RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 KRTAP10-5P60370 271 aa7.42□□□□□ -1.22
ITGA6-201ENST00000264107 ZNF469Q96JG9 3925 aaPredicted RBP7.36□□□□□ -1.23
ITGA6-201ENST00000264107 ALMS1Q8TCU4 4167 aa7.36□□□□□ -1.23
ITGA6-201ENST00000264107 CSMD3Q7Z407 3707 aa7.35□□□□□ -1.23
ITGA6-201ENST00000264107 DNAH9Q9NYC9 4486 aa7.33□□□□□ -1.24
ITGA6-201ENST00000264107 DNAH5Q8TE73 4624 aa7.25□□□□□ -1.25
ITGA6-201ENST00000264107 AKAP9Q99996 3911 aa7.22□□□□□ -1.25
ITGA6-201ENST00000264107 DNAH1Q9P2D7 4330 aa7.16□□□□□ -1.26
ITGA6-201ENST00000264107 PLECQ15149 4684 aaKnown RBP7.14□□□□□ -1.27
ITGA6-201ENST00000264107 DNAH11Q96DT5 4516 aa7.08□□□□□ -1.28
ITGA6-201ENST00000264107 DNAH10Q8IVF4 4471 aa7.04□□□□□ -1.28
ITGA6-201ENST00000264107 DNHD1Q96M86 4753 aa7.04□□□□□ -1.28
ITGA6-201ENST00000264107 VPS13DQ5THJ4 4388 aa6.98□□□□□ -1.29
ITGA6-201ENST00000264107 DNAH17Q9UFH2 4485 aa6.95□□□□□ -1.3
ITGA6-201ENST00000264107 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.3
ITGA6-201ENST00000264107 DYNC1H1Q14204 4646 aaKnown RBP6.89□□□□□ -1.31
ITGA6-201ENST00000264107 LCE3CQ5T5A8 94 aa6.87□□□□□ -1.31
ITGA6-201ENST00000264107 FAT1Q14517 4588 aa6.85□□□□□ -1.31
ITGA6-201ENST00000264107 LRP1BQ9NZR2 4599 aa6.85□□□□□ -1.31
ITGA6-201ENST00000264107 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
ITGA6-201ENST00000264107 STARD9Q9P2P6 4700 aa6.84□□□□□ -1.31
ITGA6-201ENST00000264107 DNAH8Q96JB1 4490 aa6.82□□□□□ -1.32
ITGA6-201ENST00000264107 SPRR5A0A1B0GTR4 108 aa6.81□□□□□ -1.32
ITGA6-201ENST00000264107 DNAH2Q9P225 4427 aa6.8□□□□□ -1.32
ITGA6-201ENST00000264107 SPRR2GQ9BYE4 73 aa6.77□□□□□ -1.33
ITGA6-201ENST00000264107 KRTAP19-5Q3LI72 72 aa6.75□□□□□ -1.33
ITGA6-201ENST00000264107 RYR1P21817 5038 aa6.74□□□□□ -1.33
ITGA6-201ENST00000264107 SACSQ9NZJ4 4579 aa6.71□□□□□ -1.33
ITGA6-201ENST00000264107 MT1HP80294 61 aa6.71□□□□□ -1.34
ITGA6-201ENST00000264107 DNAH3Q8TD57 4116 aa6.69□□□□□ -1.34
ITGA6-201ENST00000264107 DYNC2H1Q8NCM8 4307 aaKnown RBP6.68□□□□□ -1.34
ITGA6-201ENST00000264107 FAT2Q9NYQ8 4349 aa6.68□□□□□ -1.34
ITGA6-201ENST00000264107 PRKDCP78527 4128 aaKnown RBP6.66□□□□□ -1.34
ITGA6-201ENST00000264107 MT2AP02795 61 aa6.63□□□□□ -1.35
ITGA6-201ENST00000264107 KRTAP12-4P60329 112 aa6.58□□□□□ -1.36
ITGA6-201ENST00000264107 ANK2Q01484 3957 aa6.58□□□□□ -1.36
ITGA6-201ENST00000264107 KMT2AQ03164 3969 aa6.57□□□□□ -1.36
ITGA6-201ENST00000264107 APOBP04114 4563 aaKnown RBP6.55□□□□□ -1.36
ITGA6-201ENST00000264107 MT1FP04733 61 aa6.5□□□□□ -1.37
ITGA6-201ENST00000264107 VPS13BQ7Z7G8 4022 aa6.49□□□□□ -1.37
ITGA6-201ENST00000264107 LYSTQ99698 3801 aa6.47□□□□□ -1.37
ITGA6-201ENST00000264107 KRTAP19-4Q3LI73 84 aa6.45□□□□□ -1.38
ITGA6-201ENST00000264107 MYCBP2O75592 4640 aa6.43□□□□□ -1.38
ITGA6-201ENST00000264107 KIAA1109Q2LD37 5005 aa6.43□□□□□ -1.38
ITGA6-201ENST00000264107 KRTAP17-1Q9BYP8 105 aa6.41□□□□□ -1.38
ITGA6-201ENST00000264107 RYR3Q15413 4870 aa6.39□□□□□ -1.39
ITGA6-201ENST00000264107 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
ITGA6-201ENST00000264107 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
ITGA6-201ENST00000264107 LRP1Q07954 4544 aaKnown RBP6.27□□□□□ -1.41
ITGA6-201ENST00000264107 FRAS1Q86XX4 4008 aa6.27□□□□□ -1.41
ITGA6-201ENST00000264107 CMYA5Q8N3K9 4069 aa6.26□□□□□ -1.41
ITGA6-201ENST00000264107 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
ITGA6-201ENST00000264107 DNAH6Q9C0G6 4158 aa6.24□□□□□ -1.41
ITGA6-201ENST00000264107 RYR2Q92736 4967 aa6.23□□□□□ -1.41
ITGA6-201ENST00000264107 FAT3Q8TDW7 4589 aa6.21□□□□□ -1.41
ITGA6-201ENST00000264107 HECTD4Q9Y4D8 3996 aa6.18□□□□□ -1.42
ITGA6-201ENST00000264107 DNAH7Q8WXX0 4024 aa6.18□□□□□ -1.42
ITGA6-201ENST00000264107 MT1XP80297 61 aa6.16□□□□□ -1.42
ITGA6-201ENST00000264107 KRTAP19-8Q3LI54 63 aa6.16□□□□□ -1.42
ITGA6-201ENST00000264107 SPRR2FQ96RM1 72 aa6.13□□□□□ -1.43
ITGA6-201ENST00000264107 MT1GP13640 62 aa6.11□□□□□ -1.43
ITGA6-201ENST00000264107 LCE3DQ9BYE3 92 aa6.08□□□□□ -1.44
ITGA6-201ENST00000264107 HERC2O95714 4834 aa6.05□□□□□ -1.44
ITGA6-201ENST00000264107 LCE3EQ5T5B0 92 aa6.04□□□□□ -1.44
ITGA6-201ENST00000264107 HYDINQ4G0P3 5121 aa6.02□□□□□ -1.45
ITGA6-201ENST00000264107 LRP2P98164 4655 aa5.99□□□□□ -1.45
ITGA6-201ENST00000264107 KRTAP9-8Q9BYQ0 159 aa5.99□□□□□ -1.45
ITGA6-201ENST00000264107 MT1BP07438 61 aa5.97□□□□□ -1.45
ITGA6-201ENST00000264107 HSPG2P98160 4391 aa5.96□□□□□ -1.45
ITGA6-201ENST00000264107 LCE2CQ5TA81 110 aa5.94□□□□□ -1.46
ITGA6-201ENST00000264107 PKHD1P08F94 4074 aa5.9□□□□□ -1.47
ITGA6-201ENST00000264107 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
ITGA6-201ENST00000264107 KRTAP4-8Q9BYQ9 185 aa5.88□□□□□ -1.47
ITGA6-201ENST00000264107 PKD1P98161 4303 aa5.88□□□□□ -1.47
ITGA6-201ENST00000264107 BIRC6Q9NR09 4857 aa5.88□□□□□ -1.47
ITGA6-201ENST00000264107 PRM1P04553 51 aa5.85□□□□□ -1.47
ITGA6-201ENST00000264107 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
ITGA6-201ENST00000264107 PCLOQ9Y6V0 5065 aa5.82□□□□□ -1.48
ITGA6-201ENST00000264107 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
ITGA6-201ENST00000264107 HERC1Q15751 4861 aa5.79□□□□□ -1.48
ITGA6-201ENST00000264107 LPAP08519 4548 aa5.76□□□□□ -1.49
ITGA6-201ENST00000264107 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
ITGA6-201ENST00000264107 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
ITGA6-201ENST00000264107 SPRR2EP22531 72 aa5.7□□□□□ -1.5
ITGA6-201ENST00000264107 SPRR2BP35325 72 aa5.7□□□□□ -1.5
ITGA6-201ENST00000264107 SPRR2AP35326 72 aa5.7□□□□□ -1.5
ITGA6-201ENST00000264107 PKHD1L1Q86WI1 4243 aa5.66□□□□□ -1.5
ITGA6-201ENST00000264107 MT1LQ93083 61 aa5.66□□□□□ -1.5
ITGA6-201ENST00000264107 TNXBP22105 4242 aa5.61□□□□□ -1.51
ITGA6-201ENST00000264107 LCE2BO14633 110 aa5.56□□□□□ -1.52
ITGA6-201ENST00000264107 MUC17Q685J3 4493 aa5.56□□□□□ -1.52
ITGA6-201ENST00000264107 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
ITGA6-201ENST00000264107 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
ITGA6-201ENST00000264107 KRTAP2-1Q9BYU5 128 aa5.51□□□□□ -1.53
ITGA6-201ENST00000264107 MT1EP04732 61 aa5.5□□□□□ -1.53
ITGA6-201ENST00000264107 SPRR2DP22532 72 aa5.5□□□□□ -1.53
ITGA6-201ENST00000264107 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
ITGA6-201ENST00000264107 ABCA13Q86UQ4 5058 aa5.48□□□□□ -1.53
ITGA6-201ENST00000264107 KRTAP19-3Q7Z4W3 81 aa5.48□□□□□ -1.53
ITGA6-201ENST00000264107 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms