RNA–Protein interactions for RNA: ENST00000305031.4

CHSY3-201, Transcript of chondroitin sulfate synthase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHSY3, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHSY3-201ENST00000305031 VPS13BQ7Z7G8 4022 aa8.32□□□□□ -1.08
CHSY3-201ENST00000305031 DYNC2H1Q8NCM8 4307 aaKnown RBP8.32□□□□□ -1.08
CHSY3-201ENST00000305031 DYNC1H1Q14204 4646 aaKnown RBP8.29□□□□□ -1.08
CHSY3-201ENST00000305031 MYCBP2O75592 4640 aa8.27□□□□□ -1.09
CHSY3-201ENST00000305031 PKHD1P08F94 4074 aa8.26□□□□□ -1.09
CHSY3-201ENST00000305031 LUZP6Q538Z0 58 aa8.26□□□□□ -1.09
CHSY3-201ENST00000305031 KRTAP10-8P60410 259 aa8.26□□□□□ -1.09
CHSY3-201ENST00000305031 KRTAP13-4Q3LI77 160 aa8.22□□□□□ -1.09
CHSY3-201ENST00000305031 KRTAP10-4P60372 401 aaPredicted RBP8.21□□□□□ -1.1
CHSY3-201ENST00000305031 TPRXLQ17RH7 258 aa8.17□□□□□ -1.1
CHSY3-201ENST00000305031 SEC61BP60468 96 aaKnown RBP8.16□□□□□ -1.1
CHSY3-201ENST00000305031 KRTAP12-2P59991 146 aa8.14□□□□□ -1.11
CHSY3-201ENST00000305031 KIAA1109Q2LD37 5005 aa8.12□□□□□ -1.11
CHSY3-201ENST00000305031 LRP1Q07954 4544 aaKnown RBP8.12□□□□□ -1.11
CHSY3-201ENST00000305031 FAT3Q8TDW7 4589 aa8.07□□□□□ -1.12
CHSY3-201ENST00000305031 ALMS1Q8TCU4 4167 aa8.06□□□□□ -1.12
CHSY3-201ENST00000305031 SACSQ9NZJ4 4579 aa8.06□□□□□ -1.12
CHSY3-201ENST00000305031 KRTAP10-6P60371 365 aaPredicted RBP8.05□□□□□ -1.12
CHSY3-201ENST00000305031 KMT2CQ8NEZ4 4911 aaKnown RBP8.04□□□□□ -1.12
CHSY3-201ENST00000305031 M0R2T5 61 aa8.04□□□□□ -1.12
CHSY3-201ENST00000305031 APOBP04114 4563 aaKnown RBP8.04□□□□□ -1.12
CHSY3-201ENST00000305031 RYR1P21817 5038 aa8.02□□□□□ -1.13
CHSY3-201ENST00000305031 FAT2Q9NYQ8 4349 aa8.01□□□□□ -1.13
CHSY3-201ENST00000305031 KRTAP4-5Q9BYR2 181 aa7.99□□□□□ -1.13
CHSY3-201ENST00000305031 MT1HL1P0DM35 61 aa7.98□□□□□ -1.13
CHSY3-201ENST00000305031 RYR3Q15413 4870 aa7.96□□□□□ -1.14
CHSY3-201ENST00000305031 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
CHSY3-201ENST00000305031 KRTAP3-3Q9BYR6 98 aa7.91□□□□□ -1.14
CHSY3-201ENST00000305031 PKD1P98161 4303 aa7.89□□□□□ -1.15
CHSY3-201ENST00000305031 PLAC4Q8WY50 150 aa7.88□□□□□ -1.15
CHSY3-201ENST00000305031 KRTAP3-2Q9BYR7 98 aa7.86□□□□□ -1.15
CHSY3-201ENST00000305031 A0A0A0MQY5 61 aa7.85□□□□□ -1.15
CHSY3-201ENST00000305031 RYR2Q92736 4967 aa7.8□□□□□ -1.16
CHSY3-201ENST00000305031 KRTAP17-1Q9BYP8 105 aa7.8□□□□□ -1.16
CHSY3-201ENST00000305031 LRP2P98164 4655 aa7.69□□□□□ -1.18
CHSY3-201ENST00000305031 TNP1P09430 55 aa7.62□□□□□ -1.19
CHSY3-201ENST00000305031 KRTAP15-1Q3LI76 137 aa7.59□□□□□ -1.19
CHSY3-201ENST00000305031 HSPG2P98160 4391 aa7.58□□□□□ -1.2
CHSY3-201ENST00000305031 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
CHSY3-201ENST00000305031 EPPK1P58107 5090 aaKnown RBP7.49□□□□□ -1.21
CHSY3-201ENST00000305031 LPAP08519 4548 aa7.48□□□□□ -1.21
CHSY3-201ENST00000305031 PKHD1L1Q86WI1 4243 aa7.47□□□□□ -1.21
CHSY3-201ENST00000305031 HERC2O95714 4834 aa7.45□□□□□ -1.22
CHSY3-201ENST00000305031 KRTAP4-1Q9BYQ7 146 aa7.41□□□□□ -1.22
CHSY3-201ENST00000305031 PP632Q6XCG6 107 aa7.39□□□□□ -1.23
CHSY3-201ENST00000305031 KRTAP10-10P60014 251 aa7.33□□□□□ -1.24
CHSY3-201ENST00000305031 ABCA13Q86UQ4 5058 aa7.31□□□□□ -1.24
CHSY3-201ENST00000305031 TNXBP22105 4242 aa7.3□□□□□ -1.24
CHSY3-201ENST00000305031 MUC2Q02817 5179 aa7.22□□□□□ -1.25
CHSY3-201ENST00000305031 HERC1Q15751 4861 aa7.04□□□□□ -1.28
CHSY3-201ENST00000305031 RNF213Q63HN8 5207 aa6.97□□□□□ -1.29
CHSY3-201ENST00000305031 FAT4Q6V0I7 4981 aa6.94□□□□□ -1.3
CHSY3-201ENST00000305031 BIRC6Q9NR09 4857 aa6.92□□□□□ -1.3
CHSY3-201ENST00000305031 PCLOQ9Y6V0 5065 aa6.87□□□□□ -1.31
CHSY3-201ENST00000305031 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
CHSY3-201ENST00000305031 UBR4Q5T4S7 5183 aa6.76□□□□□ -1.33
CHSY3-201ENST00000305031 MT1HP80294 61 aa6.75□□□□□ -1.33
CHSY3-201ENST00000305031 KRTAP19-2Q3LHN2 52 aa6.66□□□□□ -1.34
CHSY3-201ENST00000305031 MT1FP04733 61 aa6.65□□□□□ -1.34
CHSY3-201ENST00000305031 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.35
CHSY3-201ENST00000305031 MT2AP02795 61 aa6.64□□□□□ -1.35
CHSY3-201ENST00000305031 MUC17Q685J3 4493 aa6.62□□□□□ -1.35
CHSY3-201ENST00000305031 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
CHSY3-201ENST00000305031 LCE2CQ5TA81 110 aa6.58□□□□□ -1.36
CHSY3-201ENST00000305031 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
CHSY3-201ENST00000305031 FLGP20930 4061 aaPredicted RBP6.57□□□□□ -1.36
CHSY3-201ENST00000305031 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
CHSY3-201ENST00000305031 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
CHSY3-201ENST00000305031 HMCN2Q8NDA2 5059 aa6.54□□□□□ -1.36
CHSY3-201ENST00000305031 FSIP2Q5CZC0 6907 aa6.51□□□□□ -1.37
CHSY3-201ENST00000305031 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
CHSY3-201ENST00000305031 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
CHSY3-201ENST00000305031 OBSCNQ5VST9 7968 aa6.34□□□□□ -1.39
CHSY3-201ENST00000305031 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
CHSY3-201ENST00000305031 INE1O15225 51 aa6.25□□□□□ -1.41
CHSY3-201ENST00000305031 KRTAP10-7P60409 375 aaPredicted RBP6.23□□□□□ -1.41
CHSY3-201ENST00000305031 MT1BP07438 61 aa6.23□□□□□ -1.41
CHSY3-201ENST00000305031 USH2AO75445 5202 aa6.2□□□□□ -1.42
CHSY3-201ENST00000305031 MT1XP80297 61 aa6.18□□□□□ -1.42
CHSY3-201ENST00000305031 KRTAP19-8Q3LI54 63 aa6.17□□□□□ -1.42
CHSY3-201ENST00000305031 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
CHSY3-201ENST00000305031 KRTAP8-1Q8IUC2 63 aa6.14□□□□□ -1.43
CHSY3-201ENST00000305031 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
CHSY3-201ENST00000305031 KRTAP9-3Q9BYQ3 159 aa6.11□□□□□ -1.43
CHSY3-201ENST00000305031 KMT2DO14686 5537 aa6.09□□□□□ -1.43
CHSY3-201ENST00000305031 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
CHSY3-201ENST00000305031 SPRR5A0A1B0GTR4 108 aa6.08□□□□□ -1.44
CHSY3-201ENST00000305031 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
CHSY3-201ENST00000305031 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
CHSY3-201ENST00000305031 LCE2BO14633 110 aa6□□□□□ -1.45
CHSY3-201ENST00000305031 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
CHSY3-201ENST00000305031 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
CHSY3-201ENST00000305031 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
CHSY3-201ENST00000305031 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
CHSY3-201ENST00000305031 LCE2AQ5TA79 106 aaPredicted RBP5.72□□□□□ -1.49
CHSY3-201ENST00000305031 SPRR2FQ96RM1 72 aa5.57□□□□□ -1.52
CHSY3-201ENST00000305031 MT1GP13640 62 aa5.57□□□□□ -1.52
CHSY3-201ENST00000305031 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
CHSY3-201ENST00000305031 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
CHSY3-201ENST00000305031 KRTAP9-6A8MVA2 160 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms