RNA–Protein interactions for RNA: ENST00000316341.7

SLC12A4-201, Transcript of solute carrier family 12 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC12A4, Length 4,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-201ENST00000316341 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
SLC12A4-201ENST00000316341 DNAH17Q9UFH2 4485 aa8.6□□□□□ -1.03
SLC12A4-201ENST00000316341 VPS13DQ5THJ4 4388 aa8.59□□□□□ -1.03
SLC12A4-201ENST00000316341 LRP1BQ9NZR2 4599 aa8.58□□□□□ -1.04
SLC12A4-201ENST00000316341 LYSTQ99698 3801 aa8.57□□□□□ -1.04
SLC12A4-201ENST00000316341 FAT1Q14517 4588 aa8.53□□□□□ -1.04
SLC12A4-201ENST00000316341 DNAH2Q9P225 4427 aa8.5□□□□□ -1.05
SLC12A4-201ENST00000316341 DNHD1Q96M86 4753 aa8.5□□□□□ -1.05
SLC12A4-201ENST00000316341 KMT2AQ03164 3969 aa8.5□□□□□ -1.05
SLC12A4-201ENST00000316341 FRAS1Q86XX4 4008 aa8.49□□□□□ -1.05
SLC12A4-201ENST00000316341 MT1HL1P0DM35 61 aa8.48□□□□□ -1.05
SLC12A4-201ENST00000316341 KRTAP10-10P60014 251 aa8.46□□□□□ -1.06
SLC12A4-201ENST00000316341 ALMS1Q8TCU4 4167 aa8.41□□□□□ -1.06
SLC12A4-201ENST00000316341 PRKDCP78527 4128 aaKnown RBP8.4□□□□□ -1.06
SLC12A4-201ENST00000316341 DNAH3Q8TD57 4116 aa8.38□□□□□ -1.07
SLC12A4-201ENST00000316341 DYNC1H1Q14204 4646 aaKnown RBP8.32□□□□□ -1.08
SLC12A4-201ENST00000316341 MYCBP2O75592 4640 aa8.3□□□□□ -1.08
SLC12A4-201ENST00000316341 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
SLC12A4-201ENST00000316341 DNAH7Q8WXX0 4024 aa8.29□□□□□ -1.08
SLC12A4-201ENST00000316341 VPS13BQ7Z7G8 4022 aa8.27□□□□□ -1.09
SLC12A4-201ENST00000316341 CMYA5Q8N3K9 4069 aa8.26□□□□□ -1.09
SLC12A4-201ENST00000316341 DNAH6Q9C0G6 4158 aa8.22□□□□□ -1.09
SLC12A4-201ENST00000316341 KRTAP4-5Q9BYR2 181 aa8.18□□□□□ -1.1
SLC12A4-201ENST00000316341 HECTD4Q9Y4D8 3996 aa8.17□□□□□ -1.1
SLC12A4-201ENST00000316341 SACSQ9NZJ4 4579 aa8.15□□□□□ -1.11
SLC12A4-201ENST00000316341 DYNC2H1Q8NCM8 4307 aaKnown RBP8.13□□□□□ -1.11
SLC12A4-201ENST00000316341 APOBP04114 4563 aaKnown RBP8.07□□□□□ -1.12
SLC12A4-201ENST00000316341 RYR1P21817 5038 aa8□□□□□ -1.13
SLC12A4-201ENST00000316341 LRP1Q07954 4544 aaKnown RBP7.98□□□□□ -1.13
SLC12A4-201ENST00000316341 PRO2289Q9P1D8 64 aa7.97□□□□□ -1.13
SLC12A4-201ENST00000316341 FAT2Q9NYQ8 4349 aa7.95□□□□□ -1.14
SLC12A4-201ENST00000316341 FAT3Q8TDW7 4589 aa7.92□□□□□ -1.14
SLC12A4-201ENST00000316341 HYDINQ4G0P3 5121 aa7.86□□□□□ -1.15
SLC12A4-201ENST00000316341 KRTAP4-1Q9BYQ7 146 aa7.86□□□□□ -1.15
SLC12A4-201ENST00000316341 KIAA1109Q2LD37 5005 aa7.84□□□□□ -1.15
SLC12A4-201ENST00000316341 PKHD1P08F94 4074 aa7.78□□□□□ -1.16
SLC12A4-201ENST00000316341 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
SLC12A4-201ENST00000316341 RYR3Q15413 4870 aa7.66□□□□□ -1.18
SLC12A4-201ENST00000316341 KRTAP10-12P60413 245 aa7.66□□□□□ -1.18
SLC12A4-201ENST00000316341 LRP2P98164 4655 aa7.66□□□□□ -1.18
SLC12A4-201ENST00000316341 KRTAP17-1Q9BYP8 105 aa7.62□□□□□ -1.19
SLC12A4-201ENST00000316341 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
SLC12A4-201ENST00000316341 KRTAP12-3P60328 96 aa7.61□□□□□ -1.19
SLC12A4-201ENST00000316341 INE1O15225 51 aa7.56□□□□□ -1.2
SLC12A4-201ENST00000316341 PKD1P98161 4303 aa7.45□□□□□ -1.22
SLC12A4-201ENST00000316341 KMT2CQ8NEZ4 4911 aaKnown RBP7.44□□□□□ -1.22
SLC12A4-201ENST00000316341 HSPG2P98160 4391 aa7.43□□□□□ -1.22
SLC12A4-201ENST00000316341 RYR2Q92736 4967 aa7.4□□□□□ -1.22
SLC12A4-201ENST00000316341 LPAP08519 4548 aa7.33□□□□□ -1.24
SLC12A4-201ENST00000316341 SPRR2GQ9BYE4 73 aa7.27□□□□□ -1.25
SLC12A4-201ENST00000316341 MT2AP02795 61 aa7.22□□□□□ -1.25
SLC12A4-201ENST00000316341 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
SLC12A4-201ENST00000316341 MT1HP80294 61 aa7.22□□□□□ -1.25
SLC12A4-201ENST00000316341 MT1FP04733 61 aa7.19□□□□□ -1.26
SLC12A4-201ENST00000316341 HERC2O95714 4834 aa7.15□□□□□ -1.26
SLC12A4-201ENST00000316341 PKHD1L1Q86WI1 4243 aa7.14□□□□□ -1.27
SLC12A4-201ENST00000316341 TNXBP22105 4242 aa7.11□□□□□ -1.27
SLC12A4-201ENST00000316341 KRTAP19-1Q8IUB9 90 aa7.1□□□□□ -1.27
SLC12A4-201ENST00000316341 KRTAP8-1Q8IUC2 63 aa7.05□□□□□ -1.28
SLC12A4-201ENST00000316341 KRTAP19-5Q3LI72 72 aa6.93□□□□□ -1.3
SLC12A4-201ENST00000316341 SPRR5A0A1B0GTR4 108 aa6.93□□□□□ -1.3
SLC12A4-201ENST00000316341 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.3
SLC12A4-201ENST00000316341 EPPK1P58107 5090 aaKnown RBP6.88□□□□□ -1.31
SLC12A4-201ENST00000316341 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
SLC12A4-201ENST00000316341 LCE3CQ5T5A8 94 aa6.81□□□□□ -1.32
SLC12A4-201ENST00000316341 MUC17Q685J3 4493 aa6.81□□□□□ -1.32
SLC12A4-201ENST00000316341 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
SLC12A4-201ENST00000316341 MT1XP80297 61 aa6.8□□□□□ -1.32
SLC12A4-201ENST00000316341 ABCA13Q86UQ4 5058 aa6.79□□□□□ -1.32
SLC12A4-201ENST00000316341 KRTAP19-8Q3LI54 63 aa6.76□□□□□ -1.33
SLC12A4-201ENST00000316341 LCE2CQ5TA81 110 aa6.76□□□□□ -1.33
SLC12A4-201ENST00000316341 MT1BP07438 61 aa6.73□□□□□ -1.33
SLC12A4-201ENST00000316341 MUC2Q02817 5179 aa6.72□□□□□ -1.33
SLC12A4-201ENST00000316341 PCLOQ9Y6V0 5065 aa6.71□□□□□ -1.34
SLC12A4-201ENST00000316341 HERC1Q15751 4861 aa6.71□□□□□ -1.34
SLC12A4-201ENST00000316341 KRTAP9-8Q9BYQ0 159 aa6.69□□□□□ -1.34
SLC12A4-201ENST00000316341 FLGP20930 4061 aaPredicted RBP6.68□□□□□ -1.34
SLC12A4-201ENST00000316341 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
SLC12A4-201ENST00000316341 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
SLC12A4-201ENST00000316341 FAT4Q6V0I7 4981 aa6.55□□□□□ -1.36
SLC12A4-201ENST00000316341 UBR4Q5T4S7 5183 aa6.53□□□□□ -1.36
SLC12A4-201ENST00000316341 BIRC6Q9NR09 4857 aa6.51□□□□□ -1.37
SLC12A4-201ENST00000316341 RNF213Q63HN8 5207 aa6.45□□□□□ -1.38
SLC12A4-201ENST00000316341 KRTAP9-3Q9BYQ3 159 aa6.43□□□□□ -1.38
SLC12A4-201ENST00000316341 HMCN2Q8NDA2 5059 aa6.42□□□□□ -1.38
SLC12A4-201ENST00000316341 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
SLC12A4-201ENST00000316341 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
SLC12A4-201ENST00000316341 MT1GP13640 62 aa6.24□□□□□ -1.41
SLC12A4-201ENST00000316341 SPRR2FQ96RM1 72 aa6.24□□□□□ -1.41
SLC12A4-201ENST00000316341 LCE2BO14633 110 aa6.22□□□□□ -1.41
SLC12A4-201ENST00000316341 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
SLC12A4-201ENST00000316341 LCE3BQ5TA77 95 aa6.15□□□□□ -1.43
SLC12A4-201ENST00000316341 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
SLC12A4-201ENST00000316341 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
SLC12A4-201ENST00000316341 MT1LQ93083 61 aa6.04□□□□□ -1.44
SLC12A4-201ENST00000316341 MT1EP04732 61 aa5.97□□□□□ -1.45
SLC12A4-201ENST00000316341 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
SLC12A4-201ENST00000316341 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.47
SLC12A4-201ENST00000316341 OBSCNQ5VST9 7968 aa5.87□□□□□ -1.47
SLC12A4-201ENST00000316341 KMT2DO14686 5537 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms