RNA–Protein interactions for RNA: ENST00000329043.7

NFXL1-201, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFXL1, Length 3,723 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-201ENST00000329043 A0A1B0GVY2 172 aa6.53□□□□□ -1.36
NFXL1-201ENST00000329043 KRTAP10-8P60410 259 aa6.51□□□□□ -1.37
NFXL1-201ENST00000329043 KRTAP10-4P60372 401 aaPredicted RBP6.5□□□□□ -1.37
NFXL1-201ENST00000329043 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
NFXL1-201ENST00000329043 S4R3F8 94 aa6.49□□□□□ -1.37
NFXL1-201ENST00000329043 ROMO1P60602 79 aa6.48□□□□□ -1.37
NFXL1-201ENST00000329043 KIAA1109Q2LD37 5005 aa6.46□□□□□ -1.37
NFXL1-201ENST00000329043 KRTAP21-3Q3LHN1 58 aa6.46□□□□□ -1.37
NFXL1-201ENST00000329043 XP32Q5T750 250 aa6.45□□□□□ -1.38
NFXL1-201ENST00000329043 P0C880 135 aa6.44□□□□□ -1.38
NFXL1-201ENST00000329043 C10orf95Q9H7T3 257 aa6.42□□□□□ -1.38
NFXL1-201ENST00000329043 HSPG2P98160 4391 aa6.41□□□□□ -1.38
NFXL1-201ENST00000329043 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
NFXL1-201ENST00000329043 RYR1P21817 5038 aa6.36□□□□□ -1.39
NFXL1-201ENST00000329043 RYR3Q15413 4870 aa6.35□□□□□ -1.39
NFXL1-201ENST00000329043 RYR2Q92736 4967 aa6.34□□□□□ -1.39
NFXL1-201ENST00000329043 KRTAP10-6P60371 365 aaPredicted RBP6.33□□□□□ -1.4
NFXL1-201ENST00000329043 KRTAP3-3Q9BYR6 98 aa6.33□□□□□ -1.4
NFXL1-201ENST00000329043 LRP2P98164 4655 aa6.32□□□□□ -1.4
NFXL1-201ENST00000329043 PKHD1L1Q86WI1 4243 aa6.32□□□□□ -1.4
NFXL1-201ENST00000329043 KRTAP17-1Q9BYP8 105 aa6.31□□□□□ -1.4
NFXL1-201ENST00000329043 LPAP08519 4548 aa6.26□□□□□ -1.41
NFXL1-201ENST00000329043 KRTAP3-2Q9BYR7 98 aa6.25□□□□□ -1.41
NFXL1-201ENST00000329043 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
NFXL1-201ENST00000329043 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
NFXL1-201ENST00000329043 M0QZ58 72 aa6.22□□□□□ -1.41
NFXL1-201ENST00000329043 J3QL48 77 aa6.2□□□□□ -1.42
NFXL1-201ENST00000329043 TPRXLQ17RH7 258 aa6.2□□□□□ -1.42
NFXL1-201ENST00000329043 MT1HL1P0DM35 61 aa6.19□□□□□ -1.42
NFXL1-201ENST00000329043 R4GN34 69 aa6.19□□□□□ -1.42
NFXL1-201ENST00000329043 KRTAP4-5Q9BYR2 181 aa6.17□□□□□ -1.42
NFXL1-201ENST00000329043 TNXBP22105 4242 aa6.14□□□□□ -1.43
NFXL1-201ENST00000329043 EPPK1P58107 5090 aaKnown RBP6.11□□□□□ -1.43
NFXL1-201ENST00000329043 ABCA13Q86UQ4 5058 aa6.1□□□□□ -1.43
NFXL1-201ENST00000329043 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
NFXL1-201ENST00000329043 CAMK2N1Q7Z7J9 78 aa6.04□□□□□ -1.44
NFXL1-201ENST00000329043 LUZP6Q538Z0 58 aa6.03□□□□□ -1.44
NFXL1-201ENST00000329043 MUC2Q02817 5179 aa6.02□□□□□ -1.45
NFXL1-201ENST00000329043 SEC61BP60468 96 aaKnown RBP5.99□□□□□ -1.45
NFXL1-201ENST00000329043 LORP23490 312 aaPredicted RBP5.99□□□□□ -1.45
NFXL1-201ENST00000329043 KRTAP4-1Q9BYQ7 146 aa5.89□□□□□ -1.47
NFXL1-201ENST00000329043 HERC2O95714 4834 aa5.86□□□□□ -1.47
NFXL1-201ENST00000329043 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
NFXL1-201ENST00000329043 A0A0A0MQY5 61 aa5.81□□□□□ -1.48
NFXL1-201ENST00000329043 KRTAP15-1Q3LI76 137 aa5.79□□□□□ -1.48
NFXL1-201ENST00000329043 M0R2T5 61 aa5.79□□□□□ -1.48
NFXL1-201ENST00000329043 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
NFXL1-201ENST00000329043 HERC1Q15751 4861 aa5.71□□□□□ -1.5
NFXL1-201ENST00000329043 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
NFXL1-201ENST00000329043 PP632Q6XCG6 107 aa5.62□□□□□ -1.51
NFXL1-201ENST00000329043 PCLOQ9Y6V0 5065 aa5.62□□□□□ -1.51
NFXL1-201ENST00000329043 TNP1P09430 55 aa5.6□□□□□ -1.51
NFXL1-201ENST00000329043 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.51
NFXL1-201ENST00000329043 MUC17Q685J3 4493 aa5.58□□□□□ -1.52
NFXL1-201ENST00000329043 KRTAP10-10P60014 251 aa5.47□□□□□ -1.53
NFXL1-201ENST00000329043 UBR4Q5T4S7 5183 aa5.46□□□□□ -1.54
NFXL1-201ENST00000329043 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
NFXL1-201ENST00000329043 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
NFXL1-201ENST00000329043 HMCN2Q8NDA2 5059 aa5.38□□□□□ -1.55
NFXL1-201ENST00000329043 LCE3AQ5TA76 89 aa5.24□□□□□ -1.57
NFXL1-201ENST00000329043 LCE2CQ5TA81 110 aa5.23□□□□□ -1.57
NFXL1-201ENST00000329043 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.57
NFXL1-201ENST00000329043 MT1HP80294 61 aa5.2□□□□□ -1.58
NFXL1-201ENST00000329043 MT1FP04733 61 aa5.2□□□□□ -1.58
NFXL1-201ENST00000329043 MT2AP02795 61 aa5.15□□□□□ -1.58
NFXL1-201ENST00000329043 SPRR2GQ9BYE4 73 aa5.12□□□□□ -1.59
NFXL1-201ENST00000329043 USH2AO75445 5202 aa5.11□□□□□ -1.59
NFXL1-201ENST00000329043 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
NFXL1-201ENST00000329043 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
NFXL1-201ENST00000329043 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
NFXL1-201ENST00000329043 KMT2DO14686 5537 aa5.01□□□□□ -1.61
NFXL1-201ENST00000329043 KRTAP10-12P60413 245 aa4.98□□□□□ -1.61
NFXL1-201ENST00000329043 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
NFXL1-201ENST00000329043 KRTAP10-7P60409 375 aaPredicted RBP4.94□□□□□ -1.62
NFXL1-201ENST00000329043 MT1BP07438 61 aa4.93□□□□□ -1.62
NFXL1-201ENST00000329043 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
NFXL1-201ENST00000329043 MT1XP80297 61 aa4.92□□□□□ -1.62
NFXL1-201ENST00000329043 PRO2289Q9P1D8 64 aa4.88□□□□□ -1.63
NFXL1-201ENST00000329043 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
NFXL1-201ENST00000329043 INE1O15225 51 aa4.83□□□□□ -1.64
NFXL1-201ENST00000329043 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
NFXL1-201ENST00000329043 KRTAP19-8Q3LI54 63 aa4.82□□□□□ -1.64
NFXL1-201ENST00000329043 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
NFXL1-201ENST00000329043 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
NFXL1-201ENST00000329043 KRTAP4-8Q9BYQ9 185 aa4.78□□□□□ -1.64
NFXL1-201ENST00000329043 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
NFXL1-201ENST00000329043 LCE2BO14633 110 aa4.71□□□□□ -1.66
NFXL1-201ENST00000329043 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
NFXL1-201ENST00000329043 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
NFXL1-201ENST00000329043 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
NFXL1-201ENST00000329043 CRCT1Q9UGL9 99 aa4.55□□□□□ -1.68
NFXL1-201ENST00000329043 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
NFXL1-201ENST00000329043 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
NFXL1-201ENST00000329043 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
NFXL1-201ENST00000329043 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
NFXL1-201ENST00000329043 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
NFXL1-201ENST00000329043 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
NFXL1-201ENST00000329043 LCE2AQ5TA79 106 aaPredicted RBP4.38□□□□□ -1.71
NFXL1-201ENST00000329043 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
NFXL1-201ENST00000329043 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms