RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
CNTNAP3-201ENST00000297668 SUPT5HO00267 1087 aaKnown RBP27.61■■■□□ 2.01
CNTNAP3-201ENST00000297668 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
CNTNAP3-201ENST00000297668 SHROOM4Q9ULL8 1493 aa26.95■■□□□ 1.91
CNTNAP3-201ENST00000297668 EHMT2Q96KQ7 1210 aa26.72■■□□□ 1.87
CNTNAP3-201ENST00000297668 PELP1Q8IZL8 1130 aaKnown RBP26.56■■□□□ 1.84
CNTNAP3-201ENST00000297668 APLP2Q06481 763 aa26.31■■□□□ 1.8
CNTNAP3-201ENST00000297668 MYT1Q01538 1121 aa26.18■■□□□ 1.78
CNTNAP3-201ENST00000297668 FAM9AQ8IZU1 332 aaPredicted RBP26.07■■□□□ 1.76
CNTNAP3-201ENST00000297668 PCGF6Q9BYE7 350 aa26.02■■□□□ 1.76
CNTNAP3-201ENST00000297668 TTBK1Q5TCY1 1321 aaPredicted RBP25.87■■□□□ 1.73
CNTNAP3-201ENST00000297668 CENPBP07199 599 aaPredicted RBP25.67■■□□□ 1.7
CNTNAP3-201ENST00000297668 ZEB1P37275 1124 aaPredicted RBP25.64■■□□□ 1.7
CNTNAP3-201ENST00000297668 TRIM41Q8WV44 630 aa25.55■■□□□ 1.68
CNTNAP3-201ENST00000297668 CCER1Q8TC90 406 aaPredicted RBP25.54■■□□□ 1.68
CNTNAP3-201ENST00000297668 RANGAP1P46060 587 aaPredicted RBP25.5■■□□□ 1.67
CNTNAP3-201ENST00000297668 ERICH6Q7L0X2 663 aa25.43■■□□□ 1.66
CNTNAP3-201ENST00000297668 ATP1B4Q9UN42 357 aaPredicted RBP25.28■■□□□ 1.64
CNTNAP3-201ENST00000297668 UBTFP17480 764 aaKnown RBP25.27■■□□□ 1.64
CNTNAP3-201ENST00000297668 NEFLP07196 543 aa25.09■■□□□ 1.61
CNTNAP3-201ENST00000297668 YTHDC1Q96MU7 727 aaKnown RBP25.05■■□□□ 1.6
CNTNAP3-201ENST00000297668 PPARGC1BQ86YN6 1023 aaKnown RBP24.9■■□□□ 1.58
CNTNAP3-201ENST00000297668 TRIM26Q12899 539 aaPredicted RBP24.86■■□□□ 1.57
CNTNAP3-201ENST00000297668 HRCP23327 699 aa24.68■■□□□ 1.54
CNTNAP3-201ENST00000297668 ITGAEP38570 1179 aa24.51■■□□□ 1.51
CNTNAP3-201ENST00000297668 LOC105371045A0A1W2PR82 267 aa24.5■■□□□ 1.51
CNTNAP3-201ENST00000297668 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
CNTNAP3-201ENST00000297668 HNRNPUL2Q1KMD3 747 aaKnown RBP24.39■■□□□ 1.5
CNTNAP3-201ENST00000297668 POLR3GLQ9BT43 218 aa24.37■■□□□ 1.49
CNTNAP3-201ENST00000297668 DAXXQ9UER7 740 aaPredicted RBP24.34■■□□□ 1.49
CNTNAP3-201ENST00000297668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.33■■□□□ 1.49
CNTNAP3-201ENST00000297668 MYT1LQ9UL68 1186 aa24.23■■□□□ 1.47
CNTNAP3-201ENST00000297668 CNGB1Q14028 1251 aaPredicted RBP24.15■■□□□ 1.46
CNTNAP3-201ENST00000297668 DIEXFQ68CQ4 756 aaKnown RBP24.08■■□□□ 1.45
CNTNAP3-201ENST00000297668 RTL5Q5HYW3 569 aaPredicted RBP23.84■■□□□ 1.41
CNTNAP3-201ENST00000297668 FAM50AQ14320 339 aaKnown RBP23.84■■□□□ 1.41
CNTNAP3-201ENST00000297668 SLC4A1APQ9BWU0 796 aaKnown RBP23.83■■□□□ 1.41
CNTNAP3-201ENST00000297668 CLSPNQ9HAW4 1339 aa23.81■■□□□ 1.4
CNTNAP3-201ENST00000297668 ZNF316A6NFI3 1004 aaPredicted RBP23.76■■□□□ 1.39
CNTNAP3-201ENST00000297668 TRIM52Q96A61 297 aa23.73■■□□□ 1.39
CNTNAP3-201ENST00000297668 NEUROD1Q13562 356 aa23.7■■□□□ 1.38
CNTNAP3-201ENST00000297668 GTF3C3Q9Y5Q9 886 aa23.64■■□□□ 1.38
CNTNAP3-201ENST00000297668 BCANQ96GW7 911 aa23.6■■□□□ 1.37
CNTNAP3-201ENST00000297668 ANP32CO43423 234 aa23.58■■□□□ 1.37
CNTNAP3-201ENST00000297668 PABPN1Q86U42 306 aaKnown RBP eCLIP23.5■■□□□ 1.35
CNTNAP3-201ENST00000297668 ZNF326Q5BKZ1 582 aaKnown RBP23.48■■□□□ 1.35
CNTNAP3-201ENST00000297668 CDK11AQ9UQ88 783 aaPredicted RBP23.46■■□□□ 1.35
CNTNAP3-201ENST00000297668 ABCC9O60706 1549 aa23.37■■□□□ 1.33
CNTNAP3-201ENST00000297668 ZBTB47Q9UFB7 747 aaPredicted RBP23.29■■□□□ 1.32
CNTNAP3-201ENST00000297668 ACIN1Q9UKV3 1341 aaKnown RBP23.29■■□□□ 1.32
CNTNAP3-201ENST00000297668 CSRNP3Q8WYN3 585 aa23.25■■□□□ 1.31
CNTNAP3-201ENST00000297668 FBLN2P98095 1184 aa23.2■■□□□ 1.3
CNTNAP3-201ENST00000297668 CANXP27824 592 aaKnown RBP23.19■■□□□ 1.3
CNTNAP3-201ENST00000297668 P3H3Q8IVL6 736 aa23.17■■□□□ 1.3
CNTNAP3-201ENST00000297668 ANP32AP39687 249 aaKnown RBP23.08■■□□□ 1.29
CNTNAP3-201ENST00000297668 NEFMP07197 916 aa23.08■■□□□ 1.28
CNTNAP3-201ENST00000297668 ARID3CA6NKF2 412 aa23.07■■□□□ 1.28
CNTNAP3-201ENST00000297668 BCL11AQ9H165 835 aa23.06■■□□□ 1.28
CNTNAP3-201ENST00000297668 SLC24A1O60721 1099 aa23■■□□□ 1.27
CNTNAP3-201ENST00000297668 ZNF777Q9ULD5 760 aaPredicted RBP22.99■■□□□ 1.27
CNTNAP3-201ENST00000297668 FKBP8Q14318 412 aa22.94■■□□□ 1.26
CNTNAP3-201ENST00000297668 NPM2Q86SE8 214 aaKnown RBP22.93■■□□□ 1.26
CNTNAP3-201ENST00000297668 TONSLQ96HA7 1378 aa22.92■■□□□ 1.26
CNTNAP3-201ENST00000297668 HNRNPUQ00839 825 aaKnown RBP eCLIP22.87■■□□□ 1.25
CNTNAP3-201ENST00000297668 DDX10Q13206 875 aaKnown RBP22.84■■□□□ 1.25
CNTNAP3-201ENST00000297668 DCAF1Q9Y4B6 1507 aa22.8■■□□□ 1.24
CNTNAP3-201ENST00000297668 FAM9BQ8IZU0 186 aa22.78■■□□□ 1.24
CNTNAP3-201ENST00000297668 HSP90AA1P07900 732 aaKnown RBP22.7■■□□□ 1.22
CNTNAP3-201ENST00000297668 GLIPR1L2Q4G1C9 344 aa22.69■■□□□ 1.22
CNTNAP3-201ENST00000297668 UPF2Q9HAU5 1272 aaKnown RBP22.69■■□□□ 1.22
CNTNAP3-201ENST00000297668 ANP32BQ92688 251 aaKnown RBP22.68■■□□□ 1.22
CNTNAP3-201ENST00000297668 EIF5BO60841 1220 aaKnown RBP22.68■■□□□ 1.22
CNTNAP3-201ENST00000297668 CHGAP10645 457 aaKnown RBP22.67■■□□□ 1.22
CNTNAP3-201ENST00000297668 SALL2Q9Y467 1007 aaPredicted RBP22.67■■□□□ 1.22
CNTNAP3-201ENST00000297668 TMC1Q8TDI8 760 aa22.65■■□□□ 1.22
CNTNAP3-201ENST00000297668 CCDC136Q96JN2 1154 aa22.64■■□□□ 1.21
CNTNAP3-201ENST00000297668 CHIC2Q9UKJ5 165 aa22.62■■□□□ 1.21
CNTNAP3-201ENST00000297668 ESF1Q9H501 851 aaKnown RBP22.61■■□□□ 1.21
CNTNAP3-201ENST00000297668 SCRIBQ14160 1630 aa22.6■■□□□ 1.21
CNTNAP3-201ENST00000297668 STAG3Q9UJ98 1225 aa22.57■■□□□ 1.2
CNTNAP3-201ENST00000297668 MRS2Q9HD23 443 aa22.57■■□□□ 1.2
CNTNAP3-201ENST00000297668 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.55■■□□□ 1.2
CNTNAP3-201ENST00000297668 MIER1Q8N108 512 aa22.52■■□□□ 1.2
CNTNAP3-201ENST00000297668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.5■■□□□ 1.19
CNTNAP3-201ENST00000297668 WDR43Q15061 677 aaKnown RBP eCLIP22.49■■□□□ 1.19
CNTNAP3-201ENST00000297668 TSPY4P0CV99 314 aa22.47■■□□□ 1.19
CNTNAP3-201ENST00000297668 TSPY10P0CW01 314 aa22.47■■□□□ 1.19
CNTNAP3-201ENST00000297668 NBR1Q14596 966 aa22.46■■□□□ 1.19
CNTNAP3-201ENST00000297668 ZCCHC6Q5VYS8 1495 aaKnown RBP22.45■■□□□ 1.18
CNTNAP3-201ENST00000297668 MTUS2Q5JR59 1369 aa22.45■■□□□ 1.18
CNTNAP3-201ENST00000297668 KDM2AQ9Y2K7 1162 aa22.45■■□□□ 1.18
CNTNAP3-201ENST00000297668 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
CNTNAP3-201ENST00000297668 NPM1P06748 294 aaKnown RBP eCLIP22.43■■□□□ 1.18
CNTNAP3-201ENST00000297668 HIRIP3Q9BW71 556 aaPredicted RBP22.41■■□□□ 1.18
CNTNAP3-201ENST00000297668 IRX6P78412 446 aaPredicted RBP22.4■■□□□ 1.18
CNTNAP3-201ENST00000297668 CLIP1P30622 1438 aa22.39■■□□□ 1.17
CNTNAP3-201ENST00000297668 EIF4G2P78344 907 aaKnown RBP eCLIP22.38■■□□□ 1.17
CNTNAP3-201ENST00000297668 ARXQ96QS3 562 aa22.31■■□□□ 1.16
CNTNAP3-201ENST00000297668 PLPPR3Q6T4P5 718 aa22.29■■□□□ 1.16
CNTNAP3-201ENST00000297668 RRP7BPQ9NSQ0 103 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms