RNA–Protein interactions for RNA: ENST00000282344.10

USP12-201, Transcript of ubiquitin specific peptidase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP12, Length 4,511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-201ENST00000282344 DNHD1Q96M86 4753 aa9.95□□□□□ -0.82
USP12-201ENST00000282344 KRTAP15-1Q3LI76 137 aa9.93□□□□□ -0.82
USP12-201ENST00000282344 KRTAP4-5Q9BYR2 181 aa9.84□□□□□ -0.83
USP12-201ENST00000282344 FAT1Q14517 4588 aa9.77□□□□□ -0.84
USP12-201ENST00000282344 STARD9Q9P2P6 4700 aa9.76□□□□□ -0.85
USP12-201ENST00000282344 VPS13DQ5THJ4 4388 aa9.73□□□□□ -0.85
USP12-201ENST00000282344 DNAH17Q9UFH2 4485 aa9.7□□□□□ -0.86
USP12-201ENST00000282344 LORP23490 312 aaPredicted RBP9.69□□□□□ -0.86
USP12-201ENST00000282344 DNAH8Q96JB1 4490 aa9.69□□□□□ -0.86
USP12-201ENST00000282344 LRP1BQ9NZR2 4599 aa9.68□□□□□ -0.86
USP12-201ENST00000282344 DNAH2Q9P225 4427 aa9.59□□□□□ -0.87
USP12-201ENST00000282344 DYNC1H1Q14204 4646 aaKnown RBP9.59□□□□□ -0.87
USP12-201ENST00000282344 PRKDCP78527 4128 aaKnown RBP9.5□□□□□ -0.89
USP12-201ENST00000282344 ALMS1Q8TCU4 4167 aa9.48□□□□□ -0.89
USP12-201ENST00000282344 KMT2AQ03164 3969 aa9.47□□□□□ -0.89
USP12-201ENST00000282344 MYCBP2O75592 4640 aa9.45□□□□□ -0.9
USP12-201ENST00000282344 LYSTQ99698 3801 aa9.44□□□□□ -0.9
USP12-201ENST00000282344 ANK2Q01484 3957 aa9.42□□□□□ -0.9
USP12-201ENST00000282344 RYR1P21817 5038 aa9.39□□□□□ -0.91
USP12-201ENST00000282344 DNAH3Q8TD57 4116 aa9.3□□□□□ -0.92
USP12-201ENST00000282344 SACSQ9NZJ4 4579 aa9.28□□□□□ -0.92
USP12-201ENST00000282344 KRTAP10-12P60413 245 aa9.28□□□□□ -0.92
USP12-201ENST00000282344 KRTAP4-1Q9BYQ7 146 aa9.28□□□□□ -0.92
USP12-201ENST00000282344 VPS13BQ7Z7G8 4022 aa9.26□□□□□ -0.93
USP12-201ENST00000282344 LCE3AQ5TA76 89 aa9.21□□□□□ -0.93
USP12-201ENST00000282344 KIAA1109Q2LD37 5005 aa9.2□□□□□ -0.94
USP12-201ENST00000282344 DYNC2H1Q8NCM8 4307 aaKnown RBP9.2□□□□□ -0.94
USP12-201ENST00000282344 FRAS1Q86XX4 4008 aa9.19□□□□□ -0.94
USP12-201ENST00000282344 APOBP04114 4563 aaKnown RBP9.18□□□□□ -0.94
USP12-201ENST00000282344 KRTAP12-3P60328 96 aa9.16□□□□□ -0.94
USP12-201ENST00000282344 KRTAP23-1A1A580 65 aa9.14□□□□□ -0.95
USP12-201ENST00000282344 FAT2Q9NYQ8 4349 aa9.11□□□□□ -0.95
USP12-201ENST00000282344 LRP1Q07954 4544 aaKnown RBP9.08□□□□□ -0.96
USP12-201ENST00000282344 FAT3Q8TDW7 4589 aa9.07□□□□□ -0.96
USP12-201ENST00000282344 DNAH6Q9C0G6 4158 aa9.06□□□□□ -0.96
USP12-201ENST00000282344 INE1O15225 51 aa9.01□□□□□ -0.97
USP12-201ENST00000282344 DNAH7Q8WXX0 4024 aa8.99□□□□□ -0.97
USP12-201ENST00000282344 HECTD4Q9Y4D8 3996 aa8.96□□□□□ -0.97
USP12-201ENST00000282344 CMYA5Q8N3K9 4069 aa8.94□□□□□ -0.98
USP12-201ENST00000282344 RYR3Q15413 4870 aa8.93□□□□□ -0.98
USP12-201ENST00000282344 KRTAP17-1Q9BYP8 105 aa8.84□□□□□ -0.99
USP12-201ENST00000282344 CRCT1Q9UGL9 99 aa8.79□□□□□ -1
USP12-201ENST00000282344 LRP2P98164 4655 aa8.73□□□□□ -1.01
USP12-201ENST00000282344 HYDINQ4G0P3 5121 aa8.72□□□□□ -1.01
USP12-201ENST00000282344 SPRR2GQ9BYE4 73 aa8.72□□□□□ -1.01
USP12-201ENST00000282344 MT1HP80294 61 aa8.72□□□□□ -1.01
USP12-201ENST00000282344 MT2AP02795 61 aa8.7□□□□□ -1.02
USP12-201ENST00000282344 PKHD1P08F94 4074 aa8.65□□□□□ -1.02
USP12-201ENST00000282344 MT1FP04733 61 aa8.6□□□□□ -1.03
USP12-201ENST00000282344 RYR2Q92736 4967 aa8.54□□□□□ -1.04
USP12-201ENST00000282344 HERC2O95714 4834 aa8.44□□□□□ -1.06
USP12-201ENST00000282344 KRTAP19-1Q8IUB9 90 aa8.41□□□□□ -1.06
USP12-201ENST00000282344 KRTAP8-1Q8IUC2 63 aa8.4□□□□□ -1.06
USP12-201ENST00000282344 KMT2CQ8NEZ4 4911 aaKnown RBP8.36□□□□□ -1.07
USP12-201ENST00000282344 KRTAP19-5Q3LI72 72 aa8.26□□□□□ -1.09
USP12-201ENST00000282344 HSPG2P98160 4391 aa8.25□□□□□ -1.09
USP12-201ENST00000282344 KRTAP10-5P60370 271 aa8.25□□□□□ -1.09
USP12-201ENST00000282344 PKD1P98161 4303 aa8.23□□□□□ -1.09
USP12-201ENST00000282344 LPAP08519 4548 aa8.22□□□□□ -1.09
USP12-201ENST00000282344 KRTAP10-7P60409 375 aaPredicted RBP8.15□□□□□ -1.1
USP12-201ENST00000282344 KRTAP19-8Q3LI54 63 aa8.13□□□□□ -1.11
USP12-201ENST00000282344 LCE3CQ5T5A8 94 aa8.11□□□□□ -1.11
USP12-201ENST00000282344 MT1XP80297 61 aa8.04□□□□□ -1.12
USP12-201ENST00000282344 PCLOQ9Y6V0 5065 aa8.02□□□□□ -1.13
USP12-201ENST00000282344 LCE2CQ5TA81 110 aa8□□□□□ -1.13
USP12-201ENST00000282344 MT1BP07438 61 aa8□□□□□ -1.13
USP12-201ENST00000282344 KRTAP9-8Q9BYQ0 159 aa7.98□□□□□ -1.13
USP12-201ENST00000282344 SPRR5A0A1B0GTR4 108 aa7.97□□□□□ -1.13
USP12-201ENST00000282344 HERC1Q15751 4861 aa7.9□□□□□ -1.14
USP12-201ENST00000282344 KRTAP19-2Q3LHN2 52 aa7.88□□□□□ -1.15
USP12-201ENST00000282344 TNXBP22105 4242 aa7.86□□□□□ -1.15
USP12-201ENST00000282344 MUC17Q685J3 4493 aa7.85□□□□□ -1.15
USP12-201ENST00000282344 PKHD1L1Q86WI1 4243 aa7.81□□□□□ -1.16
USP12-201ENST00000282344 BIRC6Q9NR09 4857 aa7.81□□□□□ -1.16
USP12-201ENST00000282344 EPPK1P58107 5090 aaKnown RBP7.78□□□□□ -1.16
USP12-201ENST00000282344 KRTAP4-8A0A0G2JLE6 195 aa7.76□□□□□ -1.17
USP12-201ENST00000282344 KRTAP4-8Q9BYQ9 185 aa7.76□□□□□ -1.17
USP12-201ENST00000282344 ABCA13Q86UQ4 5058 aa7.76□□□□□ -1.17
USP12-201ENST00000282344 SPRR2FQ96RM1 72 aa7.73□□□□□ -1.17
USP12-201ENST00000282344 KRTAP9-3Q9BYQ3 159 aa7.71□□□□□ -1.18
USP12-201ENST00000282344 FLGP20930 4061 aaPredicted RBP7.66□□□□□ -1.18
USP12-201ENST00000282344 UBR4Q5T4S7 5183 aa7.6□□□□□ -1.19
USP12-201ENST00000282344 KRTAP19-4Q3LI73 84 aa7.6□□□□□ -1.19
USP12-201ENST00000282344 SYNE1Q8NF91 8797 aaKnown RBP7.49□□□□□ -1.21
USP12-201ENST00000282344 MUC2Q02817 5179 aa7.47□□□□□ -1.21
USP12-201ENST00000282344 MT1GP13640 62 aa7.45□□□□□ -1.22
USP12-201ENST00000282344 KRTAP4-7Q9BYR0 210 aa7.43□□□□□ -1.22
USP12-201ENST00000282344 LCE2BO14633 110 aa7.42□□□□□ -1.22
USP12-201ENST00000282344 FSIP2Q5CZC0 6907 aa7.41□□□□□ -1.22
USP12-201ENST00000282344 FAT4Q6V0I7 4981 aa7.38□□□□□ -1.23
USP12-201ENST00000282344 RNF213Q63HN8 5207 aa7.37□□□□□ -1.23
USP12-201ENST00000282344 HMCN2Q8NDA2 5059 aa7.37□□□□□ -1.23
USP12-201ENST00000282344 KRTAP12-4P60329 112 aa7.36□□□□□ -1.23
USP12-201ENST00000282344 LCE3BQ5TA77 95 aa7.36□□□□□ -1.23
USP12-201ENST00000282344 MT1LQ93083 61 aa7.2□□□□□ -1.26
USP12-201ENST00000282344 MT1EP04732 61 aa7.13□□□□□ -1.27
USP12-201ENST00000282344 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
USP12-201ENST00000282344 SPRR2EP22531 72 aa7.03□□□□□ -1.28
USP12-201ENST00000282344 SPRR2BP35325 72 aa7.03□□□□□ -1.28
USP12-201ENST00000282344 SPRR2AP35326 72 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms