RNA–Protein interactions for RNA: ENST00000329043.7

NFXL1-201, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFXL1, Length 3,723 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-201ENST00000329043 NISCHQ9Y2I1 1504 aa24.29■■□□□ 1.48
NFXL1-201ENST00000329043 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
NFXL1-201ENST00000329043 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.11
NFXL1-201ENST00000329043 DCAF8L2P0C7V8 631 aa21.92■■□□□ 1.1
NFXL1-201ENST00000329043 PCGF6Q9BYE7 350 aa20.84■□□□□ 0.93
NFXL1-201ENST00000329043 EHMT2Q96KQ7 1210 aa20.78■□□□□ 0.92
NFXL1-201ENST00000329043 CHIC1Q5VXU3 224 aa20.76■□□□□ 0.91
NFXL1-201ENST00000329043 LOC105371045A0A1W2PR82 267 aa20.64■□□□□ 0.89
NFXL1-201ENST00000329043 PPARGC1BQ86YN6 1023 aaKnown RBP20.51■□□□□ 0.87
NFXL1-201ENST00000329043 FAM9AQ8IZU1 332 aaPredicted RBP20.5■□□□□ 0.87
NFXL1-201ENST00000329043 MYO15BQ96JP2 1530 aa20.47■□□□□ 0.87
NFXL1-201ENST00000329043 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
NFXL1-201ENST00000329043 HRCP23327 699 aa20.4■□□□□ 0.86
NFXL1-201ENST00000329043 TRIM41Q8WV44 630 aa20.11■□□□□ 0.81
NFXL1-201ENST00000329043 TTBK1Q5TCY1 1321 aaPredicted RBP20.05■□□□□ 0.8
NFXL1-201ENST00000329043 CCDC180Q9P1Z9 1646 aa19.95■□□□□ 0.78
NFXL1-201ENST00000329043 TRIM26Q12899 539 aaPredicted RBP19.89■□□□□ 0.78
NFXL1-201ENST00000329043 ABCC9O60706 1549 aa19.69■□□□□ 0.74
NFXL1-201ENST00000329043 SCRIBQ14160 1630 aa19.68■□□□□ 0.74
NFXL1-201ENST00000329043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.55■□□□□ 0.72
NFXL1-201ENST00000329043 DCAF1Q9Y4B6 1507 aa19.54■□□□□ 0.72
NFXL1-201ENST00000329043 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
NFXL1-201ENST00000329043 RANGAP1P46060 587 aaPredicted RBP19.52■□□□□ 0.72
NFXL1-201ENST00000329043 CCER1Q8TC90 406 aaPredicted RBP19.5■□□□□ 0.71
NFXL1-201ENST00000329043 ZEB1P37275 1124 aaPredicted RBP19.39■□□□□ 0.69
NFXL1-201ENST00000329043 UBTFP17480 764 aaKnown RBP19.36■□□□□ 0.69
NFXL1-201ENST00000329043 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
NFXL1-201ENST00000329043 PABPN1Q86U42 306 aaKnown RBP eCLIP19.31■□□□□ 0.68
NFXL1-201ENST00000329043 RB1CC1Q8TDY2 1594 aa19.31■□□□□ 0.68
NFXL1-201ENST00000329043 YTHDC1Q96MU7 727 aaKnown RBP19.14■□□□□ 0.65
NFXL1-201ENST00000329043 HNRNPUL2Q1KMD3 747 aaKnown RBP19.13■□□□□ 0.65
NFXL1-201ENST00000329043 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
NFXL1-201ENST00000329043 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
NFXL1-201ENST00000329043 DIEXFQ68CQ4 756 aaKnown RBP19■□□□□ 0.63
NFXL1-201ENST00000329043 WIZO95785 1651 aa18.97■□□□□ 0.63
NFXL1-201ENST00000329043 APLP2Q06481 763 aa18.96■□□□□ 0.63
NFXL1-201ENST00000329043 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
NFXL1-201ENST00000329043 NEUROD1Q13562 356 aa18.89■□□□□ 0.62
NFXL1-201ENST00000329043 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
NFXL1-201ENST00000329043 SOGA1O94964 1423 aa18.85■□□□□ 0.61
NFXL1-201ENST00000329043 GTF3C3Q9Y5Q9 886 aa18.85■□□□□ 0.61
NFXL1-201ENST00000329043 CCDC88BA6NC98 1476 aa18.83■□□□□ 0.6
NFXL1-201ENST00000329043 CENPBP07199 599 aaPredicted RBP18.81■□□□□ 0.6
NFXL1-201ENST00000329043 ITGAEP38570 1179 aa18.8■□□□□ 0.6
NFXL1-201ENST00000329043 ACIN1Q9UKV3 1341 aaKnown RBP18.77■□□□□ 0.59
NFXL1-201ENST00000329043 NACADO15069 1562 aa18.76■□□□□ 0.59
NFXL1-201ENST00000329043 CEP162Q5TB80 1403 aa18.74■□□□□ 0.59
NFXL1-201ENST00000329043 RUSC2Q8N2Y8 1516 aa18.73■□□□□ 0.59
NFXL1-201ENST00000329043 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
NFXL1-201ENST00000329043 ATP1B4Q9UN42 357 aaPredicted RBP18.66■□□□□ 0.58
NFXL1-201ENST00000329043 ZNF316A6NFI3 1004 aaPredicted RBP18.64■□□□□ 0.57
NFXL1-201ENST00000329043 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
NFXL1-201ENST00000329043 MIER1Q8N108 512 aa18.58■□□□□ 0.56
NFXL1-201ENST00000329043 TNIKQ9UKE5 1360 aa18.52■□□□□ 0.55
NFXL1-201ENST00000329043 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
NFXL1-201ENST00000329043 CLIP1P30622 1438 aa18.44■□□□□ 0.54
NFXL1-201ENST00000329043 P3H3Q8IVL6 736 aa18.41■□□□□ 0.54
NFXL1-201ENST00000329043 TOP2AP11388 1531 aaKnown RBP18.41■□□□□ 0.54
NFXL1-201ENST00000329043 GOLGA3Q08378 1498 aa18.39■□□□□ 0.53
NFXL1-201ENST00000329043 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
NFXL1-201ENST00000329043 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
NFXL1-201ENST00000329043 KANK4Q5T7N3 995 aaPredicted RBP18.33■□□□□ 0.52
NFXL1-201ENST00000329043 FAM50AQ14320 339 aaKnown RBP18.28■□□□□ 0.52
NFXL1-201ENST00000329043 RAPGEF2Q9Y4G8 1499 aa18.26■□□□□ 0.51
NFXL1-201ENST00000329043 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
NFXL1-201ENST00000329043 EEA1Q15075 1411 aa18.24■□□□□ 0.51
NFXL1-201ENST00000329043 BAZ1BQ9UIG0 1483 aaKnown RBP18.22■□□□□ 0.51
NFXL1-201ENST00000329043 CEP164Q9UPV0 1460 aa18.22■□□□□ 0.51
NFXL1-201ENST00000329043 BCANQ96GW7 911 aa18.21■□□□□ 0.51
NFXL1-201ENST00000329043 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.49
NFXL1-201ENST00000329043 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
NFXL1-201ENST00000329043 SYNJ1O43426 1573 aa18.12■□□□□ 0.49
NFXL1-201ENST00000329043 ATAD2BQ9ULI0 1458 aa18.1■□□□□ 0.49
NFXL1-201ENST00000329043 DDX10Q13206 875 aaKnown RBP18.08■□□□□ 0.48
NFXL1-201ENST00000329043 KCNH8Q96L42 1107 aa18.08■□□□□ 0.48
NFXL1-201ENST00000329043 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
NFXL1-201ENST00000329043 SIN3AQ96ST3 1273 aa18.08■□□□□ 0.48
NFXL1-201ENST00000329043 CNGB1Q14028 1251 aaPredicted RBP18.06■□□□□ 0.48
NFXL1-201ENST00000329043 UNC13AQ9UPW8 1703 aa18.01■□□□□ 0.47
NFXL1-201ENST00000329043 MYT1Q01538 1121 aa17.97■□□□□ 0.47
NFXL1-201ENST00000329043 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
NFXL1-201ENST00000329043 DHX57Q6P158 1386 aaKnown RBP17.95■□□□□ 0.46
NFXL1-201ENST00000329043 TRIM52Q96A61 297 aa17.94■□□□□ 0.46
NFXL1-201ENST00000329043 KIF21BO75037 1637 aa17.94■□□□□ 0.46
NFXL1-201ENST00000329043 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
NFXL1-201ENST00000329043 CCNB3Q8WWL7 1395 aa17.88■□□□□ 0.45
NFXL1-201ENST00000329043 SUPT16HQ9Y5B9 1047 aaKnown RBP17.87■□□□□ 0.45
NFXL1-201ENST00000329043 ARAP1Q96P48 1450 aa17.86■□□□□ 0.45
NFXL1-201ENST00000329043 FKBP8Q14318 412 aa17.85■□□□□ 0.45
NFXL1-201ENST00000329043 CHIC2Q9UKJ5 165 aa17.85■□□□□ 0.45
NFXL1-201ENST00000329043 CUX2O14529 1486 aa17.84■□□□□ 0.45
NFXL1-201ENST00000329043 RAB3GAP2Q9H2M9 1393 aa17.82■□□□□ 0.44
NFXL1-201ENST00000329043 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
NFXL1-201ENST00000329043 NEFLP07196 543 aa17.8■□□□□ 0.44
NFXL1-201ENST00000329043 CARMIL1Q5VZK9 1371 aa17.77■□□□□ 0.44
NFXL1-201ENST00000329043 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
NFXL1-201ENST00000329043 SENP3-EIF4A1A0A087X0R7 540 aa17.75■□□□□ 0.43
NFXL1-201ENST00000329043 ANP32CO43423 234 aa17.74■□□□□ 0.43
NFXL1-201ENST00000329043 RRP7BPQ9NSQ0 103 aa17.73■□□□□ 0.43
NFXL1-201ENST00000329043 PRXQ9BXM0 1461 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms