RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 RYR1P21817 5038 aa7.15□□□□□ -1.27
SRRM1-201ENST00000323848 SACSQ9NZJ4 4579 aa7.13□□□□□ -1.27
SRRM1-201ENST00000323848 KRTAP10-4P60372 401 aaPredicted RBP7.12□□□□□ -1.27
SRRM1-201ENST00000323848 APOBP04114 4563 aaKnown RBP7.1□□□□□ -1.27
SRRM1-201ENST00000323848 RYR3Q15413 4870 aa7.1□□□□□ -1.27
SRRM1-201ENST00000323848 A0A0A0MQY5 61 aa7.1□□□□□ -1.27
SRRM1-201ENST00000323848 H1FX-AS1Q4G0G2 97 aa7.08□□□□□ -1.28
SRRM1-201ENST00000323848 SEC61BP60468 96 aaKnown RBP7.07□□□□□ -1.28
SRRM1-201ENST00000323848 M0R2T5 61 aa7.07□□□□□ -1.28
SRRM1-201ENST00000323848 NDUFAF8A1L188 74 aa7.06□□□□□ -1.28
SRRM1-201ENST00000323848 ROMO1P60602 79 aa7.05□□□□□ -1.28
SRRM1-201ENST00000323848 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
SRRM1-201ENST00000323848 KRTAP3-1Q9BYR8 98 aa7.03□□□□□ -1.28
SRRM1-201ENST00000323848 ALMS1Q8TCU4 4167 aa7.02□□□□□ -1.29
SRRM1-201ENST00000323848 R4GN34 69 aa7.01□□□□□ -1.29
SRRM1-201ENST00000323848 FAT2Q9NYQ8 4349 aa6.99□□□□□ -1.29
SRRM1-201ENST00000323848 M0QZ58 72 aa6.98□□□□□ -1.29
SRRM1-201ENST00000323848 MT1HL1P0DM35 61 aa6.96□□□□□ -1.29
SRRM1-201ENST00000323848 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
SRRM1-201ENST00000323848 P0C880 135 aa6.94□□□□□ -1.3
SRRM1-201ENST00000323848 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
SRRM1-201ENST00000323848 H0YAA0 97 aa6.94□□□□□ -1.3
SRRM1-201ENST00000323848 RYR2Q92736 4967 aa6.93□□□□□ -1.3
SRRM1-201ENST00000323848 CAMK2N1Q7Z7J9 78 aa6.88□□□□□ -1.31
SRRM1-201ENST00000323848 PKD1P98161 4303 aa6.88□□□□□ -1.31
SRRM1-201ENST00000323848 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
SRRM1-201ENST00000323848 LRP2P98164 4655 aa6.8□□□□□ -1.32
SRRM1-201ENST00000323848 LUZP6Q538Z0 58 aa6.78□□□□□ -1.32
SRRM1-201ENST00000323848 EPPK1P58107 5090 aaKnown RBP6.77□□□□□ -1.33
SRRM1-201ENST00000323848 KRTAP13-4Q3LI77 160 aa6.69□□□□□ -1.34
SRRM1-201ENST00000323848 HSPG2P98160 4391 aa6.69□□□□□ -1.34
SRRM1-201ENST00000323848 HERC2O95714 4834 aa6.66□□□□□ -1.34
SRRM1-201ENST00000323848 LPAP08519 4548 aa6.64□□□□□ -1.35
SRRM1-201ENST00000323848 KRTAP3-3Q9BYR6 98 aa6.64□□□□□ -1.35
SRRM1-201ENST00000323848 KRTAP10-6P60371 365 aaPredicted RBP6.62□□□□□ -1.35
SRRM1-201ENST00000323848 KRTAP12-2P59991 146 aa6.58□□□□□ -1.36
SRRM1-201ENST00000323848 KRTAP3-2Q9BYR7 98 aa6.51□□□□□ -1.37
SRRM1-201ENST00000323848 ABCA13Q86UQ4 5058 aa6.5□□□□□ -1.37
SRRM1-201ENST00000323848 KRTAP4-1Q9BYQ7 146 aa6.49□□□□□ -1.37
SRRM1-201ENST00000323848 MUC2Q02817 5179 aa6.49□□□□□ -1.37
SRRM1-201ENST00000323848 PKHD1L1Q86WI1 4243 aa6.48□□□□□ -1.37
SRRM1-201ENST00000323848 KRTAP10-10P60014 251 aa6.43□□□□□ -1.38
SRRM1-201ENST00000323848 KRTAP12-1P59990 96 aa6.43□□□□□ -1.38
SRRM1-201ENST00000323848 LORP23490 312 aaPredicted RBP6.42□□□□□ -1.38
SRRM1-201ENST00000323848 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
SRRM1-201ENST00000323848 HERC1Q15751 4861 aa6.38□□□□□ -1.39
SRRM1-201ENST00000323848 RNF213Q63HN8 5207 aa6.35□□□□□ -1.39
SRRM1-201ENST00000323848 TNXBP22105 4242 aa6.34□□□□□ -1.39
SRRM1-201ENST00000323848 PCLOQ9Y6V0 5065 aa6.29□□□□□ -1.4
SRRM1-201ENST00000323848 BIRC6Q9NR09 4857 aa6.22□□□□□ -1.41
SRRM1-201ENST00000323848 FAT4Q6V0I7 4981 aa6.21□□□□□ -1.42
SRRM1-201ENST00000323848 TNP1P09430 55 aa6.2□□□□□ -1.42
SRRM1-201ENST00000323848 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
SRRM1-201ENST00000323848 UBR4Q5T4S7 5183 aa6.15□□□□□ -1.42
SRRM1-201ENST00000323848 FSIP2Q5CZC0 6907 aa6.02□□□□□ -1.45
SRRM1-201ENST00000323848 MT1HP80294 61 aa5.91□□□□□ -1.46
SRRM1-201ENST00000323848 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
SRRM1-201ENST00000323848 HMCN2Q8NDA2 5059 aa5.83□□□□□ -1.48
SRRM1-201ENST00000323848 MT1FP04733 61 aa5.82□□□□□ -1.48
SRRM1-201ENST00000323848 MT2AP02795 61 aa5.8□□□□□ -1.48
SRRM1-201ENST00000323848 MUC17Q685J3 4493 aa5.75□□□□□ -1.49
SRRM1-201ENST00000323848 LCE2CQ5TA81 110 aa5.75□□□□□ -1.49
SRRM1-201ENST00000323848 KRTAP19-2Q3LHN2 52 aa5.74□□□□□ -1.49
SRRM1-201ENST00000323848 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
SRRM1-201ENST00000323848 FLGP20930 4061 aaPredicted RBP5.7□□□□□ -1.5
SRRM1-201ENST00000323848 LCE3AQ5TA76 89 aa5.67□□□□□ -1.5
SRRM1-201ENST00000323848 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
SRRM1-201ENST00000323848 USH2AO75445 5202 aa5.61□□□□□ -1.51
SRRM1-201ENST00000323848 SPRR2GQ9BYE4 73 aa5.59□□□□□ -1.51
SRRM1-201ENST00000323848 KRTAP10-12P60413 245 aa5.58□□□□□ -1.52
SRRM1-201ENST00000323848 KRTAP9-8Q9BYQ0 159 aa5.56□□□□□ -1.52
SRRM1-201ENST00000323848 KRTAP12-3P60328 96 aa5.45□□□□□ -1.54
SRRM1-201ENST00000323848 MT1BP07438 61 aa5.39□□□□□ -1.55
SRRM1-201ENST00000323848 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
SRRM1-201ENST00000323848 KMT2DO14686 5537 aa5.35□□□□□ -1.55
SRRM1-201ENST00000323848 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
SRRM1-201ENST00000323848 MT1XP80297 61 aa5.33□□□□□ -1.56
SRRM1-201ENST00000323848 KRTAP9-3Q9BYQ3 159 aa5.32□□□□□ -1.56
SRRM1-201ENST00000323848 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
SRRM1-201ENST00000323848 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
SRRM1-201ENST00000323848 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
SRRM1-201ENST00000323848 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
SRRM1-201ENST00000323848 LCE2BO14633 110 aa5.28□□□□□ -1.56
SRRM1-201ENST00000323848 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
SRRM1-201ENST00000323848 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
SRRM1-201ENST00000323848 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.57
SRRM1-201ENST00000323848 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
SRRM1-201ENST00000323848 KRTAP8-1Q8IUC2 63 aa5.12□□□□□ -1.59
SRRM1-201ENST00000323848 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
SRRM1-201ENST00000323848 INE1O15225 51 aa5.08□□□□□ -1.6
SRRM1-201ENST00000323848 LCE2AQ5TA79 106 aaPredicted RBP5.05□□□□□ -1.6
SRRM1-201ENST00000323848 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
SRRM1-201ENST00000323848 FCGBPQ9Y6R7 5405 aaPredicted RBP5.01□□□□□ -1.61
SRRM1-201ENST00000323848 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
SRRM1-201ENST00000323848 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
SRRM1-201ENST00000323848 MUC12Q9UKN1 5478 aa4.89□□□□□ -1.63
SRRM1-201ENST00000323848 SSPOA2VEC9 5147 aa4.86□□□□□ -1.63
SRRM1-201ENST00000323848 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
SRRM1-201ENST00000323848 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
SRRM1-201ENST00000323848 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms