RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 KRTAP10-8P60410 259 aa9.39□□□□□ -0.91
CDK5R1-201ENST00000313401 HECTD4Q9Y4D8 3996 aa9.37□□□□□ -0.91
CDK5R1-201ENST00000313401 SEC61BP60468 96 aaKnown RBP9.36□□□□□ -0.91
CDK5R1-201ENST00000313401 VPS13BQ7Z7G8 4022 aa9.3□□□□□ -0.92
CDK5R1-201ENST00000313401 DYNC2H1Q8NCM8 4307 aaKnown RBP9.27□□□□□ -0.93
CDK5R1-201ENST00000313401 KRTAP10-4P60372 401 aaPredicted RBP9.27□□□□□ -0.93
CDK5R1-201ENST00000313401 DYNC1H1Q14204 4646 aaKnown RBP9.26□□□□□ -0.93
CDK5R1-201ENST00000313401 KRTAP13-4Q3LI77 160 aa9.23□□□□□ -0.93
CDK5R1-201ENST00000313401 MYCBP2O75592 4640 aa9.2□□□□□ -0.94
CDK5R1-201ENST00000313401 HYDINQ4G0P3 5121 aa9.18□□□□□ -0.94
CDK5R1-201ENST00000313401 KRTAP10-6P60371 365 aaPredicted RBP9.17□□□□□ -0.94
CDK5R1-201ENST00000313401 M0R2T5 61 aa9.14□□□□□ -0.95
CDK5R1-201ENST00000313401 KRTAP12-2P59991 146 aa9.12□□□□□ -0.95
CDK5R1-201ENST00000313401 TPRXLQ17RH7 258 aa9.09□□□□□ -0.95
CDK5R1-201ENST00000313401 PKHD1P08F94 4074 aa9.08□□□□□ -0.96
CDK5R1-201ENST00000313401 KRTAP3-3Q9BYR6 98 aa9.08□□□□□ -0.96
CDK5R1-201ENST00000313401 ALMS1Q8TCU4 4167 aa9.05□□□□□ -0.96
CDK5R1-201ENST00000313401 LRP1Q07954 4544 aaKnown RBP9.01□□□□□ -0.97
CDK5R1-201ENST00000313401 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
CDK5R1-201ENST00000313401 MT1HL1P0DM35 61 aa8.99□□□□□ -0.97
CDK5R1-201ENST00000313401 PLAC4Q8WY50 150 aa8.98□□□□□ -0.97
CDK5R1-201ENST00000313401 SACSQ9NZJ4 4579 aa8.97□□□□□ -0.97
CDK5R1-201ENST00000313401 KRTAP12-1P59990 96 aa8.96□□□□□ -0.98
CDK5R1-201ENST00000313401 FAT3Q8TDW7 4589 aa8.9□□□□□ -0.98
CDK5R1-201ENST00000313401 APOBP04114 4563 aaKnown RBP8.9□□□□□ -0.98
CDK5R1-201ENST00000313401 KIAA1109Q2LD37 5005 aa8.9□□□□□ -0.98
CDK5R1-201ENST00000313401 FAT2Q9NYQ8 4349 aa8.88□□□□□ -0.99
CDK5R1-201ENST00000313401 RYR1P21817 5038 aa8.86□□□□□ -0.99
CDK5R1-201ENST00000313401 KRTAP4-5Q9BYR2 181 aa8.85□□□□□ -0.99
CDK5R1-201ENST00000313401 PKD1P98161 4303 aa8.72□□□□□ -1.01
CDK5R1-201ENST00000313401 RYR3Q15413 4870 aa8.71□□□□□ -1.01
CDK5R1-201ENST00000313401 KMT2CQ8NEZ4 4911 aaKnown RBP8.67□□□□□ -1.02
CDK5R1-201ENST00000313401 KRTAP17-1Q9BYP8 105 aa8.63□□□□□ -1.03
CDK5R1-201ENST00000313401 TNP1P09430 55 aa8.61□□□□□ -1.03
CDK5R1-201ENST00000313401 RYR2Q92736 4967 aa8.57□□□□□ -1.04
CDK5R1-201ENST00000313401 LRP2P98164 4655 aa8.57□□□□□ -1.04
CDK5R1-201ENST00000313401 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
CDK5R1-201ENST00000313401 PP632Q6XCG6 107 aa8.53□□□□□ -1.04
CDK5R1-201ENST00000313401 HSPG2P98160 4391 aa8.45□□□□□ -1.06
CDK5R1-201ENST00000313401 KRTAP4-1Q9BYQ7 146 aa8.38□□□□□ -1.07
CDK5R1-201ENST00000313401 KRTAP10-10P60014 251 aa8.38□□□□□ -1.07
CDK5R1-201ENST00000313401 KRTAP15-1Q3LI76 137 aa8.35□□□□□ -1.07
CDK5R1-201ENST00000313401 LPAP08519 4548 aa8.29□□□□□ -1.08
CDK5R1-201ENST00000313401 PKHD1L1Q86WI1 4243 aa8.27□□□□□ -1.08
CDK5R1-201ENST00000313401 TNXBP22105 4242 aa8.13□□□□□ -1.11
CDK5R1-201ENST00000313401 HERC2O95714 4834 aa8.12□□□□□ -1.11
CDK5R1-201ENST00000313401 EPPK1P58107 5090 aaKnown RBP8.09□□□□□ -1.12
CDK5R1-201ENST00000313401 ABCA13Q86UQ4 5058 aa7.97□□□□□ -1.13
CDK5R1-201ENST00000313401 MUC2Q02817 5179 aa7.85□□□□□ -1.15
CDK5R1-201ENST00000313401 LCE3AQ5TA76 89 aa7.72□□□□□ -1.17
CDK5R1-201ENST00000313401 PRO2289Q9P1D8 64 aa7.68□□□□□ -1.18
CDK5R1-201ENST00000313401 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
CDK5R1-201ENST00000313401 HERC1Q15751 4861 aa7.6□□□□□ -1.19
CDK5R1-201ENST00000313401 MT1HP80294 61 aa7.6□□□□□ -1.19
CDK5R1-201ENST00000313401 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
CDK5R1-201ENST00000313401 KRTAP10-12P60413 245 aa7.54□□□□□ -1.2
CDK5R1-201ENST00000313401 MT2AP02795 61 aa7.54□□□□□ -1.2
CDK5R1-201ENST00000313401 MT1FP04733 61 aa7.54□□□□□ -1.2
CDK5R1-201ENST00000313401 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
CDK5R1-201ENST00000313401 KRTAP19-2Q3LHN2 52 aa7.52□□□□□ -1.21
CDK5R1-201ENST00000313401 SPRR2GQ9BYE4 73 aa7.51□□□□□ -1.21
CDK5R1-201ENST00000313401 MUC17Q685J3 4493 aa7.49□□□□□ -1.21
CDK5R1-201ENST00000313401 KRTAP19-1Q8IUB9 90 aa7.48□□□□□ -1.21
CDK5R1-201ENST00000313401 KRTAP12-3P60328 96 aa7.47□□□□□ -1.21
CDK5R1-201ENST00000313401 PCLOQ9Y6V0 5065 aa7.44□□□□□ -1.22
CDK5R1-201ENST00000313401 KRTAP23-1A1A580 65 aa7.43□□□□□ -1.22
CDK5R1-201ENST00000313401 FLGP20930 4061 aaPredicted RBP7.39□□□□□ -1.23
CDK5R1-201ENST00000313401 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
CDK5R1-201ENST00000313401 INE1O15225 51 aa7.36□□□□□ -1.23
CDK5R1-201ENST00000313401 UBR4Q5T4S7 5183 aa7.29□□□□□ -1.24
CDK5R1-201ENST00000313401 KRTAP9-8Q9BYQ0 159 aa7.18□□□□□ -1.26
CDK5R1-201ENST00000313401 HMCN2Q8NDA2 5059 aa7.14□□□□□ -1.27
CDK5R1-201ENST00000313401 KRTAP10-7P60409 375 aaPredicted RBP7.13□□□□□ -1.27
CDK5R1-201ENST00000313401 KRTAP8-1Q8IUC2 63 aa7.11□□□□□ -1.27
CDK5R1-201ENST00000313401 MT1BP07438 61 aa7.09□□□□□ -1.27
CDK5R1-201ENST00000313401 MT1XP80297 61 aa7.09□□□□□ -1.27
CDK5R1-201ENST00000313401 KRTAP10-5P60370 271 aa7.06□□□□□ -1.28
CDK5R1-201ENST00000313401 KRTAP19-8Q3LI54 63 aa7.05□□□□□ -1.28
CDK5R1-201ENST00000313401 CRCT1Q9UGL9 99 aa7.05□□□□□ -1.28
CDK5R1-201ENST00000313401 KRTAP19-5Q3LI72 72 aa6.99□□□□□ -1.29
CDK5R1-201ENST00000313401 FSIP2Q5CZC0 6907 aa6.98□□□□□ -1.29
CDK5R1-201ENST00000313401 SPRR5A0A1B0GTR4 108 aa6.94□□□□□ -1.3
CDK5R1-201ENST00000313401 KRTAP9-3Q9BYQ3 159 aa6.88□□□□□ -1.31
CDK5R1-201ENST00000313401 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
CDK5R1-201ENST00000313401 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
CDK5R1-201ENST00000313401 LCE3CQ5T5A8 94 aa6.76□□□□□ -1.33
CDK5R1-201ENST00000313401 USH2AO75445 5202 aa6.74□□□□□ -1.33
CDK5R1-201ENST00000313401 LCE2BO14633 110 aa6.72□□□□□ -1.33
CDK5R1-201ENST00000313401 KMT2DO14686 5537 aa6.61□□□□□ -1.35
CDK5R1-201ENST00000313401 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
CDK5R1-201ENST00000313401 SYNE1Q8NF91 8797 aaKnown RBP6.47□□□□□ -1.37
CDK5R1-201ENST00000313401 OBSCNQ5VST9 7968 aa6.32□□□□□ -1.4
CDK5R1-201ENST00000313401 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
CDK5R1-201ENST00000313401 SPRR2FQ96RM1 72 aa6.29□□□□□ -1.4
CDK5R1-201ENST00000313401 MT1GP13640 62 aa6.27□□□□□ -1.41
CDK5R1-201ENST00000313401 LCE2AQ5TA79 106 aaPredicted RBP6.26□□□□□ -1.41
CDK5R1-201ENST00000313401 MT1LQ93083 61 aa6.21□□□□□ -1.42
CDK5R1-201ENST00000313401 FCGBPQ9Y6R7 5405 aaPredicted RBP6.21□□□□□ -1.42
CDK5R1-201ENST00000313401 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.42
CDK5R1-201ENST00000313401 MT1EP04732 61 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms