RNA–Protein interactions for RNA: ENST00000305031.4

CHSY3-201, Transcript of chondroitin sulfate synthase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHSY3, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHSY3-201ENST00000305031 NISCHQ9Y2I1 1504 aa30.58■■■□□ 2.49
CHSY3-201ENST00000305031 DCAF8L2P0C7V8 631 aa28.44■■■□□ 2.14
CHSY3-201ENST00000305031 SHROOM4Q9ULL8 1493 aa27.98■■■□□ 2.07
CHSY3-201ENST00000305031 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
CHSY3-201ENST00000305031 EHMT2Q96KQ7 1210 aa26.82■■□□□ 1.88
CHSY3-201ENST00000305031 PCGF6Q9BYE7 350 aa26.67■■□□□ 1.86
CHSY3-201ENST00000305031 PPARGC1BQ86YN6 1023 aaKnown RBP26.13■■□□□ 1.77
CHSY3-201ENST00000305031 FAM9AQ8IZU1 332 aaPredicted RBP26.11■■□□□ 1.77
CHSY3-201ENST00000305031 TTBK1Q5TCY1 1321 aaPredicted RBP25.91■■□□□ 1.74
CHSY3-201ENST00000305031 LOC105371045A0A1W2PR82 267 aa25.82■■□□□ 1.72
CHSY3-201ENST00000305031 HRCP23327 699 aa25.81■■□□□ 1.72
CHSY3-201ENST00000305031 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
CHSY3-201ENST00000305031 ZCCHC6Q5VYS8 1495 aaKnown RBP25.56■■□□□ 1.68
CHSY3-201ENST00000305031 TRIM41Q8WV44 630 aa25.52■■□□□ 1.68
CHSY3-201ENST00000305031 ABCC9O60706 1549 aa25.43■■□□□ 1.66
CHSY3-201ENST00000305031 CCDC180Q9P1Z9 1646 aa25.2■■□□□ 1.62
CHSY3-201ENST00000305031 CCER1Q8TC90 406 aaPredicted RBP25.07■■□□□ 1.6
CHSY3-201ENST00000305031 TRIM26Q12899 539 aaPredicted RBP25.07■■□□□ 1.6
CHSY3-201ENST00000305031 RANGAP1P46060 587 aaPredicted RBP25.05■■□□□ 1.6
CHSY3-201ENST00000305031 YTHDC1Q96MU7 727 aaKnown RBP25.03■■□□□ 1.6
CHSY3-201ENST00000305031 PABPN1Q86U42 306 aaKnown RBP eCLIP24.94■■□□□ 1.58
CHSY3-201ENST00000305031 SCRIBQ14160 1630 aa24.88■■□□□ 1.57
CHSY3-201ENST00000305031 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
CHSY3-201ENST00000305031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.83■■□□□ 1.57
CHSY3-201ENST00000305031 ZEB1P37275 1124 aaPredicted RBP24.8■■□□□ 1.56
CHSY3-201ENST00000305031 UBTFP17480 764 aaKnown RBP24.74■■□□□ 1.55
CHSY3-201ENST00000305031 CENPBP07199 599 aaPredicted RBP24.62■■□□□ 1.53
CHSY3-201ENST00000305031 PELP1Q8IZL8 1130 aaKnown RBP24.58■■□□□ 1.53
CHSY3-201ENST00000305031 RSF1Q96T23 1441 aaPredicted RBP24.48■■□□□ 1.51
CHSY3-201ENST00000305031 APLP2Q06481 763 aa24.47■■□□□ 1.51
CHSY3-201ENST00000305031 HNRNPUL2Q1KMD3 747 aaKnown RBP24.36■■□□□ 1.49
CHSY3-201ENST00000305031 GTF3C3Q9Y5Q9 886 aa24.34■■□□□ 1.49
CHSY3-201ENST00000305031 DCAF1Q9Y4B6 1507 aa24.32■■□□□ 1.48
CHSY3-201ENST00000305031 DIEXFQ68CQ4 756 aaKnown RBP24.3■■□□□ 1.48
CHSY3-201ENST00000305031 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
CHSY3-201ENST00000305031 CECR2Q9BXF3 1484 aa24.29■■□□□ 1.48
CHSY3-201ENST00000305031 ATP1B4Q9UN42 357 aaPredicted RBP24.12■■□□□ 1.45
CHSY3-201ENST00000305031 ITGAEP38570 1179 aa24.1■■□□□ 1.45
CHSY3-201ENST00000305031 NEUROD1Q13562 356 aa24.08■■□□□ 1.45
CHSY3-201ENST00000305031 ACIN1Q9UKV3 1341 aaKnown RBP24.01■■□□□ 1.43
CHSY3-201ENST00000305031 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
CHSY3-201ENST00000305031 NACADO15069 1562 aa23.98■■□□□ 1.43
CHSY3-201ENST00000305031 CSRNP3Q8WYN3 585 aa23.95■■□□□ 1.42
CHSY3-201ENST00000305031 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.42
CHSY3-201ENST00000305031 BCANQ96GW7 911 aa23.78■■□□□ 1.4
CHSY3-201ENST00000305031 WIZO95785 1651 aa23.68■■□□□ 1.38
CHSY3-201ENST00000305031 CNGB1Q14028 1251 aaPredicted RBP23.66■■□□□ 1.38
CHSY3-201ENST00000305031 ZNF316A6NFI3 1004 aaPredicted RBP23.61■■□□□ 1.37
CHSY3-201ENST00000305031 BAZ1AQ9NRL2 1556 aaPredicted RBP23.6■■□□□ 1.37
CHSY3-201ENST00000305031 ABCC8Q09428 1581 aa23.55■■□□□ 1.36
CHSY3-201ENST00000305031 SOGA1O94964 1423 aa23.54■■□□□ 1.36
CHSY3-201ENST00000305031 MYT1Q01538 1121 aa23.52■■□□□ 1.36
CHSY3-201ENST00000305031 MIER1Q8N108 512 aa23.51■■□□□ 1.35
CHSY3-201ENST00000305031 P3H3Q8IVL6 736 aa23.51■■□□□ 1.35
CHSY3-201ENST00000305031 CCDC88BA6NC98 1476 aa23.5■■□□□ 1.35
CHSY3-201ENST00000305031 ERICH6Q7L0X2 663 aa23.45■■□□□ 1.34
CHSY3-201ENST00000305031 NEFLP07196 543 aa23.44■■□□□ 1.34
CHSY3-201ENST00000305031 CEP162Q5TB80 1403 aa23.42■■□□□ 1.34
CHSY3-201ENST00000305031 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
CHSY3-201ENST00000305031 FAM50AQ14320 339 aaKnown RBP23.33■■□□□ 1.33
CHSY3-201ENST00000305031 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
CHSY3-201ENST00000305031 RUSC2Q8N2Y8 1516 aa23.25■■□□□ 1.31
CHSY3-201ENST00000305031 CLIP1P30622 1438 aa23.23■■□□□ 1.31
CHSY3-201ENST00000305031 POLR3GLQ9BT43 218 aa23.22■■□□□ 1.31
CHSY3-201ENST00000305031 HIRIP3Q9BW71 556 aaPredicted RBP23.21■■□□□ 1.31
CHSY3-201ENST00000305031 TNIKQ9UKE5 1360 aa23.19■■□□□ 1.3
CHSY3-201ENST00000305031 ARID3CA6NKF2 412 aa23.19■■□□□ 1.3
CHSY3-201ENST00000305031 TOP2AP11388 1531 aaKnown RBP23.15■■□□□ 1.3
CHSY3-201ENST00000305031 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
CHSY3-201ENST00000305031 GOLGA3Q08378 1498 aa23.15■■□□□ 1.3
CHSY3-201ENST00000305031 EEA1Q15075 1411 aa23.07■■□□□ 1.28
CHSY3-201ENST00000305031 DDX10Q13206 875 aaKnown RBP23.02■■□□□ 1.28
CHSY3-201ENST00000305031 FKBP8Q14318 412 aa23.02■■□□□ 1.28
CHSY3-201ENST00000305031 TRIM52Q96A61 297 aa23.02■■□□□ 1.28
CHSY3-201ENST00000305031 ATAD2BQ9ULI0 1458 aa22.99■■□□□ 1.27
CHSY3-201ENST00000305031 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
CHSY3-201ENST00000305031 SMARCA2P51531 1590 aa22.97■■□□□ 1.27
CHSY3-201ENST00000305031 IRX6P78412 446 aaPredicted RBP22.93■■□□□ 1.26
CHSY3-201ENST00000305031 FBLN2P98095 1184 aa22.92■■□□□ 1.26
CHSY3-201ENST00000305031 SENP3-EIF4A1A0A087X0R7 540 aa22.89■■□□□ 1.26
CHSY3-201ENST00000305031 KANK4Q5T7N3 995 aaPredicted RBP22.89■■□□□ 1.25
CHSY3-201ENST00000305031 RAPGEF2Q9Y4G8 1499 aa22.83■■□□□ 1.25
CHSY3-201ENST00000305031 KIF27Q86VH2 1401 aa22.83■■□□□ 1.25
CHSY3-201ENST00000305031 ANP32CO43423 234 aa22.74■■□□□ 1.23
CHSY3-201ENST00000305031 CUX2O14529 1486 aa22.73■■□□□ 1.23
CHSY3-201ENST00000305031 SUPT16HQ9Y5B9 1047 aaKnown RBP22.71■■□□□ 1.23
CHSY3-201ENST00000305031 VPS8Q8N3P4 1428 aa22.71■■□□□ 1.23
CHSY3-201ENST00000305031 CHIC2Q9UKJ5 165 aa22.71■■□□□ 1.23
CHSY3-201ENST00000305031 KCNH8Q96L42 1107 aa22.7■■□□□ 1.22
CHSY3-201ENST00000305031 ZNF326Q5BKZ1 582 aaKnown RBP22.69■■□□□ 1.22
CHSY3-201ENST00000305031 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
CHSY3-201ENST00000305031 SIN3AQ96ST3 1273 aa22.63■■□□□ 1.21
CHSY3-201ENST00000305031 BICRAQ9NZM4 1560 aa22.62■■□□□ 1.21
CHSY3-201ENST00000305031 HNRNPUQ00839 825 aaKnown RBP eCLIP22.62■■□□□ 1.21
CHSY3-201ENST00000305031 ZNF777Q9ULD5 760 aaPredicted RBP22.57■■□□□ 1.2
CHSY3-201ENST00000305031 SYNJ1O43426 1573 aa22.57■■□□□ 1.2
CHSY3-201ENST00000305031 CDK11AQ9UQ88 783 aaPredicted RBP22.56■■□□□ 1.2
CHSY3-201ENST00000305031 FAM9BQ8IZU0 186 aa22.53■■□□□ 1.2
CHSY3-201ENST00000305031 MTUS2Q5JR59 1369 aa22.53■■□□□ 1.2
CHSY3-201ENST00000305031 TDRD9Q8NDG6 1382 aaKnown RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms