□□ -0.43
BPTF-203ENST00000335221 TULP1O00294 542 aaPredicted RBP12.38□□□□□ -0.43
BPTF-203ENST00000335221 HOMEZQ8IX15 550 aa12.38□□□□□ -0.43
BPTF-203ENST00000335221 PAXIP1Q6ZW49 1069 aaPredicted RBP12.37□□□□□ -0.43
BPTF-203ENST00000335221 DHX37Q8IY37 1157 aaKnown RBP12.35□□□□□ -0.43
BPTF-203ENST00000335221 CHMP4AQ9BY43 222 aa12.32□□□□□ -0.44
BPTF-203ENST00000335221 BRD2P25440 801 aaKnown RBP12.3□□□□□ -0.44
BPTF-203ENST00000335221 FKBP8Q14318 412 aa12.3□□□□□ -0.44
BPTF-203ENST00000335221 ZNF326Q5BKZ1 582 aaKnown RBP12.29□□□□□ -0.44
BPTF-203ENST00000335221 NAP1L5Q96NT1 182 aaPredicted RBP12.29□□□□□ -0.44
BPTF-203ENST00000335221 EHMT2Q96KQ7 1210 aa12.26□□□□□ -0.45
BPTF-203ENST00000335221 RSPH4AQ5TD94 716 aa12.25□□□□□ -0.45
BPTF-203ENST00000335221 NOP58Q9Y2X3 529 aaKnown RBP12.24□□□□□ -0.45
BPTF-203ENST00000335221 C11orf95C9JLR9 678 aaPredicted RBP12.24□□□□□ -0.45
BPTF-203ENST00000335221 HAP1P54257 671 aaPredicted RBP12.24□□□□□ -0.45
BPTF-203ENST00000335221 ITGAEP38570 1179 aa12.24□□□□□ -0.45
BPTF-203ENST00000335221 NAP1L2Q9ULW6 460 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms