RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 M0QZ58 72 aa6.72□□□□□ -1.33
COLGALT1-201ENST00000252599 FAT1Q14517 4588 aa6.72□□□□□ -1.33
COLGALT1-201ENST00000252599 DNAH2Q9P225 4427 aa6.71□□□□□ -1.34
COLGALT1-201ENST00000252599 KRTAP12-1P59990 96 aa6.67□□□□□ -1.34
COLGALT1-201ENST00000252599 HECTD4Q9Y4D8 3996 aa6.67□□□□□ -1.34
COLGALT1-201ENST00000252599 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
COLGALT1-201ENST00000252599 DNAH5Q8TE73 4624 aa6.66□□□□□ -1.34
COLGALT1-201ENST00000252599 KRTAP10-6P60371 365 aaPredicted RBP6.62□□□□□ -1.35
COLGALT1-201ENST00000252599 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
COLGALT1-201ENST00000252599 MYCBP2O75592 4640 aa6.6□□□□□ -1.35
COLGALT1-201ENST00000252599 ALMS1Q8TCU4 4167 aa6.6□□□□□ -1.35
COLGALT1-201ENST00000252599 HYDINQ4G0P3 5121 aa6.59□□□□□ -1.35
COLGALT1-201ENST00000252599 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
COLGALT1-201ENST00000252599 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
COLGALT1-201ENST00000252599 PKHD1P08F94 4074 aa6.52□□□□□ -1.37
COLGALT1-201ENST00000252599 KRTAP23-1A1A580 65 aa6.52□□□□□ -1.37
COLGALT1-201ENST00000252599 INE1O15225 51 aa6.52□□□□□ -1.37
COLGALT1-201ENST00000252599 A0A1B0GVY2 172 aa6.52□□□□□ -1.37
COLGALT1-201ENST00000252599 DYNC2H1Q8NCM8 4307 aaKnown RBP6.5□□□□□ -1.37
COLGALT1-201ENST00000252599 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
COLGALT1-201ENST00000252599 RPS29P62273 56 aaKnown RBP6.48□□□□□ -1.37
COLGALT1-201ENST00000252599 DYNC1H1Q14204 4646 aaKnown RBP6.45□□□□□ -1.38
COLGALT1-201ENST00000252599 FAT3Q8TDW7 4589 aa6.44□□□□□ -1.38
COLGALT1-201ENST00000252599 KIAA1109Q2LD37 5005 aa6.43□□□□□ -1.38
COLGALT1-201ENST00000252599 LRP1Q07954 4544 aaKnown RBP6.4□□□□□ -1.38
COLGALT1-201ENST00000252599 FAT2Q9NYQ8 4349 aa6.38□□□□□ -1.39
COLGALT1-201ENST00000252599 M0R2T5 61 aa6.37□□□□□ -1.39
COLGALT1-201ENST00000252599 RYR1P21817 5038 aa6.36□□□□□ -1.39
COLGALT1-201ENST00000252599 KRTAP4-5Q9BYR2 181 aa6.32□□□□□ -1.4
COLGALT1-201ENST00000252599 KMT2CQ8NEZ4 4911 aaKnown RBP6.3□□□□□ -1.4
COLGALT1-201ENST00000252599 SACSQ9NZJ4 4579 aa6.29□□□□□ -1.4
COLGALT1-201ENST00000252599 APOBP04114 4563 aaKnown RBP6.28□□□□□ -1.4
COLGALT1-201ENST00000252599 KRTAP10-4P60372 401 aaPredicted RBP6.27□□□□□ -1.41
COLGALT1-201ENST00000252599 TNP1P09430 55 aa6.25□□□□□ -1.41
COLGALT1-201ENST00000252599 RYR3Q15413 4870 aa6.24□□□□□ -1.41
COLGALT1-201ENST00000252599 KRTAP3-3Q9BYR6 98 aa6.19□□□□□ -1.42
COLGALT1-201ENST00000252599 PKD1P98161 4303 aa6.18□□□□□ -1.42
COLGALT1-201ENST00000252599 MT1HL1P0DM35 61 aa6.16□□□□□ -1.42
COLGALT1-201ENST00000252599 KRTAP17-1Q9BYP8 105 aa6.12□□□□□ -1.43
COLGALT1-201ENST00000252599 LRP2P98164 4655 aa6.09□□□□□ -1.43
COLGALT1-201ENST00000252599 HSPG2P98160 4391 aa6.05□□□□□ -1.44
COLGALT1-201ENST00000252599 RYR2Q92736 4967 aa6□□□□□ -1.45
COLGALT1-201ENST00000252599 LPAP08519 4548 aa5.94□□□□□ -1.46
COLGALT1-201ENST00000252599 EPPK1P58107 5090 aaKnown RBP5.92□□□□□ -1.46
COLGALT1-201ENST00000252599 PKHD1L1Q86WI1 4243 aa5.88□□□□□ -1.47
COLGALT1-201ENST00000252599 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
COLGALT1-201ENST00000252599 HERC2O95714 4834 aa5.85□□□□□ -1.47
COLGALT1-201ENST00000252599 MUC2Q02817 5179 aa5.79□□□□□ -1.48
COLGALT1-201ENST00000252599 KRTAP4-1Q9BYQ7 146 aa5.78□□□□□ -1.48
COLGALT1-201ENST00000252599 ABCA13Q86UQ4 5058 aa5.78□□□□□ -1.48
COLGALT1-201ENST00000252599 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
COLGALT1-201ENST00000252599 TNXBP22105 4242 aa5.74□□□□□ -1.49
COLGALT1-201ENST00000252599 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
COLGALT1-201ENST00000252599 PCLOQ9Y6V0 5065 aa5.65□□□□□ -1.5
COLGALT1-201ENST00000252599 RNF213Q63HN8 5207 aa5.64□□□□□ -1.51
COLGALT1-201ENST00000252599 HERC1Q15751 4861 aa5.6□□□□□ -1.51
COLGALT1-201ENST00000252599 FAT4Q6V0I7 4981 aa5.55□□□□□ -1.52
COLGALT1-201ENST00000252599 FSIP2Q5CZC0 6907 aa5.45□□□□□ -1.54
COLGALT1-201ENST00000252599 UBR4Q5T4S7 5183 aa5.43□□□□□ -1.54
COLGALT1-201ENST00000252599 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
COLGALT1-201ENST00000252599 BIRC6Q9NR09 4857 aa5.35□□□□□ -1.55
COLGALT1-201ENST00000252599 MT1HP80294 61 aa5.22□□□□□ -1.57
COLGALT1-201ENST00000252599 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
COLGALT1-201ENST00000252599 MUC17Q685J3 4493 aa5.2□□□□□ -1.58
COLGALT1-201ENST00000252599 HMCN2Q8NDA2 5059 aa5.19□□□□□ -1.58
COLGALT1-201ENST00000252599 MT1FP04733 61 aa5.18□□□□□ -1.58
COLGALT1-201ENST00000252599 MT2AP02795 61 aa5.15□□□□□ -1.59
COLGALT1-201ENST00000252599 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
COLGALT1-201ENST00000252599 KRTAP19-2Q3LHN2 52 aa5.14□□□□□ -1.59
COLGALT1-201ENST00000252599 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
COLGALT1-201ENST00000252599 LCE2CQ5TA81 110 aa5.06□□□□□ -1.6
COLGALT1-201ENST00000252599 USH2AO75445 5202 aa5.04□□□□□ -1.6
COLGALT1-201ENST00000252599 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
COLGALT1-201ENST00000252599 SPRR2GQ9BYE4 73 aa5.01□□□□□ -1.61
COLGALT1-201ENST00000252599 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
COLGALT1-201ENST00000252599 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
COLGALT1-201ENST00000252599 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
COLGALT1-201ENST00000252599 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
COLGALT1-201ENST00000252599 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.63
COLGALT1-201ENST00000252599 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
COLGALT1-201ENST00000252599 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
COLGALT1-201ENST00000252599 KMT2DO14686 5537 aa4.88□□□□□ -1.63
COLGALT1-201ENST00000252599 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
COLGALT1-201ENST00000252599 MT1BP07438 61 aa4.8□□□□□ -1.64
COLGALT1-201ENST00000252599 MT1XP80297 61 aa4.8□□□□□ -1.64
COLGALT1-201ENST00000252599 KRTAP4-8A0A0G2JLE6 195 aa4.77□□□□□ -1.65
COLGALT1-201ENST00000252599 KRTAP4-8Q9BYQ9 185 aa4.77□□□□□ -1.65
COLGALT1-201ENST00000252599 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
COLGALT1-201ENST00000252599 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
COLGALT1-201ENST00000252599 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
COLGALT1-201ENST00000252599 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
COLGALT1-201ENST00000252599 KRTAP19-8Q3LI54 63 aa4.69□□□□□ -1.66
COLGALT1-201ENST00000252599 LCE2BO14633 110 aa4.67□□□□□ -1.66
COLGALT1-201ENST00000252599 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
COLGALT1-201ENST00000252599 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
COLGALT1-201ENST00000252599 LCE1AQ5T7P2 110 aa4.56□□□□□ -1.68
COLGALT1-201ENST00000252599 LCE2AQ5TA79 106 aaPredicted RBP4.56□□□□□ -1.68
COLGALT1-201ENST00000252599 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
COLGALT1-201ENST00000252599 MUC19Q7Z5P9 8384 aa4.5□□□□□ -1.69
COLGALT1-201ENST00000252599 PRM1P04553 51 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms