RNA–Protein interactions for RNA: ENST00000323630.9

MTMR3-201, Transcript of myotubularin related protein 3, humanhuman

TSL 5 BASIC

Gene MTMR3, Length 5,866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR3-201ENST00000323630 KRTAP10-4P60372 401 aaPredicted RBP5.13□□□□□ -1.59
MTMR3-201ENST00000323630 COL7A1Q02388 2944 aa5.12□□□□□ -1.59
MTMR3-201ENST00000323630 ANK2Q01484 3957 aa5.11□□□□□ -1.59
MTMR3-201ENST00000323630 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
MTMR3-201ENST00000323630 SRRM2Q9UQ35 2752 aaKnown RBP5.1□□□□□ -1.59
MTMR3-201ENST00000323630 KRTAP4-5Q9BYR2 181 aa5.01□□□□□ -1.61
MTMR3-201ENST00000323630 DNAH10Q8IVF4 4471 aa4.96□□□□□ -1.62
MTMR3-201ENST00000323630 HUWE1Q7Z6Z7 4374 aaKnown RBP4.95□□□□□ -1.62
MTMR3-201ENST00000323630 FRAS1Q86XX4 4008 aa4.83□□□□□ -1.64
MTMR3-201ENST00000323630 DNAH7Q8WXX0 4024 aa4.82□□□□□ -1.64
MTMR3-201ENST00000323630 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
MTMR3-201ENST00000323630 ALMS1Q8TCU4 4167 aa4.79□□□□□ -1.64
MTMR3-201ENST00000323630 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
MTMR3-201ENST00000323630 CMYA5Q8N3K9 4069 aa4.79□□□□□ -1.64
MTMR3-201ENST00000323630 KRTAP19-5Q3LI72 72 aa4.79□□□□□ -1.64
MTMR3-201ENST00000323630 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
MTMR3-201ENST00000323630 DNAH9Q9NYC9 4486 aa4.75□□□□□ -1.65
MTMR3-201ENST00000323630 MT1HP80294 61 aa4.74□□□□□ -1.65
MTMR3-201ENST00000323630 MT2AP02795 61 aa4.73□□□□□ -1.65
MTMR3-201ENST00000323630 KRTAP4-1Q9BYQ7 146 aa4.72□□□□□ -1.65
MTMR3-201ENST00000323630 KRTAP19-4Q3LI73 84 aa4.72□□□□□ -1.65
MTMR3-201ENST00000323630 DNAH2Q9P225 4427 aa4.68□□□□□ -1.66
MTMR3-201ENST00000323630 SPRR2FQ96RM1 72 aa4.67□□□□□ -1.66
MTMR3-201ENST00000323630 DNAH11Q96DT5 4516 aa4.62□□□□□ -1.67
MTMR3-201ENST00000323630 MT1FP04733 61 aa4.61□□□□□ -1.67
MTMR3-201ENST00000323630 KMT2AQ03164 3969 aa4.59□□□□□ -1.67
MTMR3-201ENST00000323630 DNAH1Q9P2D7 4330 aa4.58□□□□□ -1.68
MTMR3-201ENST00000323630 DNAH5Q8TE73 4624 aa4.56□□□□□ -1.68
MTMR3-201ENST00000323630 PLECQ15149 4684 aaKnown RBP4.52□□□□□ -1.69
MTMR3-201ENST00000323630 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
MTMR3-201ENST00000323630 DNAH6Q9C0G6 4158 aa4.51□□□□□ -1.69
MTMR3-201ENST00000323630 HECTD4Q9Y4D8 3996 aa4.51□□□□□ -1.69
MTMR3-201ENST00000323630 DNAH8Q96JB1 4490 aa4.5□□□□□ -1.69
MTMR3-201ENST00000323630 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
MTMR3-201ENST00000323630 FAT1Q14517 4588 aa4.49□□□□□ -1.69
MTMR3-201ENST00000323630 DNAH17Q9UFH2 4485 aa4.48□□□□□ -1.69
MTMR3-201ENST00000323630 STARD9Q9P2P6 4700 aa4.44□□□□□ -1.7
MTMR3-201ENST00000323630 FAT2Q9NYQ8 4349 aa4.41□□□□□ -1.7
MTMR3-201ENST00000323630 VPS13DQ5THJ4 4388 aa4.39□□□□□ -1.71
MTMR3-201ENST00000323630 PRKDCP78527 4128 aaKnown RBP4.39□□□□□ -1.71
MTMR3-201ENST00000323630 KRTAP19-8Q3LI54 63 aa4.37□□□□□ -1.71
MTMR3-201ENST00000323630 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
MTMR3-201ENST00000323630 MT1GP13640 62 aa4.36□□□□□ -1.71
MTMR3-201ENST00000323630 DNAH3Q8TD57 4116 aa4.35□□□□□ -1.71
MTMR3-201ENST00000323630 SPRR2EP22531 72 aa4.35□□□□□ -1.71
MTMR3-201ENST00000323630 SPRR2BP35325 72 aa4.35□□□□□ -1.71
MTMR3-201ENST00000323630 SPRR2AP35326 72 aa4.35□□□□□ -1.71
MTMR3-201ENST00000323630 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
MTMR3-201ENST00000323630 KRTAP19-1Q8IUB9 90 aa4.31□□□□□ -1.72
MTMR3-201ENST00000323630 MT1XP80297 61 aa4.29□□□□□ -1.72
MTMR3-201ENST00000323630 HYDINQ4G0P3 5121 aa4.29□□□□□ -1.72
MTMR3-201ENST00000323630 VPS13BQ7Z7G8 4022 aa4.29□□□□□ -1.72
MTMR3-201ENST00000323630 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.72
MTMR3-201ENST00000323630 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.73
MTMR3-201ENST00000323630 SACSQ9NZJ4 4579 aa4.27□□□□□ -1.73
MTMR3-201ENST00000323630 DNHD1Q96M86 4753 aa4.26□□□□□ -1.73
MTMR3-201ENST00000323630 PKHD1P08F94 4074 aa4.25□□□□□ -1.73
MTMR3-201ENST00000323630 SPRR2DP22532 72 aa4.22□□□□□ -1.73
MTMR3-201ENST00000323630 LRP1Q07954 4544 aaKnown RBP4.21□□□□□ -1.73
MTMR3-201ENST00000323630 DYNC1H1Q14204 4646 aaKnown RBP4.21□□□□□ -1.74
MTMR3-201ENST00000323630 LCE2BO14633 110 aa4.21□□□□□ -1.74
MTMR3-201ENST00000323630 MYCBP2O75592 4640 aa4.19□□□□□ -1.74
MTMR3-201ENST00000323630 MT1BP07438 61 aa4.17□□□□□ -1.74
MTMR3-201ENST00000323630 FAT3Q8TDW7 4589 aa4.16□□□□□ -1.74
MTMR3-201ENST00000323630 APOBP04114 4563 aaKnown RBP4.15□□□□□ -1.75
MTMR3-201ENST00000323630 LPAP08519 4548 aa4.13□□□□□ -1.75
MTMR3-201ENST00000323630 DYNC2H1Q8NCM8 4307 aaKnown RBP4.12□□□□□ -1.75
MTMR3-201ENST00000323630 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
MTMR3-201ENST00000323630 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
MTMR3-201ENST00000323630 RYR1P21817 5038 aa4.1□□□□□ -1.75
MTMR3-201ENST00000323630 PKD1P98161 4303 aa4.06□□□□□ -1.76
MTMR3-201ENST00000323630 HERC1Q15751 4861 aa4.03□□□□□ -1.76
MTMR3-201ENST00000323630 KRTAP17-1Q9BYP8 105 aa4.03□□□□□ -1.76
MTMR3-201ENST00000323630 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
MTMR3-201ENST00000323630 HSPG2P98160 4391 aa4.01□□□□□ -1.77
MTMR3-201ENST00000323630 MT1LQ93083 61 aa4.01□□□□□ -1.77
MTMR3-201ENST00000323630 PRM1P04553 51 aa4□□□□□ -1.77
MTMR3-201ENST00000323630 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
MTMR3-201ENST00000323630 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
MTMR3-201ENST00000323630 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
MTMR3-201ENST00000323630 LCE2CQ5TA81 110 aa3.92□□□□□ -1.78
MTMR3-201ENST00000323630 RYR3Q15413 4870 aa3.91□□□□□ -1.78
MTMR3-201ENST00000323630 PKHD1L1Q86WI1 4243 aa3.9□□□□□ -1.78
MTMR3-201ENST00000323630 MT3P25713 68 aa3.9□□□□□ -1.78
MTMR3-201ENST00000323630 MT1EP04732 61 aa3.9□□□□□ -1.79
MTMR3-201ENST00000323630 KMT2CQ8NEZ4 4911 aaKnown RBP3.9□□□□□ -1.79
MTMR3-201ENST00000323630 LCE2DQ5TA82 110 aaPredicted RBP3.87□□□□□ -1.79
MTMR3-201ENST00000323630 MUC2Q02817 5179 aa3.85□□□□□ -1.79
MTMR3-201ENST00000323630 LRP2P98164 4655 aa3.83□□□□□ -1.8
MTMR3-201ENST00000323630 MT1MQ8N339 61 aa3.8□□□□□ -1.8
MTMR3-201ENST00000323630 EPPK1P58107 5090 aaKnown RBP3.78□□□□□ -1.8
MTMR3-201ENST00000323630 ABCA13Q86UQ4 5058 aa3.76□□□□□ -1.81
MTMR3-201ENST00000323630 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
MTMR3-201ENST00000323630 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
MTMR3-201ENST00000323630 RYR2Q92736 4967 aa3.74□□□□□ -1.81
MTMR3-201ENST00000323630 TNXBP22105 4242 aa3.72□□□□□ -1.81
MTMR3-201ENST00000323630 MT4P47944 62 aa3.72□□□□□ -1.81
MTMR3-201ENST00000323630 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
MTMR3-201ENST00000323630 KIAA1109Q2LD37 5005 aa3.7□□□□□ -1.82
MTMR3-201ENST00000323630 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms