RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 A0A1B0GVY2 172 aa8.95□□□□□ -0.98
CHRNA5-201ENST00000299565 KRTAP10-8P60410 259 aa8.95□□□□□ -0.98
CHRNA5-201ENST00000299565 LRP1Q07954 4544 aaKnown RBP8.89□□□□□ -0.99
CHRNA5-201ENST00000299565 KRTAP13-4Q3LI77 160 aa8.86□□□□□ -0.99
CHRNA5-201ENST00000299565 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
CHRNA5-201ENST00000299565 KMT2CQ8NEZ4 4911 aaKnown RBP8.85□□□□□ -0.99
CHRNA5-201ENST00000299565 M0QZ58 72 aa8.79□□□□□ -1
CHRNA5-201ENST00000299565 PKD1P98161 4303 aa8.79□□□□□ -1
CHRNA5-201ENST00000299565 FAT3Q8TDW7 4589 aa8.78□□□□□ -1
CHRNA5-201ENST00000299565 R4GN34 69 aa8.78□□□□□ -1
CHRNA5-201ENST00000299565 KRTAP10-6P60371 365 aaPredicted RBP8.78□□□□□ -1
CHRNA5-201ENST00000299565 SACSQ9NZJ4 4579 aa8.76□□□□□ -1.01
CHRNA5-201ENST00000299565 APOBP04114 4563 aaKnown RBP8.75□□□□□ -1.01
CHRNA5-201ENST00000299565 J3QL48 77 aa8.75□□□□□ -1.01
CHRNA5-201ENST00000299565 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
CHRNA5-201ENST00000299565 KRTAP12-2P59991 146 aa8.68□□□□□ -1.02
CHRNA5-201ENST00000299565 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.02
CHRNA5-201ENST00000299565 TPRXLQ17RH7 258 aa8.65□□□□□ -1.02
CHRNA5-201ENST00000299565 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
CHRNA5-201ENST00000299565 KRTAP21-3Q3LHN1 58 aa8.61□□□□□ -1.03
CHRNA5-201ENST00000299565 NDUFAF8A1L188 74 aa8.6□□□□□ -1.03
CHRNA5-201ENST00000299565 CAMK2N1Q7Z7J9 78 aa8.57□□□□□ -1.04
CHRNA5-201ENST00000299565 RYR1P21817 5038 aa8.54□□□□□ -1.04
CHRNA5-201ENST00000299565 KRTAP12-1P59990 96 aa8.5□□□□□ -1.05
CHRNA5-201ENST00000299565 HSPG2P98160 4391 aa8.49□□□□□ -1.05
CHRNA5-201ENST00000299565 MT1HL1P0DM35 61 aa8.48□□□□□ -1.05
CHRNA5-201ENST00000299565 SEC61BP60468 96 aaKnown RBP8.48□□□□□ -1.05
CHRNA5-201ENST00000299565 LRP2P98164 4655 aa8.46□□□□□ -1.05
CHRNA5-201ENST00000299565 RYR3Q15413 4870 aa8.46□□□□□ -1.06
CHRNA5-201ENST00000299565 KRTAP17-1Q9BYP8 105 aa8.4□□□□□ -1.06
CHRNA5-201ENST00000299565 RYR2Q92736 4967 aa8.39□□□□□ -1.07
CHRNA5-201ENST00000299565 KRTAP4-5Q9BYR2 181 aa8.35□□□□□ -1.07
CHRNA5-201ENST00000299565 PKHD1L1Q86WI1 4243 aa8.31□□□□□ -1.08
CHRNA5-201ENST00000299565 LPAP08519 4548 aa8.27□□□□□ -1.09
CHRNA5-201ENST00000299565 EPPK1P58107 5090 aaKnown RBP8.24□□□□□ -1.09
CHRNA5-201ENST00000299565 M0R2T5 61 aa8.2□□□□□ -1.1
CHRNA5-201ENST00000299565 LORP23490 312 aaPredicted RBP8.2□□□□□ -1.1
CHRNA5-201ENST00000299565 LUZP6Q538Z0 58 aa8.18□□□□□ -1.1
CHRNA5-201ENST00000299565 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
CHRNA5-201ENST00000299565 A0A0A0MQY5 61 aa8.13□□□□□ -1.11
CHRNA5-201ENST00000299565 PLAC4Q8WY50 150 aa8.12□□□□□ -1.11
CHRNA5-201ENST00000299565 TNXBP22105 4242 aa8.11□□□□□ -1.11
CHRNA5-201ENST00000299565 MUC2Q02817 5179 aa8.11□□□□□ -1.11
CHRNA5-201ENST00000299565 KRTAP15-1Q3LI76 137 aa8.06□□□□□ -1.12
CHRNA5-201ENST00000299565 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
CHRNA5-201ENST00000299565 TNP1P09430 55 aa7.9□□□□□ -1.14
CHRNA5-201ENST00000299565 HERC2O95714 4834 aa7.83□□□□□ -1.16
CHRNA5-201ENST00000299565 PP632Q6XCG6 107 aa7.76□□□□□ -1.17
CHRNA5-201ENST00000299565 HERC1Q15751 4861 aa7.75□□□□□ -1.17
CHRNA5-201ENST00000299565 RNF213Q63HN8 5207 aa7.74□□□□□ -1.17
CHRNA5-201ENST00000299565 FAT4Q6V0I7 4981 aa7.7□□□□□ -1.18
CHRNA5-201ENST00000299565 KRTAP10-10P60014 251 aa7.66□□□□□ -1.18
CHRNA5-201ENST00000299565 PCLOQ9Y6V0 5065 aa7.47□□□□□ -1.21
CHRNA5-201ENST00000299565 UBR4Q5T4S7 5183 aa7.46□□□□□ -1.22
CHRNA5-201ENST00000299565 MUC17Q685J3 4493 aa7.38□□□□□ -1.23
CHRNA5-201ENST00000299565 KRTAP19-2Q3LHN2 52 aa7.33□□□□□ -1.24
CHRNA5-201ENST00000299565 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
CHRNA5-201ENST00000299565 HMCN2Q8NDA2 5059 aa7.26□□□□□ -1.25
CHRNA5-201ENST00000299565 FLGP20930 4061 aaPredicted RBP7.23□□□□□ -1.25
CHRNA5-201ENST00000299565 BIRC6Q9NR09 4857 aa7.15□□□□□ -1.26
CHRNA5-201ENST00000299565 KRTAP19-1Q8IUB9 90 aa7.14□□□□□ -1.27
CHRNA5-201ENST00000299565 MT1HP80294 61 aa7.13□□□□□ -1.27
CHRNA5-201ENST00000299565 MT1FP04733 61 aa7.12□□□□□ -1.27
CHRNA5-201ENST00000299565 SPRR2GQ9BYE4 73 aa7.09□□□□□ -1.27
CHRNA5-201ENST00000299565 MT2AP02795 61 aa7.09□□□□□ -1.27
CHRNA5-201ENST00000299565 LCE2CQ5TA81 110 aa7.08□□□□□ -1.28
CHRNA5-201ENST00000299565 FSIP2Q5CZC0 6907 aa7.05□□□□□ -1.28
CHRNA5-201ENST00000299565 KRTAP10-12P60413 245 aa7□□□□□ -1.29
CHRNA5-201ENST00000299565 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
CHRNA5-201ENST00000299565 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
CHRNA5-201ENST00000299565 USH2AO75445 5202 aa6.95□□□□□ -1.3
CHRNA5-201ENST00000299565 PRO2289Q9P1D8 64 aa6.93□□□□□ -1.3
CHRNA5-201ENST00000299565 KRTAP9-8Q9BYQ0 159 aa6.83□□□□□ -1.32
CHRNA5-201ENST00000299565 KRTAP10-7P60409 375 aaPredicted RBP6.78□□□□□ -1.32
CHRNA5-201ENST00000299565 MT1BP07438 61 aa6.75□□□□□ -1.33
CHRNA5-201ENST00000299565 MT1XP80297 61 aa6.75□□□□□ -1.33
CHRNA5-201ENST00000299565 SPRR5A0A1B0GTR4 108 aa6.75□□□□□ -1.33
CHRNA5-201ENST00000299565 KRTAP10-5P60370 271 aa6.74□□□□□ -1.33
CHRNA5-201ENST00000299565 KRTAP8-1Q8IUC2 63 aa6.74□□□□□ -1.33
CHRNA5-201ENST00000299565 KMT2DO14686 5537 aa6.73□□□□□ -1.33
CHRNA5-201ENST00000299565 KRTAP19-8Q3LI54 63 aa6.65□□□□□ -1.34
CHRNA5-201ENST00000299565 KRTAP19-5Q3LI72 72 aa6.58□□□□□ -1.36
CHRNA5-201ENST00000299565 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
CHRNA5-201ENST00000299565 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
CHRNA5-201ENST00000299565 KRTAP9-3Q9BYQ3 159 aa6.52□□□□□ -1.37
CHRNA5-201ENST00000299565 INE1O15225 51 aa6.44□□□□□ -1.38
CHRNA5-201ENST00000299565 LCE2BO14633 110 aa6.39□□□□□ -1.39
CHRNA5-201ENST00000299565 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
CHRNA5-201ENST00000299565 LCE3CQ5T5A8 94 aa6.37□□□□□ -1.39
CHRNA5-201ENST00000299565 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
CHRNA5-201ENST00000299565 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
CHRNA5-201ENST00000299565 OBSCNQ5VST9 7968 aa6.21□□□□□ -1.42
CHRNA5-201ENST00000299565 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.42
CHRNA5-201ENST00000299565 FCGBPQ9Y6R7 5405 aaPredicted RBP6.09□□□□□ -1.43
CHRNA5-201ENST00000299565 KRTAP9-6A8MVA2 160 aa6.04□□□□□ -1.44
CHRNA5-201ENST00000299565 MUC12Q9UKN1 5478 aa5.98□□□□□ -1.45
CHRNA5-201ENST00000299565 KRTAP19-7Q3SYF9 63 aa5.96□□□□□ -1.46
CHRNA5-201ENST00000299565 SSPOA2VEC9 5147 aa5.9□□□□□ -1.46
CHRNA5-201ENST00000299565 LCE2AQ5TA79 106 aaPredicted RBP5.9□□□□□ -1.46
CHRNA5-201ENST00000299565 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms