RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 PELP1Q8IZL8 1130 aaKnown RBP23.73■■□□□ 1.39
COLGALT1-201ENST00000252599 MYT1Q01538 1121 aa23.41■■□□□ 1.34
COLGALT1-201ENST00000252599 NISCHQ9Y2I1 1504 aa23.24■■□□□ 1.31
COLGALT1-201ENST00000252599 DCAF8L2P0C7V8 631 aa22.33■■□□□ 1.16
COLGALT1-201ENST00000252599 TTBK1Q5TCY1 1321 aaPredicted RBP22.08■■□□□ 1.13
COLGALT1-201ENST00000252599 PRKCSHP14314 528 aaPredicted RBP21.87■■□□□ 1.09
COLGALT1-201ENST00000252599 ERICH6Q7L0X2 663 aa21.87■■□□□ 1.09
COLGALT1-201ENST00000252599 SHROOM4Q9ULL8 1493 aa21.81■■□□□ 1.08
COLGALT1-201ENST00000252599 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.05
COLGALT1-201ENST00000252599 BCL11AQ9H165 835 aa21.58■■□□□ 1.04
COLGALT1-201ENST00000252599 HRCP23327 699 aa21.55■■□□□ 1.04
COLGALT1-201ENST00000252599 PPARGC1BQ86YN6 1023 aaKnown RBP21.5■■□□□ 1.03
COLGALT1-201ENST00000252599 SLC24A1O60721 1099 aa21.38■■□□□ 1.01
COLGALT1-201ENST00000252599 SCAF1Q9H7N4 1312 aaKnown RBP21.32■■□□□ 1
COLGALT1-201ENST00000252599 CENPBP07199 599 aaPredicted RBP21.29■■□□□ 1
COLGALT1-201ENST00000252599 PCGF6Q9BYE7 350 aa21.14■□□□□ 0.98
COLGALT1-201ENST00000252599 FAM9AQ8IZU1 332 aaPredicted RBP21.1■□□□□ 0.97
COLGALT1-201ENST00000252599 EHMT2Q96KQ7 1210 aa20.85■□□□□ 0.93
COLGALT1-201ENST00000252599 GTF3C3Q9Y5Q9 886 aa20.83■□□□□ 0.93
COLGALT1-201ENST00000252599 APLP2Q06481 763 aa20.71■□□□□ 0.91
COLGALT1-201ENST00000252599 EIF5BO60841 1220 aaKnown RBP20.69■□□□□ 0.9
COLGALT1-201ENST00000252599 ACIN1Q9UKV3 1341 aaKnown RBP20.52■□□□□ 0.87
COLGALT1-201ENST00000252599 NEUROD1Q13562 356 aa20.39■□□□□ 0.85
COLGALT1-201ENST00000252599 ANP32EQ9BTT0 268 aa20.37■□□□□ 0.85
COLGALT1-201ENST00000252599 YTHDC1Q96MU7 727 aaKnown RBP20.34■□□□□ 0.85
COLGALT1-201ENST00000252599 CSRNP3Q8WYN3 585 aa20.25■□□□□ 0.83
COLGALT1-201ENST00000252599 DAXXQ9UER7 740 aaPredicted RBP20.18■□□□□ 0.82
COLGALT1-201ENST00000252599 CHIC1Q5VXU3 224 aa20.17■□□□□ 0.82
COLGALT1-201ENST00000252599 LOC105371045A0A1W2PR82 267 aa20.17■□□□□ 0.82
COLGALT1-201ENST00000252599 ZEB1P37275 1124 aaPredicted RBP20.16■□□□□ 0.82
COLGALT1-201ENST00000252599 ANO8Q9HCE9 1232 aaPredicted RBP20.16■□□□□ 0.82
COLGALT1-201ENST00000252599 PLEKHG5O94827 1062 aa20.13■□□□□ 0.81
COLGALT1-201ENST00000252599 CCDC136Q96JN2 1154 aa20.08■□□□□ 0.8
COLGALT1-201ENST00000252599 PODXL2Q9NZ53 605 aa20.03■□□□□ 0.8
COLGALT1-201ENST00000252599 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.81■□□□□ 0.76
COLGALT1-201ENST00000252599 TRIM41Q8WV44 630 aa19.76■□□□□ 0.75
COLGALT1-201ENST00000252599 PKNOX2Q96KN3 472 aa19.76■□□□□ 0.75
COLGALT1-201ENST00000252599 RANGAP1P46060 587 aaPredicted RBP19.69■□□□□ 0.74
COLGALT1-201ENST00000252599 MYO15BQ96JP2 1530 aa19.66■□□□□ 0.74
COLGALT1-201ENST00000252599 RTN4Q9NQC3 1192 aaKnown RBP19.65■□□□□ 0.74
COLGALT1-201ENST00000252599 SALL2Q9Y467 1007 aaPredicted RBP19.64■□□□□ 0.73
COLGALT1-201ENST00000252599 DIEXFQ68CQ4 756 aaKnown RBP19.63■□□□□ 0.73
COLGALT1-201ENST00000252599 ABCC9O60706 1549 aa19.62■□□□□ 0.73
COLGALT1-201ENST00000252599 UBE2Q2Q8WVN8 375 aa19.58■□□□□ 0.73
COLGALT1-201ENST00000252599 A0A0U1RQG5 324 aaPredicted RBP19.53■□□□□ 0.72
COLGALT1-201ENST00000252599 CCER1Q8TC90 406 aaPredicted RBP19.5■□□□□ 0.71
COLGALT1-201ENST00000252599 TRIM26Q12899 539 aaPredicted RBP19.48■□□□□ 0.71
COLGALT1-201ENST00000252599 GLIPR1L2Q4G1C9 344 aa19.47■□□□□ 0.71
COLGALT1-201ENST00000252599 ZCCHC6Q5VYS8 1495 aaKnown RBP19.47■□□□□ 0.71
COLGALT1-201ENST00000252599 BCANQ96GW7 911 aa19.46■□□□□ 0.71
COLGALT1-201ENST00000252599 NEFLP07196 543 aa19.42■□□□□ 0.7
COLGALT1-201ENST00000252599 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.79e-10■■■■□ 19.5
COLGALT1-201ENST00000252599 DEKP35659 375 aaKnown RBP19.35■□□□□ 0.69
COLGALT1-201ENST00000252599 TSHZ2Q9NRE2 1034 aa19.28■□□□□ 0.68
COLGALT1-201ENST00000252599 RTL5Q5HYW3 569 aaPredicted RBP19.27■□□□□ 0.68
COLGALT1-201ENST00000252599 UBTFP17480 764 aaKnown RBP19.23■□□□□ 0.67
COLGALT1-201ENST00000252599 NBR1Q14596 966 aa19.23■□□□□ 0.67
COLGALT1-201ENST00000252599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.21■□□□□ 0.67
COLGALT1-201ENST00000252599 PDE4CQ08493 712 aa19.21■□□□□ 0.67
COLGALT1-201ENST00000252599 VSIG10Q8N0Z9 540 aa19.18■□□□□ 0.66
COLGALT1-201ENST00000252599 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
COLGALT1-201ENST00000252599 CLSPNQ9HAW4 1339 aa19.15■□□□□ 0.66
COLGALT1-201ENST00000252599 AEBP2Q6ZN18 517 aaPredicted RBP19.13■□□□□ 0.65
COLGALT1-201ENST00000252599 TIMELESSQ9UNS1 1208 aa19.06■□□□□ 0.64
COLGALT1-201ENST00000252599 ERICH6BQ5W0A0 696 aa19.04■□□□□ 0.64
COLGALT1-201ENST00000252599 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
COLGALT1-201ENST00000252599 PDIA4P13667 645 aaKnown RBP19.02■□□□□ 0.63
COLGALT1-201ENST00000252599 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
COLGALT1-201ENST00000252599 KLHL34Q8N239 644 aa18.94■□□□□ 0.62
COLGALT1-201ENST00000252599 ATP1B4Q9UN42 357 aaPredicted RBP18.94■□□□□ 0.62
COLGALT1-201ENST00000252599 RBM19Q9Y4C8 960 aaKnown RBP18.92■□□□□ 0.62
COLGALT1-201ENST00000252599 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.61
COLGALT1-201ENST00000252599 IL27Q8NEV9 243 aa18.88■□□□□ 0.61
COLGALT1-201ENST00000252599 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
COLGALT1-201ENST00000252599 BCL11BQ9C0K0 894 aaPredicted RBP18.86■□□□□ 0.61
COLGALT1-201ENST00000252599 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
COLGALT1-201ENST00000252599 ITGAEP38570 1179 aa18.82■□□□□ 0.6
COLGALT1-201ENST00000252599 ZMYND15Q9H091 742 aa18.82■□□□□ 0.6
COLGALT1-201ENST00000252599 FKBP8Q14318 412 aa18.77■□□□□ 0.6
COLGALT1-201ENST00000252599 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.59
COLGALT1-201ENST00000252599 MIER1Q8N108 512 aa18.73■□□□□ 0.59
COLGALT1-201ENST00000252599 CDK11AQ9UQ88 783 aaPredicted RBP18.7■□□□□ 0.58
COLGALT1-201ENST00000252599 ZNF316A6NFI3 1004 aaPredicted RBP18.64■□□□□ 0.57
COLGALT1-201ENST00000252599 HAP1P54257 671 aaPredicted RBP18.63■□□□□ 0.57
COLGALT1-201ENST00000252599 RBM10P98175 930 aaKnown RBP18.63■□□□□ 0.57
COLGALT1-201ENST00000252599 CECR2Q9BXF3 1484 aa18.61■□□□□ 0.57
COLGALT1-201ENST00000252599 PAXIP1Q6ZW49 1069 aaPredicted RBP18.59■□□□□ 0.57
COLGALT1-201ENST00000252599 AMER1Q5JTC6 1135 aaPredicted RBP18.58■□□□□ 0.56
COLGALT1-201ENST00000252599 FGD1P98174 961 aa18.54■□□□□ 0.56
COLGALT1-201ENST00000252599 DHX37Q8IY37 1157 aaKnown RBP18.5■□□□□ 0.55
COLGALT1-201ENST00000252599 RB1CC1Q8TDY2 1594 aa18.49■□□□□ 0.55
COLGALT1-201ENST00000252599 NAP1L5Q96NT1 182 aaPredicted RBP18.49■□□□□ 0.55
COLGALT1-201ENST00000252599 NCBP3Q53F19 620 aaKnown RBP18.47■□□□□ 0.55
COLGALT1-201ENST00000252599 MSH5O43196 834 aa18.46■□□□□ 0.55
COLGALT1-201ENST00000252599 NEFMP07197 916 aa18.46■□□□□ 0.55
COLGALT1-201ENST00000252599 TAF7LQ5H9L4 462 aa18.45■□□□□ 0.54
COLGALT1-201ENST00000252599 ARID4BQ4LE39 1312 aaPredicted RBP18.45■□□□□ 0.54
COLGALT1-201ENST00000252599 PLPPR3Q6T4P5 718 aa18.44■□□□□ 0.54
COLGALT1-201ENST00000252599 HSP90AA2PQ14568 343 aaPredicted RBP18.43■□□□□ 0.54
COLGALT1-201ENST00000252599 RSPH6AQ9H0K4 717 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms