RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 AKAP9Q99996 3911 aa7.1□□□□□ -1.27
CNTNAP3-201ENST00000297668 HUWE1Q7Z6Z7 4374 aaKnown RBP7.09□□□□□ -1.27
CNTNAP3-201ENST00000297668 CSMD3Q7Z407 3707 aa6.94□□□□□ -1.3
CNTNAP3-201ENST00000297668 DNAH5Q8TE73 4624 aa6.88□□□□□ -1.31
CNTNAP3-201ENST00000297668 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
CNTNAP3-201ENST00000297668 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
CNTNAP3-201ENST00000297668 KRTAP10-5P60370 271 aa6.8□□□□□ -1.32
CNTNAP3-201ENST00000297668 ALMS1Q8TCU4 4167 aa6.78□□□□□ -1.32
CNTNAP3-201ENST00000297668 KRTAP4-1Q9BYQ7 146 aa6.76□□□□□ -1.33
CNTNAP3-201ENST00000297668 DNAH10Q8IVF4 4471 aa6.73□□□□□ -1.33
CNTNAP3-201ENST00000297668 FAT1Q14517 4588 aa6.72□□□□□ -1.33
CNTNAP3-201ENST00000297668 DNAH9Q9NYC9 4486 aa6.71□□□□□ -1.34
CNTNAP3-201ENST00000297668 DNAH11Q96DT5 4516 aa6.65□□□□□ -1.35
CNTNAP3-201ENST00000297668 MT1HP80294 61 aa6.64□□□□□ -1.35
CNTNAP3-201ENST00000297668 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
CNTNAP3-201ENST00000297668 MT2AP02795 61 aa6.61□□□□□ -1.35
CNTNAP3-201ENST00000297668 DNAH1Q9P2D7 4330 aa6.61□□□□□ -1.35
CNTNAP3-201ENST00000297668 DNHD1Q96M86 4753 aa6.51□□□□□ -1.37
CNTNAP3-201ENST00000297668 DNAH2Q9P225 4427 aa6.5□□□□□ -1.37
CNTNAP3-201ENST00000297668 DNAH8Q96JB1 4490 aa6.49□□□□□ -1.37
CNTNAP3-201ENST00000297668 ANK2Q01484 3957 aa6.47□□□□□ -1.37
CNTNAP3-201ENST00000297668 MT1FP04733 61 aa6.47□□□□□ -1.37
CNTNAP3-201ENST00000297668 DYNC1H1Q14204 4646 aaKnown RBP6.47□□□□□ -1.37
CNTNAP3-201ENST00000297668 DNAH17Q9UFH2 4485 aa6.45□□□□□ -1.38
CNTNAP3-201ENST00000297668 RYR1P21817 5038 aa6.44□□□□□ -1.38
CNTNAP3-201ENST00000297668 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.38
CNTNAP3-201ENST00000297668 VPS13DQ5THJ4 4388 aa6.4□□□□□ -1.39
CNTNAP3-201ENST00000297668 SACSQ9NZJ4 4579 aa6.37□□□□□ -1.39
CNTNAP3-201ENST00000297668 LRP1BQ9NZR2 4599 aa6.37□□□□□ -1.39
CNTNAP3-201ENST00000297668 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.4
CNTNAP3-201ENST00000297668 LYSTQ99698 3801 aa6.31□□□□□ -1.4
CNTNAP3-201ENST00000297668 SPRR2FQ96RM1 72 aa6.3□□□□□ -1.4
CNTNAP3-201ENST00000297668 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
CNTNAP3-201ENST00000297668 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
CNTNAP3-201ENST00000297668 APOBP04114 4563 aaKnown RBP6.22□□□□□ -1.41
CNTNAP3-201ENST00000297668 STARD9Q9P2P6 4700 aa6.18□□□□□ -1.42
CNTNAP3-201ENST00000297668 FAT2Q9NYQ8 4349 aa6.17□□□□□ -1.42
CNTNAP3-201ENST00000297668 DYNC2H1Q8NCM8 4307 aaKnown RBP6.15□□□□□ -1.42
CNTNAP3-201ENST00000297668 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
CNTNAP3-201ENST00000297668 KRTAP19-8Q3LI54 63 aa6.13□□□□□ -1.43
CNTNAP3-201ENST00000297668 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
CNTNAP3-201ENST00000297668 DNAH7Q8WXX0 4024 aa6.09□□□□□ -1.43
CNTNAP3-201ENST00000297668 FRAS1Q86XX4 4008 aa6.06□□□□□ -1.44
CNTNAP3-201ENST00000297668 DNAH3Q8TD57 4116 aa6.06□□□□□ -1.44
CNTNAP3-201ENST00000297668 CMYA5Q8N3K9 4069 aa6.05□□□□□ -1.44
CNTNAP3-201ENST00000297668 KIAA1109Q2LD37 5005 aa6.03□□□□□ -1.44
CNTNAP3-201ENST00000297668 KMT2AQ03164 3969 aa6.03□□□□□ -1.44
CNTNAP3-201ENST00000297668 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
CNTNAP3-201ENST00000297668 RYR3Q15413 4870 aa6.02□□□□□ -1.45
CNTNAP3-201ENST00000297668 VPS13BQ7Z7G8 4022 aa6.01□□□□□ -1.45
CNTNAP3-201ENST00000297668 SPRR5A0A1B0GTR4 108 aa5.99□□□□□ -1.45
CNTNAP3-201ENST00000297668 LRP1Q07954 4544 aaKnown RBP5.98□□□□□ -1.45
CNTNAP3-201ENST00000297668 PRKDCP78527 4128 aaKnown RBP5.98□□□□□ -1.45
CNTNAP3-201ENST00000297668 MT1XP80297 61 aa5.98□□□□□ -1.45
CNTNAP3-201ENST00000297668 KRTAP17-1Q9BYP8 105 aa5.93□□□□□ -1.46
CNTNAP3-201ENST00000297668 MT1BP07438 61 aa5.9□□□□□ -1.46
CNTNAP3-201ENST00000297668 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
CNTNAP3-201ENST00000297668 DNAH6Q9C0G6 4158 aa5.86□□□□□ -1.47
CNTNAP3-201ENST00000297668 SPRR2EP22531 72 aa5.84□□□□□ -1.48
CNTNAP3-201ENST00000297668 SPRR2BP35325 72 aa5.84□□□□□ -1.48
CNTNAP3-201ENST00000297668 SPRR2AP35326 72 aa5.84□□□□□ -1.48
CNTNAP3-201ENST00000297668 HECTD4Q9Y4D8 3996 aa5.83□□□□□ -1.48
CNTNAP3-201ENST00000297668 KRTAP9-8Q9BYQ0 159 aa5.83□□□□□ -1.48
CNTNAP3-201ENST00000297668 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
CNTNAP3-201ENST00000297668 MT1GP13640 62 aa5.82□□□□□ -1.48
CNTNAP3-201ENST00000297668 RYR2Q92736 4967 aa5.81□□□□□ -1.48
CNTNAP3-201ENST00000297668 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
CNTNAP3-201ENST00000297668 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
CNTNAP3-201ENST00000297668 KRTAP9-3Q9BYQ3 159 aa5.7□□□□□ -1.5
CNTNAP3-201ENST00000297668 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
CNTNAP3-201ENST00000297668 HYDINQ4G0P3 5121 aa5.67□□□□□ -1.5
CNTNAP3-201ENST00000297668 LCE2BO14633 110 aa5.66□□□□□ -1.5
CNTNAP3-201ENST00000297668 HERC2O95714 4834 aa5.64□□□□□ -1.51
CNTNAP3-201ENST00000297668 SPRR2DP22532 72 aa5.64□□□□□ -1.51
CNTNAP3-201ENST00000297668 LRP2P98164 4655 aa5.64□□□□□ -1.51
CNTNAP3-201ENST00000297668 PKD1P98161 4303 aa5.62□□□□□ -1.51
CNTNAP3-201ENST00000297668 HERC1Q15751 4861 aa5.61□□□□□ -1.51
CNTNAP3-201ENST00000297668 PKHD1P08F94 4074 aa5.6□□□□□ -1.51
CNTNAP3-201ENST00000297668 LCE3DQ9BYE3 92 aa5.6□□□□□ -1.51
CNTNAP3-201ENST00000297668 PCLOQ9Y6V0 5065 aa5.58□□□□□ -1.52
CNTNAP3-201ENST00000297668 LCE3EQ5T5B0 92 aa5.52□□□□□ -1.53
CNTNAP3-201ENST00000297668 SYNE1Q8NF91 8797 aaKnown RBP5.52□□□□□ -1.53
CNTNAP3-201ENST00000297668 HSPG2P98160 4391 aa5.51□□□□□ -1.53
CNTNAP3-201ENST00000297668 KRTAP19-3Q7Z4W3 81 aa5.48□□□□□ -1.53
CNTNAP3-201ENST00000297668 MT1LQ93083 61 aa5.46□□□□□ -1.54
CNTNAP3-201ENST00000297668 KRTAP4-7Q9BYR0 210 aa5.46□□□□□ -1.54
CNTNAP3-201ENST00000297668 EPPK1P58107 5090 aaKnown RBP5.43□□□□□ -1.54
CNTNAP3-201ENST00000297668 BIRC6Q9NR09 4857 aa5.41□□□□□ -1.54
CNTNAP3-201ENST00000297668 MT1EP04732 61 aa5.4□□□□□ -1.55
CNTNAP3-201ENST00000297668 KRTAP19-2Q3LHN2 52 aa5.4□□□□□ -1.55
CNTNAP3-201ENST00000297668 KMT2CQ8NEZ4 4911 aaKnown RBP5.34□□□□□ -1.56
CNTNAP3-201ENST00000297668 MUC17Q685J3 4493 aa5.29□□□□□ -1.56
CNTNAP3-201ENST00000297668 LPAP08519 4548 aa5.26□□□□□ -1.57
CNTNAP3-201ENST00000297668 PKHD1L1Q86WI1 4243 aa5.24□□□□□ -1.57
CNTNAP3-201ENST00000297668 MT1MQ8N339 61 aa5.23□□□□□ -1.57
CNTNAP3-201ENST00000297668 ABCA13Q86UQ4 5058 aa5.2□□□□□ -1.58
CNTNAP3-201ENST00000297668 LCE2DQ5TA82 110 aaPredicted RBP5.19□□□□□ -1.58
CNTNAP3-201ENST00000297668 MT3P25713 68 aa5.17□□□□□ -1.58
CNTNAP3-201ENST00000297668 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
CNTNAP3-201ENST00000297668 KRTAP19-6Q3LI70 58 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms