RNA–Protein interactions for RNA: ENST00000288828.8

WIPI2-201, Transcript of WD repeat domain, phosphoinositide interacting 2, humanhuman

TSL 1 (best) BASIC

Gene WIPI2, Length 4,476 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI2-201ENST00000288828 DNHD1Q96M86 4753 aa8.05□□□□□ -1.12
WIPI2-201ENST00000288828 KRTAP4-5Q9BYR2 181 aa8.02□□□□□ -1.13
WIPI2-201ENST00000288828 VPS13DQ5THJ4 4388 aa7.91□□□□□ -1.14
WIPI2-201ENST00000288828 KRTAP15-1Q3LI76 137 aa7.89□□□□□ -1.15
WIPI2-201ENST00000288828 STARD9Q9P2P6 4700 aa7.87□□□□□ -1.15
WIPI2-201ENST00000288828 DNAH17Q9UFH2 4485 aa7.87□□□□□ -1.15
WIPI2-201ENST00000288828 FAT1Q14517 4588 aa7.86□□□□□ -1.15
WIPI2-201ENST00000288828 ALMS1Q8TCU4 4167 aa7.8□□□□□ -1.16
WIPI2-201ENST00000288828 LRP1BQ9NZR2 4599 aa7.79□□□□□ -1.16
WIPI2-201ENST00000288828 LORP23490 312 aaPredicted RBP7.77□□□□□ -1.17
WIPI2-201ENST00000288828 DYNC1H1Q14204 4646 aaKnown RBP7.76□□□□□ -1.17
WIPI2-201ENST00000288828 DNAH8Q96JB1 4490 aa7.73□□□□□ -1.17
WIPI2-201ENST00000288828 DNAH2Q9P225 4427 aa7.71□□□□□ -1.17
WIPI2-201ENST00000288828 PRKDCP78527 4128 aaKnown RBP7.7□□□□□ -1.18
WIPI2-201ENST00000288828 KMT2AQ03164 3969 aa7.6□□□□□ -1.19
WIPI2-201ENST00000288828 RYR1P21817 5038 aa7.59□□□□□ -1.19
WIPI2-201ENST00000288828 ANK2Q01484 3957 aa7.55□□□□□ -1.2
WIPI2-201ENST00000288828 DNAH3Q8TD57 4116 aa7.54□□□□□ -1.2
WIPI2-201ENST00000288828 MYCBP2O75592 4640 aa7.53□□□□□ -1.2
WIPI2-201ENST00000288828 KRTAP10-12P60413 245 aa7.52□□□□□ -1.2
WIPI2-201ENST00000288828 LYSTQ99698 3801 aa7.52□□□□□ -1.21
WIPI2-201ENST00000288828 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.21
WIPI2-201ENST00000288828 SACSQ9NZJ4 4579 aa7.51□□□□□ -1.21
WIPI2-201ENST00000288828 DYNC2H1Q8NCM8 4307 aaKnown RBP7.5□□□□□ -1.21
WIPI2-201ENST00000288828 KRTAP23-1A1A580 65 aa7.45□□□□□ -1.22
WIPI2-201ENST00000288828 KIAA1109Q2LD37 5005 aa7.45□□□□□ -1.22
WIPI2-201ENST00000288828 VPS13BQ7Z7G8 4022 aa7.44□□□□□ -1.22
WIPI2-201ENST00000288828 FAT2Q9NYQ8 4349 aa7.42□□□□□ -1.22
WIPI2-201ENST00000288828 LCE3AQ5TA76 89 aa7.41□□□□□ -1.22
WIPI2-201ENST00000288828 APOBP04114 4563 aaKnown RBP7.4□□□□□ -1.23
WIPI2-201ENST00000288828 KRTAP12-3P60328 96 aa7.4□□□□□ -1.23
WIPI2-201ENST00000288828 FRAS1Q86XX4 4008 aa7.32□□□□□ -1.24
WIPI2-201ENST00000288828 LRP1Q07954 4544 aaKnown RBP7.28□□□□□ -1.24
WIPI2-201ENST00000288828 DNAH6Q9C0G6 4158 aa7.26□□□□□ -1.25
WIPI2-201ENST00000288828 RYR3Q15413 4870 aa7.25□□□□□ -1.25
WIPI2-201ENST00000288828 FAT3Q8TDW7 4589 aa7.24□□□□□ -1.25
WIPI2-201ENST00000288828 INE1O15225 51 aa7.23□□□□□ -1.25
WIPI2-201ENST00000288828 CMYA5Q8N3K9 4069 aa7.19□□□□□ -1.26
WIPI2-201ENST00000288828 HECTD4Q9Y4D8 3996 aa7.18□□□□□ -1.26
WIPI2-201ENST00000288828 DNAH7Q8WXX0 4024 aa7.17□□□□□ -1.26
WIPI2-201ENST00000288828 KRTAP17-1Q9BYP8 105 aa7.17□□□□□ -1.26
WIPI2-201ENST00000288828 MT1HP80294 61 aa7.13□□□□□ -1.27
WIPI2-201ENST00000288828 SPRR2GQ9BYE4 73 aa7.12□□□□□ -1.27
WIPI2-201ENST00000288828 MT2AP02795 61 aa7.09□□□□□ -1.27
WIPI2-201ENST00000288828 CRCT1Q9UGL9 99 aa7.04□□□□□ -1.28
WIPI2-201ENST00000288828 HYDINQ4G0P3 5121 aa7.03□□□□□ -1.28
WIPI2-201ENST00000288828 MT1FP04733 61 aa6.99□□□□□ -1.29
WIPI2-201ENST00000288828 LRP2P98164 4655 aa6.99□□□□□ -1.29
WIPI2-201ENST00000288828 RYR2Q92736 4967 aa6.99□□□□□ -1.29
WIPI2-201ENST00000288828 PKHD1P08F94 4074 aa6.96□□□□□ -1.29
WIPI2-201ENST00000288828 HERC2O95714 4834 aa6.86□□□□□ -1.31
WIPI2-201ENST00000288828 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
WIPI2-201ENST00000288828 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
WIPI2-201ENST00000288828 HSPG2P98160 4391 aa6.72□□□□□ -1.33
WIPI2-201ENST00000288828 KMT2CQ8NEZ4 4911 aaKnown RBP6.7□□□□□ -1.34
WIPI2-201ENST00000288828 KRTAP19-5Q3LI72 72 aa6.67□□□□□ -1.34
WIPI2-201ENST00000288828 PKD1P98161 4303 aa6.66□□□□□ -1.34
WIPI2-201ENST00000288828 KRTAP19-8Q3LI54 63 aa6.65□□□□□ -1.34
WIPI2-201ENST00000288828 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
WIPI2-201ENST00000288828 LPAP08519 4548 aa6.58□□□□□ -1.36
WIPI2-201ENST00000288828 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
WIPI2-201ENST00000288828 LCE3CQ5T5A8 94 aa6.55□□□□□ -1.36
WIPI2-201ENST00000288828 LCE2CQ5TA81 110 aa6.53□□□□□ -1.36
WIPI2-201ENST00000288828 MT1XP80297 61 aa6.52□□□□□ -1.36
WIPI2-201ENST00000288828 KRTAP9-8Q9BYQ0 159 aa6.51□□□□□ -1.37
WIPI2-201ENST00000288828 PCLOQ9Y6V0 5065 aa6.5□□□□□ -1.37
WIPI2-201ENST00000288828 MT1BP07438 61 aa6.5□□□□□ -1.37
WIPI2-201ENST00000288828 HERC1Q15751 4861 aa6.45□□□□□ -1.38
WIPI2-201ENST00000288828 BIRC6Q9NR09 4857 aa6.45□□□□□ -1.38
WIPI2-201ENST00000288828 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
WIPI2-201ENST00000288828 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.39
WIPI2-201ENST00000288828 TNXBP22105 4242 aa6.37□□□□□ -1.39
WIPI2-201ENST00000288828 PKHD1L1Q86WI1 4243 aa6.36□□□□□ -1.39
WIPI2-201ENST00000288828 MUC17Q685J3 4493 aa6.35□□□□□ -1.39
WIPI2-201ENST00000288828 SPRR2FQ96RM1 72 aa6.31□□□□□ -1.4
WIPI2-201ENST00000288828 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
WIPI2-201ENST00000288828 KRTAP19-4Q3LI73 84 aa6.3□□□□□ -1.4
WIPI2-201ENST00000288828 EPPK1P58107 5090 aaKnown RBP6.29□□□□□ -1.4
WIPI2-201ENST00000288828 ABCA13Q86UQ4 5058 aa6.29□□□□□ -1.4
WIPI2-201ENST00000288828 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
WIPI2-201ENST00000288828 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
WIPI2-201ENST00000288828 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
WIPI2-201ENST00000288828 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
WIPI2-201ENST00000288828 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
WIPI2-201ENST00000288828 LCE2BO14633 110 aa6.05□□□□□ -1.44
WIPI2-201ENST00000288828 MT1GP13640 62 aa6□□□□□ -1.45
WIPI2-201ENST00000288828 FAT4Q6V0I7 4981 aa5.98□□□□□ -1.45
WIPI2-201ENST00000288828 RNF213Q63HN8 5207 aa5.97□□□□□ -1.45
WIPI2-201ENST00000288828 HMCN2Q8NDA2 5059 aa5.94□□□□□ -1.46
WIPI2-201ENST00000288828 MUC2Q02817 5179 aa5.93□□□□□ -1.46
WIPI2-201ENST00000288828 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
WIPI2-201ENST00000288828 KRTAP4-7Q9BYR0 210 aa5.93□□□□□ -1.46
WIPI2-201ENST00000288828 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
WIPI2-201ENST00000288828 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
WIPI2-201ENST00000288828 MT1LQ93083 61 aa5.85□□□□□ -1.47
WIPI2-201ENST00000288828 MT1EP04732 61 aa5.8□□□□□ -1.48
WIPI2-201ENST00000288828 SPRR2EP22531 72 aa5.77□□□□□ -1.49
WIPI2-201ENST00000288828 SPRR2BP35325 72 aa5.77□□□□□ -1.49
WIPI2-201ENST00000288828 SPRR2AP35326 72 aa5.77□□□□□ -1.49
WIPI2-201ENST00000288828 KRTAP19-3Q7Z4W3 81 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms