RNA–Protein interactions for RNA: ENST00000253458.11

GSE1-201, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GSE1, Length 7,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-201ENST00000253458 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
GSE1-201ENST00000253458 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
GSE1-201ENST00000253458 KRTAP3-3Q9BYR6 98 aa5.58□□□□□ -1.52
GSE1-201ENST00000253458 KRTAP3-2Q9BYR7 98 aa5.51□□□□□ -1.53
GSE1-201ENST00000253458 ALMS1Q8TCU4 4167 aa5.49□□□□□ -1.53
GSE1-201ENST00000253458 KRTAP10-4P60372 401 aaPredicted RBP5.42□□□□□ -1.54
GSE1-201ENST00000253458 DNAH9Q9NYC9 4486 aa5.36□□□□□ -1.55
GSE1-201ENST00000253458 SPRR2FQ96RM1 72 aa5.34□□□□□ -1.55
GSE1-201ENST00000253458 DNAH1Q9P2D7 4330 aa5.32□□□□□ -1.56
GSE1-201ENST00000253458 DNAH10Q8IVF4 4471 aa5.32□□□□□ -1.56
GSE1-201ENST00000253458 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
GSE1-201ENST00000253458 FRAS1Q86XX4 4008 aa5.29□□□□□ -1.56
GSE1-201ENST00000253458 DNAH2Q9P225 4427 aa5.27□□□□□ -1.57
GSE1-201ENST00000253458 KMT2AQ03164 3969 aa5.26□□□□□ -1.57
GSE1-201ENST00000253458 MT1HP80294 61 aa5.26□□□□□ -1.57
GSE1-201ENST00000253458 VPS13BQ7Z7G8 4022 aa5.25□□□□□ -1.57
GSE1-201ENST00000253458 ANK2Q01484 3957 aa5.24□□□□□ -1.57
GSE1-201ENST00000253458 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
GSE1-201ENST00000253458 LYSTQ99698 3801 aa5.19□□□□□ -1.58
GSE1-201ENST00000253458 DNAH5Q8TE73 4624 aa5.15□□□□□ -1.58
GSE1-201ENST00000253458 PLECQ15149 4684 aaKnown RBP5.11□□□□□ -1.59
GSE1-201ENST00000253458 DNAH11Q96DT5 4516 aa5.09□□□□□ -1.59
GSE1-201ENST00000253458 MT2AP02795 61 aa5.09□□□□□ -1.59
GSE1-201ENST00000253458 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
GSE1-201ENST00000253458 SPRR2EP22531 72 aa5.06□□□□□ -1.6
GSE1-201ENST00000253458 SPRR2BP35325 72 aa5.06□□□□□ -1.6
GSE1-201ENST00000253458 SPRR2AP35326 72 aa5.06□□□□□ -1.6
GSE1-201ENST00000253458 FAT2Q9NYQ8 4349 aa5.05□□□□□ -1.6
GSE1-201ENST00000253458 MT1FP04733 61 aa5.05□□□□□ -1.6
GSE1-201ENST00000253458 DNAH3Q8TD57 4116 aa5.01□□□□□ -1.61
GSE1-201ENST00000253458 LCE3BQ5TA77 95 aa5□□□□□ -1.61
GSE1-201ENST00000253458 DNAH8Q96JB1 4490 aa5□□□□□ -1.61
GSE1-201ENST00000253458 CMYA5Q8N3K9 4069 aa5□□□□□ -1.61
GSE1-201ENST00000253458 STARD9Q9P2P6 4700 aa4.99□□□□□ -1.61
GSE1-201ENST00000253458 PRKDCP78527 4128 aaKnown RBP4.99□□□□□ -1.61
GSE1-201ENST00000253458 FAT1Q14517 4588 aa4.97□□□□□ -1.61
GSE1-201ENST00000253458 LRP1BQ9NZR2 4599 aa4.97□□□□□ -1.61
GSE1-201ENST00000253458 DNAH17Q9UFH2 4485 aa4.97□□□□□ -1.61
GSE1-201ENST00000253458 DNAH6Q9C0G6 4158 aa4.92□□□□□ -1.62
GSE1-201ENST00000253458 DNHD1Q96M86 4753 aa4.87□□□□□ -1.63
GSE1-201ENST00000253458 SACSQ9NZJ4 4579 aa4.86□□□□□ -1.63
GSE1-201ENST00000253458 SPRR2DP22532 72 aa4.85□□□□□ -1.63
GSE1-201ENST00000253458 VPS13DQ5THJ4 4388 aa4.84□□□□□ -1.63
GSE1-201ENST00000253458 DNAH7Q8WXX0 4024 aa4.83□□□□□ -1.64
GSE1-201ENST00000253458 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
GSE1-201ENST00000253458 FAT3Q8TDW7 4589 aa4.81□□□□□ -1.64
GSE1-201ENST00000253458 MT1GP13640 62 aa4.8□□□□□ -1.64
GSE1-201ENST00000253458 SPRR2GQ9BYE4 73 aa4.8□□□□□ -1.64
GSE1-201ENST00000253458 DYNC2H1Q8NCM8 4307 aaKnown RBP4.8□□□□□ -1.64
GSE1-201ENST00000253458 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
GSE1-201ENST00000253458 RYR1P21817 5038 aa4.75□□□□□ -1.65
GSE1-201ENST00000253458 DYNC1H1Q14204 4646 aaKnown RBP4.75□□□□□ -1.65
GSE1-201ENST00000253458 APOBP04114 4563 aaKnown RBP4.74□□□□□ -1.65
GSE1-201ENST00000253458 KRTAP17-1Q9BYP8 105 aa4.73□□□□□ -1.65
GSE1-201ENST00000253458 LCE2BO14633 110 aa4.72□□□□□ -1.65
GSE1-201ENST00000253458 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
GSE1-201ENST00000253458 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
GSE1-201ENST00000253458 LPAP08519 4548 aa4.72□□□□□ -1.65
GSE1-201ENST00000253458 MYCBP2O75592 4640 aa4.69□□□□□ -1.66
GSE1-201ENST00000253458 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
GSE1-201ENST00000253458 HECTD4Q9Y4D8 3996 aa4.59□□□□□ -1.67
GSE1-201ENST00000253458 LCE3EQ5T5B0 92 aa4.59□□□□□ -1.67
GSE1-201ENST00000253458 LRP1Q07954 4544 aaKnown RBP4.59□□□□□ -1.67
GSE1-201ENST00000253458 KRTAP19-1Q8IUB9 90 aa4.58□□□□□ -1.68
GSE1-201ENST00000253458 MT4P47944 62 aa4.56□□□□□ -1.68
GSE1-201ENST00000253458 PKHD1P08F94 4074 aa4.52□□□□□ -1.69
GSE1-201ENST00000253458 MT1XP80297 61 aa4.49□□□□□ -1.69
GSE1-201ENST00000253458 LCE2CQ5TA81 110 aa4.49□□□□□ -1.69
GSE1-201ENST00000253458 HSPG2P98160 4391 aa4.48□□□□□ -1.69
GSE1-201ENST00000253458 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
GSE1-201ENST00000253458 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
GSE1-201ENST00000253458 PKD1P98161 4303 aa4.44□□□□□ -1.7
GSE1-201ENST00000253458 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
GSE1-201ENST00000253458 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
GSE1-201ENST00000253458 RYR3Q15413 4870 aa4.4□□□□□ -1.71
GSE1-201ENST00000253458 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
GSE1-201ENST00000253458 MT1BP07438 61 aa4.39□□□□□ -1.71
GSE1-201ENST00000253458 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
GSE1-201ENST00000253458 KRTAP19-8Q3LI54 63 aa4.32□□□□□ -1.72
GSE1-201ENST00000253458 PKHD1L1Q86WI1 4243 aa4.31□□□□□ -1.72
GSE1-201ENST00000253458 LOC100996750A0A140TA64 210 aa4.29□□□□□ -1.72
GSE1-201ENST00000253458 LRP2P98164 4655 aa4.28□□□□□ -1.72
GSE1-201ENST00000253458 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
GSE1-201ENST00000253458 KRTAP9-2Q9BYQ4 174 aa4.28□□□□□ -1.72
GSE1-201ENST00000253458 PRM1P04553 51 aa4.28□□□□□ -1.72
GSE1-201ENST00000253458 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
GSE1-201ENST00000253458 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
GSE1-201ENST00000253458 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
GSE1-201ENST00000253458 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
GSE1-201ENST00000253458 TNXBP22105 4242 aa4.2□□□□□ -1.74
GSE1-201ENST00000253458 FLGP20930 4061 aaPredicted RBP4.19□□□□□ -1.74
GSE1-201ENST00000253458 HYDINQ4G0P3 5121 aa4.19□□□□□ -1.74
GSE1-201ENST00000253458 KRTAP19-3Q7Z4W3 81 aa4.18□□□□□ -1.74
GSE1-201ENST00000253458 FSIP2Q5CZC0 6907 aa4.16□□□□□ -1.74
GSE1-201ENST00000253458 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.74
GSE1-201ENST00000253458 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
GSE1-201ENST00000253458 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
GSE1-201ENST00000253458 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
GSE1-201ENST00000253458 LCE1AQ5T7P2 110 aa4.1□□□□□ -1.75
GSE1-201ENST00000253458 MT1LQ93083 61 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms