RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 VPS13BQ7Z7G8 4022 aa7.37□□□□□ -1.23
TMEM47-201ENST00000275954 KRTAP25-1Q3LHN0 102 aa7.36□□□□□ -1.23
TMEM47-201ENST00000275954 PKHD1P08F94 4074 aa7.35□□□□□ -1.23
TMEM47-201ENST00000275954 SACSQ9NZJ4 4579 aa7.35□□□□□ -1.23
TMEM47-201ENST00000275954 P0C880 135 aa7.35□□□□□ -1.23
TMEM47-201ENST00000275954 DNAH6Q9C0G6 4158 aa7.34□□□□□ -1.23
TMEM47-201ENST00000275954 KRTAP3-1Q9BYR8 98 aa7.33□□□□□ -1.24
TMEM47-201ENST00000275954 LRP1Q07954 4544 aaKnown RBP7.33□□□□□ -1.24
TMEM47-201ENST00000275954 MT1HL1P0DM35 61 aa7.3□□□□□ -1.24
TMEM47-201ENST00000275954 DNAH3Q8TD57 4116 aa7.29□□□□□ -1.24
TMEM47-201ENST00000275954 APOBP04114 4563 aaKnown RBP7.29□□□□□ -1.24
TMEM47-201ENST00000275954 DNAH2Q9P225 4427 aa7.28□□□□□ -1.24
TMEM47-201ENST00000275954 KRTAP10-4P60372 401 aaPredicted RBP7.27□□□□□ -1.25
TMEM47-201ENST00000275954 C10orf95Q9H7T3 257 aa7.27□□□□□ -1.25
TMEM47-201ENST00000275954 TPRXLQ17RH7 258 aa7.26□□□□□ -1.25
TMEM47-201ENST00000275954 FRAS1Q86XX4 4008 aa7.23□□□□□ -1.25
TMEM47-201ENST00000275954 RYR2Q92736 4967 aa7.23□□□□□ -1.25
TMEM47-201ENST00000275954 DNAH17Q9UFH2 4485 aa7.2□□□□□ -1.26
TMEM47-201ENST00000275954 HERC2O95714 4834 aa7.2□□□□□ -1.26
TMEM47-201ENST00000275954 DYNC2H1Q8NCM8 4307 aaKnown RBP7.2□□□□□ -1.26
TMEM47-201ENST00000275954 KRTAP17-1Q9BYP8 105 aa7.2□□□□□ -1.26
TMEM47-201ENST00000275954 EPPK1P58107 5090 aaKnown RBP7.19□□□□□ -1.26
TMEM47-201ENST00000275954 LUZP6Q538Z0 58 aa7.19□□□□□ -1.26
TMEM47-201ENST00000275954 ALMS1Q8TCU4 4167 aa7.17□□□□□ -1.26
TMEM47-201ENST00000275954 PLAC4Q8WY50 150 aa7.07□□□□□ -1.28
TMEM47-201ENST00000275954 PCLOQ9Y6V0 5065 aa7.07□□□□□ -1.28
TMEM47-201ENST00000275954 FAT2Q9NYQ8 4349 aa7.06□□□□□ -1.28
TMEM47-201ENST00000275954 NDUFAF8A1L188 74 aa7.06□□□□□ -1.28
TMEM47-201ENST00000275954 LRP2P98164 4655 aa7.03□□□□□ -1.28
TMEM47-201ENST00000275954 KRTAP13-4Q3LI77 160 aa7.02□□□□□ -1.29
TMEM47-201ENST00000275954 KRTAP12-2P59991 146 aa7□□□□□ -1.29
TMEM47-201ENST00000275954 KRTAP10-6P60371 365 aaPredicted RBP7□□□□□ -1.29
TMEM47-201ENST00000275954 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
TMEM47-201ENST00000275954 HECTD4Q9Y4D8 3996 aa6.97□□□□□ -1.29
TMEM47-201ENST00000275954 KRTAP3-3Q9BYR6 98 aa6.91□□□□□ -1.3
TMEM47-201ENST00000275954 KRTAP12-1P59990 96 aa6.89□□□□□ -1.31
TMEM47-201ENST00000275954 TNP1P09430 55 aa6.88□□□□□ -1.31
TMEM47-201ENST00000275954 BIRC6Q9NR09 4857 aa6.88□□□□□ -1.31
TMEM47-201ENST00000275954 ABCA13Q86UQ4 5058 aa6.87□□□□□ -1.31
TMEM47-201ENST00000275954 HSPG2P98160 4391 aa6.85□□□□□ -1.31
TMEM47-201ENST00000275954 KRTAP3-2Q9BYR7 98 aa6.84□□□□□ -1.31
TMEM47-201ENST00000275954 HERC1Q15751 4861 aa6.82□□□□□ -1.32
TMEM47-201ENST00000275954 RNF213Q63HN8 5207 aa6.78□□□□□ -1.32
TMEM47-201ENST00000275954 FSIP2Q5CZC0 6907 aa6.77□□□□□ -1.33
TMEM47-201ENST00000275954 PKD1P98161 4303 aa6.77□□□□□ -1.33
TMEM47-201ENST00000275954 LPAP08519 4548 aa6.74□□□□□ -1.33
TMEM47-201ENST00000275954 A0A0A0MQY5 61 aa6.69□□□□□ -1.34
TMEM47-201ENST00000275954 KRTAP4-1Q9BYQ7 146 aa6.69□□□□□ -1.34
TMEM47-201ENST00000275954 UBR4Q5T4S7 5183 aa6.65□□□□□ -1.35
TMEM47-201ENST00000275954 MUC2Q02817 5179 aa6.65□□□□□ -1.35
TMEM47-201ENST00000275954 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
TMEM47-201ENST00000275954 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
TMEM47-201ENST00000275954 FAT4Q6V0I7 4981 aa6.43□□□□□ -1.38
TMEM47-201ENST00000275954 PKHD1L1Q86WI1 4243 aa6.3□□□□□ -1.4
TMEM47-201ENST00000275954 PRO2289Q9P1D8 64 aa6.3□□□□□ -1.4
TMEM47-201ENST00000275954 MT1HP80294 61 aa6.25□□□□□ -1.41
TMEM47-201ENST00000275954 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
TMEM47-201ENST00000275954 TNXBP22105 4242 aa6.19□□□□□ -1.42
TMEM47-201ENST00000275954 HMCN2Q8NDA2 5059 aa6.12□□□□□ -1.43
TMEM47-201ENST00000275954 MT2AP02795 61 aa6.07□□□□□ -1.44
TMEM47-201ENST00000275954 MT1FP04733 61 aa6.06□□□□□ -1.44
TMEM47-201ENST00000275954 LCE3AQ5TA76 89 aa6□□□□□ -1.45
TMEM47-201ENST00000275954 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
TMEM47-201ENST00000275954 LCE2CQ5TA81 110 aa5.9□□□□□ -1.46
TMEM47-201ENST00000275954 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
TMEM47-201ENST00000275954 USH2AO75445 5202 aa5.86□□□□□ -1.47
TMEM47-201ENST00000275954 SPRR2GQ9BYE4 73 aa5.85□□□□□ -1.47
TMEM47-201ENST00000275954 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
TMEM47-201ENST00000275954 OBSCNQ5VST9 7968 aa5.78□□□□□ -1.48
TMEM47-201ENST00000275954 MUC17Q685J3 4493 aa5.77□□□□□ -1.49
TMEM47-201ENST00000275954 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
TMEM47-201ENST00000275954 KRTAP19-2Q3LHN2 52 aa5.76□□□□□ -1.49
TMEM47-201ENST00000275954 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
TMEM47-201ENST00000275954 KRTAP9-8Q9BYQ0 159 aa5.74□□□□□ -1.49
TMEM47-201ENST00000275954 FLGP20930 4061 aaPredicted RBP5.68□□□□□ -1.5
TMEM47-201ENST00000275954 KRTAP8-1Q8IUC2 63 aa5.59□□□□□ -1.51
TMEM47-201ENST00000275954 LCE2BO14633 110 aa5.55□□□□□ -1.52
TMEM47-201ENST00000275954 DSTQ03001 7570 aaKnown RBP5.53□□□□□ -1.52
TMEM47-201ENST00000275954 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
TMEM47-201ENST00000275954 KRTAP10-7P60409 375 aaPredicted RBP5.52□□□□□ -1.53
TMEM47-201ENST00000275954 MT1BP07438 61 aa5.5□□□□□ -1.53
TMEM47-201ENST00000275954 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
TMEM47-201ENST00000275954 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
TMEM47-201ENST00000275954 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
TMEM47-201ENST00000275954 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
TMEM47-201ENST00000275954 MT1XP80297 61 aa5.47□□□□□ -1.53
TMEM47-201ENST00000275954 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
TMEM47-201ENST00000275954 KRTAP19-5Q3LI72 72 aa5.46□□□□□ -1.53
TMEM47-201ENST00000275954 LCE2AQ5TA79 106 aaPredicted RBP5.45□□□□□ -1.54
TMEM47-201ENST00000275954 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
TMEM47-201ENST00000275954 KRTAP10-5P60370 271 aa5.43□□□□□ -1.54
TMEM47-201ENST00000275954 KMT2DO14686 5537 aa5.42□□□□□ -1.54
TMEM47-201ENST00000275954 INE1O15225 51 aa5.33□□□□□ -1.56
TMEM47-201ENST00000275954 SYNE2Q8WXH0 6885 aaKnown RBP5.32□□□□□ -1.56
TMEM47-201ENST00000275954 FCGBPQ9Y6R7 5405 aaPredicted RBP5.29□□□□□ -1.56
TMEM47-201ENST00000275954 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
TMEM47-201ENST00000275954 SSPOA2VEC9 5147 aa5.24□□□□□ -1.57
TMEM47-201ENST00000275954 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
TMEM47-201ENST00000275954 MACF1Q9UPN3 7388 aaKnown RBP5.13□□□□□ -1.59
TMEM47-201ENST00000275954 MUC12Q9UKN1 5478 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms