RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 DNAH9Q9NYC9 4486 aa6.71□□□□□ -1.34
SHROOM4-201ENST00000289292 DNAH1Q9P2D7 4330 aa6.71□□□□□ -1.34
SHROOM4-201ENST00000289292 KRTAP10-12P60413 245 aa6.71□□□□□ -1.34
SHROOM4-201ENST00000289292 CRCT1Q9UGL9 99 aa6.71□□□□□ -1.34
SHROOM4-201ENST00000289292 LCE3AQ5TA76 89 aa6.66□□□□□ -1.34
SHROOM4-201ENST00000289292 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
SHROOM4-201ENST00000289292 PLECQ15149 4684 aaKnown RBP6.53□□□□□ -1.36
SHROOM4-201ENST00000289292 DNAH3Q8TD57 4116 aa6.51□□□□□ -1.37
SHROOM4-201ENST00000289292 DNAH2Q9P225 4427 aa6.5□□□□□ -1.37
SHROOM4-201ENST00000289292 DNAH17Q9UFH2 4485 aa6.43□□□□□ -1.38
SHROOM4-201ENST00000289292 ANK2Q01484 3957 aa6.42□□□□□ -1.38
SHROOM4-201ENST00000289292 DNAH5Q8TE73 4624 aa6.42□□□□□ -1.38
SHROOM4-201ENST00000289292 DNAH11Q96DT5 4516 aa6.41□□□□□ -1.38
SHROOM4-201ENST00000289292 FRAS1Q86XX4 4008 aa6.4□□□□□ -1.38
SHROOM4-201ENST00000289292 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
SHROOM4-201ENST00000289292 DNAH8Q96JB1 4490 aa6.38□□□□□ -1.39
SHROOM4-201ENST00000289292 VPS13DQ5THJ4 4388 aa6.37□□□□□ -1.39
SHROOM4-201ENST00000289292 KRTAP4-1Q9BYQ7 146 aa6.31□□□□□ -1.4
SHROOM4-201ENST00000289292 STARD9Q9P2P6 4700 aa6.29□□□□□ -1.4
SHROOM4-201ENST00000289292 KMT2AQ03164 3969 aa6.25□□□□□ -1.41
SHROOM4-201ENST00000289292 KRTAP10-5P60370 271 aa6.21□□□□□ -1.41
SHROOM4-201ENST00000289292 CMYA5Q8N3K9 4069 aa6.18□□□□□ -1.42
SHROOM4-201ENST00000289292 LRP1BQ9NZR2 4599 aa6.18□□□□□ -1.42
SHROOM4-201ENST00000289292 VPS13BQ7Z7G8 4022 aa6.17□□□□□ -1.42
SHROOM4-201ENST00000289292 DYNC2H1Q8NCM8 4307 aaKnown RBP6.16□□□□□ -1.42
SHROOM4-201ENST00000289292 FAT2Q9NYQ8 4349 aa6.16□□□□□ -1.42
SHROOM4-201ENST00000289292 LYSTQ99698 3801 aa6.14□□□□□ -1.43
SHROOM4-201ENST00000289292 SACSQ9NZJ4 4579 aa6.13□□□□□ -1.43
SHROOM4-201ENST00000289292 FAT1Q14517 4588 aa6.09□□□□□ -1.43
SHROOM4-201ENST00000289292 DYNC1H1Q14204 4646 aaKnown RBP6.08□□□□□ -1.44
SHROOM4-201ENST00000289292 PRKDCP78527 4128 aaKnown RBP6.07□□□□□ -1.44
SHROOM4-201ENST00000289292 MT1HP80294 61 aa6.05□□□□□ -1.44
SHROOM4-201ENST00000289292 KRTAP8-1Q8IUC2 63 aa6.03□□□□□ -1.44
SHROOM4-201ENST00000289292 DNAH7Q8WXX0 4024 aa5.99□□□□□ -1.45
SHROOM4-201ENST00000289292 DNAH6Q9C0G6 4158 aa5.97□□□□□ -1.45
SHROOM4-201ENST00000289292 HECTD4Q9Y4D8 3996 aa5.97□□□□□ -1.45
SHROOM4-201ENST00000289292 MT2AP02795 61 aa5.97□□□□□ -1.45
SHROOM4-201ENST00000289292 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
SHROOM4-201ENST00000289292 KRTAP19-5Q3LI72 72 aa5.92□□□□□ -1.46
SHROOM4-201ENST00000289292 MT1FP04733 61 aa5.91□□□□□ -1.46
SHROOM4-201ENST00000289292 APOBP04114 4563 aaKnown RBP5.91□□□□□ -1.46
SHROOM4-201ENST00000289292 DNHD1Q96M86 4753 aa5.81□□□□□ -1.48
SHROOM4-201ENST00000289292 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
SHROOM4-201ENST00000289292 KRTAP17-1Q9BYP8 105 aa5.73□□□□□ -1.49
SHROOM4-201ENST00000289292 RYR1P21817 5038 aa5.73□□□□□ -1.49
SHROOM4-201ENST00000289292 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
SHROOM4-201ENST00000289292 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
SHROOM4-201ENST00000289292 FAT3Q8TDW7 4589 aa5.69□□□□□ -1.5
SHROOM4-201ENST00000289292 LRP1Q07954 4544 aaKnown RBP5.63□□□□□ -1.51
SHROOM4-201ENST00000289292 SPRR2FQ96RM1 72 aa5.6□□□□□ -1.51
SHROOM4-201ENST00000289292 KRTAP19-1Q8IUB9 90 aa5.58□□□□□ -1.52
SHROOM4-201ENST00000289292 LPAP08519 4548 aa5.52□□□□□ -1.53
SHROOM4-201ENST00000289292 MT1XP80297 61 aa5.51□□□□□ -1.53
SHROOM4-201ENST00000289292 RYR3Q15413 4870 aa5.48□□□□□ -1.53
SHROOM4-201ENST00000289292 HYDINQ4G0P3 5121 aa5.46□□□□□ -1.53
SHROOM4-201ENST00000289292 HSPG2P98160 4391 aa5.46□□□□□ -1.54
SHROOM4-201ENST00000289292 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
SHROOM4-201ENST00000289292 PKHD1P08F94 4074 aa5.44□□□□□ -1.54
SHROOM4-201ENST00000289292 KRTAP19-8Q3LI54 63 aa5.44□□□□□ -1.54
SHROOM4-201ENST00000289292 PKD1P98161 4303 aa5.43□□□□□ -1.54
SHROOM4-201ENST00000289292 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
SHROOM4-201ENST00000289292 MT1GP13640 62 aa5.4□□□□□ -1.54
SHROOM4-201ENST00000289292 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
SHROOM4-201ENST00000289292 MT1BP07438 61 aa5.39□□□□□ -1.55
SHROOM4-201ENST00000289292 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
SHROOM4-201ENST00000289292 PKHD1L1Q86WI1 4243 aa5.38□□□□□ -1.55
SHROOM4-201ENST00000289292 KRTAP12-4P60329 112 aa5.37□□□□□ -1.55
SHROOM4-201ENST00000289292 TNXBP22105 4242 aa5.36□□□□□ -1.55
SHROOM4-201ENST00000289292 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
SHROOM4-201ENST00000289292 LRP2P98164 4655 aa5.3□□□□□ -1.56
SHROOM4-201ENST00000289292 RYR2Q92736 4967 aa5.23□□□□□ -1.57
SHROOM4-201ENST00000289292 LCE2CQ5TA81 110 aa5.22□□□□□ -1.57
SHROOM4-201ENST00000289292 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
SHROOM4-201ENST00000289292 SPRR2EP22531 72 aa5.21□□□□□ -1.58
SHROOM4-201ENST00000289292 SPRR2BP35325 72 aa5.21□□□□□ -1.58
SHROOM4-201ENST00000289292 SPRR2AP35326 72 aa5.21□□□□□ -1.58
SHROOM4-201ENST00000289292 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
SHROOM4-201ENST00000289292 KIAA1109Q2LD37 5005 aa5.16□□□□□ -1.58
SHROOM4-201ENST00000289292 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
SHROOM4-201ENST00000289292 KMT2CQ8NEZ4 4911 aaKnown RBP5.11□□□□□ -1.59
SHROOM4-201ENST00000289292 LCE3DQ9BYE3 92 aa5.03□□□□□ -1.6
SHROOM4-201ENST00000289292 SPRR2DP22532 72 aa5□□□□□ -1.61
SHROOM4-201ENST00000289292 KRTAP19-2Q3LHN2 52 aa4.99□□□□□ -1.61
SHROOM4-201ENST00000289292 LCE2BO14633 110 aa4.99□□□□□ -1.61
SHROOM4-201ENST00000289292 FLGP20930 4061 aaPredicted RBP4.98□□□□□ -1.61
SHROOM4-201ENST00000289292 MT1LQ93083 61 aa4.96□□□□□ -1.62
SHROOM4-201ENST00000289292 HERC1Q15751 4861 aa4.96□□□□□ -1.62
SHROOM4-201ENST00000289292 LCE3EQ5T5B0 92 aa4.95□□□□□ -1.62
SHROOM4-201ENST00000289292 HERC2O95714 4834 aa4.94□□□□□ -1.62
SHROOM4-201ENST00000289292 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
SHROOM4-201ENST00000289292 MUC17Q685J3 4493 aa4.93□□□□□ -1.62
SHROOM4-201ENST00000289292 MT1EP04732 61 aa4.89□□□□□ -1.63
SHROOM4-201ENST00000289292 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
SHROOM4-201ENST00000289292 KRTAP4-3Q9BYR4 195 aa4.85□□□□□ -1.63
SHROOM4-201ENST00000289292 PRM1P04553 51 aa4.82□□□□□ -1.64
SHROOM4-201ENST00000289292 MT1MQ8N339 61 aa4.73□□□□□ -1.65
SHROOM4-201ENST00000289292 PCLOQ9Y6V0 5065 aa4.67□□□□□ -1.66
SHROOM4-201ENST00000289292 BIRC6Q9NR09 4857 aa4.65□□□□□ -1.66
SHROOM4-201ENST00000289292 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
SHROOM4-201ENST00000289292 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms