RNA–Protein interactions for RNA: ENST00000317578.6

SIX5-201, Transcript of SIX homeobox 5, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SIX5, Length 3,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5-201ENST00000317578 MYCBP2O75592 4640 aa10.46□□□□□ -0.74
SIX5-201ENST00000317578 LRP1Q07954 4544 aaKnown RBP10.45□□□□□ -0.74
SIX5-201ENST00000317578 KIAA1109Q2LD37 5005 aa10.44□□□□□ -0.74
SIX5-201ENST00000317578 APOBP04114 4563 aaKnown RBP10.42□□□□□ -0.74
SIX5-201ENST00000317578 COX6B2Q6YFQ2 88 aa10.36□□□□□ -0.75
SIX5-201ENST00000317578 RYR2Q92736 4967 aa10.35□□□□□ -0.75
SIX5-201ENST00000317578 TPRXLQ17RH7 258 aa10.34□□□□□ -0.75
SIX5-201ENST00000317578 RYR3Q15413 4870 aa10.3□□□□□ -0.76
SIX5-201ENST00000317578 FAT3Q8TDW7 4589 aa10.28□□□□□ -0.76
SIX5-201ENST00000317578 RPL37P61927 97 aaKnown RBP10.27□□□□□ -0.76
SIX5-201ENST00000317578 KRTAP10-4P60372 401 aaPredicted RBP10.21□□□□□ -0.77
SIX5-201ENST00000317578 RYR1P21817 5038 aa10.18□□□□□ -0.78
SIX5-201ENST00000317578 KRTAP3-1Q9BYR8 98 aa10.17□□□□□ -0.78
SIX5-201ENST00000317578 KRTAP15-1Q3LI76 137 aa10.17□□□□□ -0.78
SIX5-201ENST00000317578 KRTAP17-1Q9BYP8 105 aa10.15□□□□□ -0.79
SIX5-201ENST00000317578 EPPK1P58107 5090 aaKnown RBP10.05□□□□□ -0.8
SIX5-201ENST00000317578 KRTAP4-5Q9BYR2 181 aa10.02□□□□□ -0.8
SIX5-201ENST00000317578 LUZP6Q538Z0 58 aa10.02□□□□□ -0.81
SIX5-201ENST00000317578 KRTAP13-4Q3LI77 160 aa10.01□□□□□ -0.81
SIX5-201ENST00000317578 J3QL48 77 aa10□□□□□ -0.81
SIX5-201ENST00000317578 RPS29P62273 56 aaKnown RBP9.99□□□□□ -0.81
SIX5-201ENST00000317578 KRTAP10-8P60410 259 aa9.98□□□□□ -0.81
SIX5-201ENST00000317578 HSPG2P98160 4391 aa9.97□□□□□ -0.81
SIX5-201ENST00000317578 S4R3F8 94 aa9.89□□□□□ -0.83
SIX5-201ENST00000317578 XP32Q5T750 250 aa9.88□□□□□ -0.83
SIX5-201ENST00000317578 KRTAP10-6P60371 365 aaPredicted RBP9.85□□□□□ -0.83
SIX5-201ENST00000317578 PKHD1L1Q86WI1 4243 aa9.85□□□□□ -0.83
SIX5-201ENST00000317578 LRP2P98164 4655 aa9.81□□□□□ -0.84
SIX5-201ENST00000317578 MT1HL1P0DM35 61 aa9.81□□□□□ -0.84
SIX5-201ENST00000317578 KRTAP12-2P59991 146 aa9.8□□□□□ -0.84
SIX5-201ENST00000317578 LPAP08519 4548 aa9.73□□□□□ -0.85
SIX5-201ENST00000317578 ABCA13Q86UQ4 5058 aa9.69□□□□□ -0.86
SIX5-201ENST00000317578 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
SIX5-201ENST00000317578 TNXBP22105 4242 aa9.61□□□□□ -0.87
SIX5-201ENST00000317578 KRTAP3-3Q9BYR6 98 aa9.61□□□□□ -0.87
SIX5-201ENST00000317578 HERC2O95714 4834 aa9.61□□□□□ -0.87
SIX5-201ENST00000317578 KRTAP12-1P59990 96 aa9.58□□□□□ -0.88
SIX5-201ENST00000317578 PLAC4Q8WY50 150 aa9.56□□□□□ -0.88
SIX5-201ENST00000317578 MUC2Q02817 5179 aa9.49□□□□□ -0.89
SIX5-201ENST00000317578 SEC61BP60468 96 aaKnown RBP9.36□□□□□ -0.91
SIX5-201ENST00000317578 HERC1Q15751 4861 aa9.34□□□□□ -0.91
SIX5-201ENST00000317578 M0QZ58 72 aa9.26□□□□□ -0.93
SIX5-201ENST00000317578 KRTAP4-1Q9BYQ7 146 aa9.2□□□□□ -0.94
SIX5-201ENST00000317578 R4GN34 69 aa9.16□□□□□ -0.94
SIX5-201ENST00000317578 RNF213Q63HN8 5207 aa9.15□□□□□ -0.95
SIX5-201ENST00000317578 PCLOQ9Y6V0 5065 aa9.14□□□□□ -0.95
SIX5-201ENST00000317578 BIRC6Q9NR09 4857 aa9.1□□□□□ -0.95
SIX5-201ENST00000317578 M0R2T5 61 aa9.08□□□□□ -0.96
SIX5-201ENST00000317578 FAT4Q6V0I7 4981 aa9.04□□□□□ -0.96
SIX5-201ENST00000317578 LORP23490 312 aaPredicted RBP8.95□□□□□ -0.98
SIX5-201ENST00000317578 CAMK2N1Q7Z7J9 78 aa8.94□□□□□ -0.98
SIX5-201ENST00000317578 UBR4Q5T4S7 5183 aa8.93□□□□□ -0.98
SIX5-201ENST00000317578 PP632Q6XCG6 107 aa8.79□□□□□ -1
SIX5-201ENST00000317578 HMCN2Q8NDA2 5059 aa8.67□□□□□ -1.02
SIX5-201ENST00000317578 MUC17Q685J3 4493 aa8.66□□□□□ -1.02
SIX5-201ENST00000317578 KRTAP10-10P60014 251 aa8.52□□□□□ -1.05
SIX5-201ENST00000317578 PRO2289Q9P1D8 64 aa8.51□□□□□ -1.05
SIX5-201ENST00000317578 TNP1P09430 55 aa8.47□□□□□ -1.05
SIX5-201ENST00000317578 KRTAP19-2Q3LHN2 52 aa8.46□□□□□ -1.06
SIX5-201ENST00000317578 FSIP2Q5CZC0 6907 aa8.42□□□□□ -1.06
SIX5-201ENST00000317578 FLGP20930 4061 aaPredicted RBP8.37□□□□□ -1.07
SIX5-201ENST00000317578 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
SIX5-201ENST00000317578 SPRR5A0A1B0GTR4 108 aa8.28□□□□□ -1.08
SIX5-201ENST00000317578 MT1HP80294 61 aa8.27□□□□□ -1.09
SIX5-201ENST00000317578 INE1O15225 51 aa8.14□□□□□ -1.11
SIX5-201ENST00000317578 MT1FP04733 61 aa8.13□□□□□ -1.11
SIX5-201ENST00000317578 MT2AP02795 61 aa8.08□□□□□ -1.12
SIX5-201ENST00000317578 USH2AO75445 5202 aa8.08□□□□□ -1.12
SIX5-201ENST00000317578 KRTAP19-1Q8IUB9 90 aa8.01□□□□□ -1.13
SIX5-201ENST00000317578 KRTAP23-1A1A580 65 aa7.97□□□□□ -1.13
SIX5-201ENST00000317578 KRTAP9-8Q9BYQ0 159 aa7.93□□□□□ -1.14
SIX5-201ENST00000317578 LCE3AQ5TA76 89 aa7.88□□□□□ -1.15
SIX5-201ENST00000317578 SPRR2GQ9BYE4 73 aa7.85□□□□□ -1.15
SIX5-201ENST00000317578 KMT2DO14686 5537 aa7.7□□□□□ -1.18
SIX5-201ENST00000317578 MT1BP07438 61 aa7.63□□□□□ -1.19
SIX5-201ENST00000317578 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
SIX5-201ENST00000317578 MT1XP80297 61 aa7.51□□□□□ -1.21
SIX5-201ENST00000317578 LCE2BO14633 110 aa7.5□□□□□ -1.21
SIX5-201ENST00000317578 KRTAP10-7P60409 375 aaPredicted RBP7.5□□□□□ -1.21
SIX5-201ENST00000317578 KRTAP10-5P60370 271 aa7.5□□□□□ -1.21
SIX5-201ENST00000317578 KRTAP10-12P60413 245 aa7.47□□□□□ -1.21
SIX5-201ENST00000317578 KRTAP19-8Q3LI54 63 aa7.46□□□□□ -1.21
SIX5-201ENST00000317578 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
SIX5-201ENST00000317578 KRTAP8-1Q8IUC2 63 aa7.42□□□□□ -1.22
SIX5-201ENST00000317578 OBSCNQ5VST9 7968 aa7.37□□□□□ -1.23
SIX5-201ENST00000317578 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
SIX5-201ENST00000317578 KRTAP4-8Q9BYQ9 185 aa7.34□□□□□ -1.23
SIX5-201ENST00000317578 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
SIX5-201ENST00000317578 KRTAP19-5Q3LI72 72 aa7.15□□□□□ -1.27
SIX5-201ENST00000317578 SSPOA2VEC9 5147 aa7.13□□□□□ -1.27
SIX5-201ENST00000317578 DSTQ03001 7570 aaKnown RBP7.11□□□□□ -1.27
SIX5-201ENST00000317578 MUC12Q9UKN1 5478 aa6.96□□□□□ -1.3
SIX5-201ENST00000317578 LCE3CQ5T5A8 94 aa6.95□□□□□ -1.3
SIX5-201ENST00000317578 KRTAP4-7Q9BYR0 210 aa6.94□□□□□ -1.3
SIX5-201ENST00000317578 FCGBPQ9Y6R7 5405 aaPredicted RBP6.85□□□□□ -1.31
SIX5-201ENST00000317578 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
SIX5-201ENST00000317578 KRTAP9-6A8MVA2 160 aa6.8□□□□□ -1.32
SIX5-201ENST00000317578 SYNE1Q8NF91 8797 aaKnown RBP6.77□□□□□ -1.33
SIX5-201ENST00000317578 SYNE2Q8WXH0 6885 aaKnown RBP6.67□□□□□ -1.34
SIX5-201ENST00000317578 KRTAP19-7Q3SYF9 63 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms