RNA–Protein interactions for RNA: ENST00000309166.7

NRIP3-201, Transcript of nuclear receptor interacting protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NRIP3, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3-201ENST00000309166 CAMK2N1Q7Z7J9 78 aa6.95□□□□□ -1.3
NRIP3-201ENST00000309166 HECTD4Q9Y4D8 3996 aa6.92□□□□□ -1.3
NRIP3-201ENST00000309166 XP32Q5T750 250 aa6.89□□□□□ -1.31
NRIP3-201ENST00000309166 DNAH6Q9C0G6 4158 aa6.89□□□□□ -1.31
NRIP3-201ENST00000309166 VPS13BQ7Z7G8 4022 aa6.78□□□□□ -1.32
NRIP3-201ENST00000309166 Q5VSD8 79 aa6.76□□□□□ -1.33
NRIP3-201ENST00000309166 DNAH5Q8TE73 4624 aa6.74□□□□□ -1.33
NRIP3-201ENST00000309166 FAT1Q14517 4588 aa6.72□□□□□ -1.33
NRIP3-201ENST00000309166 PRKDCP78527 4128 aaKnown RBP6.71□□□□□ -1.33
NRIP3-201ENST00000309166 DYNC2H1Q8NCM8 4307 aaKnown RBP6.68□□□□□ -1.34
NRIP3-201ENST00000309166 MYCBP2O75592 4640 aa6.63□□□□□ -1.35
NRIP3-201ENST00000309166 KRTAP10-4P60372 401 aaPredicted RBP6.57□□□□□ -1.36
NRIP3-201ENST00000309166 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
NRIP3-201ENST00000309166 DYNC1H1Q14204 4646 aaKnown RBP6.53□□□□□ -1.36
NRIP3-201ENST00000309166 SACSQ9NZJ4 4579 aa6.52□□□□□ -1.37
NRIP3-201ENST00000309166 APOBP04114 4563 aaKnown RBP6.5□□□□□ -1.37
NRIP3-201ENST00000309166 A0A1B0GVY2 172 aa6.49□□□□□ -1.37
NRIP3-201ENST00000309166 TNP1P09430 55 aa6.47□□□□□ -1.37
NRIP3-201ENST00000309166 HYDINQ4G0P3 5121 aa6.46□□□□□ -1.38
NRIP3-201ENST00000309166 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
NRIP3-201ENST00000309166 SEC61BP60468 96 aaKnown RBP6.44□□□□□ -1.38
NRIP3-201ENST00000309166 FAT2Q9NYQ8 4349 aa6.43□□□□□ -1.38
NRIP3-201ENST00000309166 PKHD1P08F94 4074 aa6.42□□□□□ -1.38
NRIP3-201ENST00000309166 LRP1Q07954 4544 aaKnown RBP6.4□□□□□ -1.39
NRIP3-201ENST00000309166 DNHD1Q96M86 4753 aa6.36□□□□□ -1.39
NRIP3-201ENST00000309166 J3QL48 77 aa6.34□□□□□ -1.4
NRIP3-201ENST00000309166 PKD1P98161 4303 aa6.33□□□□□ -1.4
NRIP3-201ENST00000309166 HSPG2P98160 4391 aa6.3□□□□□ -1.4
NRIP3-201ENST00000309166 FAT3Q8TDW7 4589 aa6.27□□□□□ -1.41
NRIP3-201ENST00000309166 MT1HL1P0DM35 61 aa6.22□□□□□ -1.41
NRIP3-201ENST00000309166 LRP2P98164 4655 aa6.19□□□□□ -1.42
NRIP3-201ENST00000309166 M0R2T5 61 aa6.14□□□□□ -1.43
NRIP3-201ENST00000309166 PKHD1L1Q86WI1 4243 aa6.07□□□□□ -1.44
NRIP3-201ENST00000309166 KMT2CQ8NEZ4 4911 aaKnown RBP6.06□□□□□ -1.44
NRIP3-201ENST00000309166 LPAP08519 4548 aa6.06□□□□□ -1.44
NRIP3-201ENST00000309166 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
NRIP3-201ENST00000309166 RYR1P21817 5038 aa6□□□□□ -1.45
NRIP3-201ENST00000309166 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
NRIP3-201ENST00000309166 KRTAP4-1Q9BYQ7 146 aa5.96□□□□□ -1.45
NRIP3-201ENST00000309166 KRTAP17-1Q9BYP8 105 aa5.94□□□□□ -1.46
NRIP3-201ENST00000309166 TNXBP22105 4242 aa5.89□□□□□ -1.47
NRIP3-201ENST00000309166 INE1O15225 51 aa5.88□□□□□ -1.47
NRIP3-201ENST00000309166 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
NRIP3-201ENST00000309166 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
NRIP3-201ENST00000309166 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
NRIP3-201ENST00000309166 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
NRIP3-201ENST00000309166 RYR3Q15413 4870 aa5.81□□□□□ -1.48
NRIP3-201ENST00000309166 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
NRIP3-201ENST00000309166 RYR2Q92736 4967 aa5.75□□□□□ -1.49
NRIP3-201ENST00000309166 KRTAP21-3Q3LHN1 58 aa5.69□□□□□ -1.5
NRIP3-201ENST00000309166 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
NRIP3-201ENST00000309166 ABCA13Q86UQ4 5058 aa5.6□□□□□ -1.51
NRIP3-201ENST00000309166 MUC2Q02817 5179 aa5.55□□□□□ -1.52
NRIP3-201ENST00000309166 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
NRIP3-201ENST00000309166 EPPK1P58107 5090 aaKnown RBP5.51□□□□□ -1.53
NRIP3-201ENST00000309166 KRTAP19-2Q3LHN2 52 aa5.5□□□□□ -1.53
NRIP3-201ENST00000309166 SPRR2GQ9BYE4 73 aa5.47□□□□□ -1.53
NRIP3-201ENST00000309166 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.53
NRIP3-201ENST00000309166 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.54
NRIP3-201ENST00000309166 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
NRIP3-201ENST00000309166 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
NRIP3-201ENST00000309166 MT1FP04733 61 aa5.31□□□□□ -1.56
NRIP3-201ENST00000309166 HERC2O95714 4834 aa5.3□□□□□ -1.56
NRIP3-201ENST00000309166 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
NRIP3-201ENST00000309166 MT2AP02795 61 aa5.28□□□□□ -1.56
NRIP3-201ENST00000309166 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
NRIP3-201ENST00000309166 MT1HP80294 61 aa5.22□□□□□ -1.57
NRIP3-201ENST00000309166 KRTAP10-5P60370 271 aa5.2□□□□□ -1.58
NRIP3-201ENST00000309166 MT1XP80297 61 aa5.2□□□□□ -1.58
NRIP3-201ENST00000309166 HERC1Q15751 4861 aa5.18□□□□□ -1.58
NRIP3-201ENST00000309166 KRTAP19-5Q3LI72 72 aa5.17□□□□□ -1.58
NRIP3-201ENST00000309166 PCLOQ9Y6V0 5065 aa5.17□□□□□ -1.58
NRIP3-201ENST00000309166 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
NRIP3-201ENST00000309166 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
NRIP3-201ENST00000309166 MT1BP07438 61 aa5.11□□□□□ -1.59
NRIP3-201ENST00000309166 HMCN2Q8NDA2 5059 aa5.1□□□□□ -1.59
NRIP3-201ENST00000309166 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.6
NRIP3-201ENST00000309166 RNF213Q63HN8 5207 aa5.06□□□□□ -1.6
NRIP3-201ENST00000309166 KRTAP9-8Q9BYQ0 159 aa5.03□□□□□ -1.6
NRIP3-201ENST00000309166 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
NRIP3-201ENST00000309166 BIRC6Q9NR09 4857 aa5.01□□□□□ -1.61
NRIP3-201ENST00000309166 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
NRIP3-201ENST00000309166 CRCT1Q9UGL9 99 aa4.98□□□□□ -1.61
NRIP3-201ENST00000309166 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
NRIP3-201ENST00000309166 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
NRIP3-201ENST00000309166 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
NRIP3-201ENST00000309166 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
NRIP3-201ENST00000309166 KMT2DO14686 5537 aa4.83□□□□□ -1.64
NRIP3-201ENST00000309166 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
NRIP3-201ENST00000309166 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
NRIP3-201ENST00000309166 KRTAP12-4P60329 112 aa4.75□□□□□ -1.65
NRIP3-201ENST00000309166 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
NRIP3-201ENST00000309166 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
NRIP3-201ENST00000309166 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
NRIP3-201ENST00000309166 USH2AO75445 5202 aa4.7□□□□□ -1.66
NRIP3-201ENST00000309166 LCE2BO14633 110 aa4.62□□□□□ -1.67
NRIP3-201ENST00000309166 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.67
NRIP3-201ENST00000309166 MT1GP13640 62 aa4.59□□□□□ -1.67
NRIP3-201ENST00000309166 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
NRIP3-201ENST00000309166 KRTAP19-7Q3SYF9 63 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms