RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 KRTAP13-4Q3LI77 160 aa8□□□□□ -1.13
HOXC12-201ENST00000243103 DYNC1H1Q14204 4646 aaKnown RBP7.92□□□□□ -1.14
HOXC12-201ENST00000243103 KMT2CQ8NEZ4 4911 aaKnown RBP7.92□□□□□ -1.14
HOXC12-201ENST00000243103 LUZP6Q538Z0 58 aa7.86□□□□□ -1.15
HOXC12-201ENST00000243103 KRTAP15-1Q3LI76 137 aa7.82□□□□□ -1.16
HOXC12-201ENST00000243103 S4R3F8 94 aa7.82□□□□□ -1.16
HOXC12-201ENST00000243103 KRTAP12-2P59991 146 aa7.81□□□□□ -1.16
HOXC12-201ENST00000243103 PKD1P98161 4303 aa7.8□□□□□ -1.16
HOXC12-201ENST00000243103 APOBP04114 4563 aaKnown RBP7.79□□□□□ -1.16
HOXC12-201ENST00000243103 SACSQ9NZJ4 4579 aa7.77□□□□□ -1.17
HOXC12-201ENST00000243103 KIAA1109Q2LD37 5005 aa7.74□□□□□ -1.17
HOXC12-201ENST00000243103 KRTAP10-6P60371 365 aaPredicted RBP7.73□□□□□ -1.17
HOXC12-201ENST00000243103 LPAP08519 4548 aa7.67□□□□□ -1.18
HOXC12-201ENST00000243103 HSPG2P98160 4391 aa7.66□□□□□ -1.18
HOXC12-201ENST00000243103 KRTAP10-8P60410 259 aa7.63□□□□□ -1.19
HOXC12-201ENST00000243103 RYR1P21817 5038 aa7.63□□□□□ -1.19
HOXC12-201ENST00000243103 LRP2P98164 4655 aa7.59□□□□□ -1.19
HOXC12-201ENST00000243103 Q5VSD8 79 aa7.58□□□□□ -1.2
HOXC12-201ENST00000243103 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
HOXC12-201ENST00000243103 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
HOXC12-201ENST00000243103 RYR3Q15413 4870 aa7.55□□□□□ -1.2
HOXC12-201ENST00000243103 KRTAP12-1P59990 96 aa7.54□□□□□ -1.2
HOXC12-201ENST00000243103 EPPK1P58107 5090 aaKnown RBP7.53□□□□□ -1.2
HOXC12-201ENST00000243103 PLAC4Q8WY50 150 aa7.51□□□□□ -1.21
HOXC12-201ENST00000243103 M0QZ58 72 aa7.5□□□□□ -1.21
HOXC12-201ENST00000243103 MUC2Q02817 5179 aa7.5□□□□□ -1.21
HOXC12-201ENST00000243103 KRTAP17-1Q9BYP8 105 aa7.44□□□□□ -1.22
HOXC12-201ENST00000243103 PKHD1L1Q86WI1 4243 aa7.44□□□□□ -1.22
HOXC12-201ENST00000243103 R4GN34 69 aa7.41□□□□□ -1.22
HOXC12-201ENST00000243103 RYR2Q92736 4967 aa7.41□□□□□ -1.22
HOXC12-201ENST00000243103 ABCA13Q86UQ4 5058 aa7.41□□□□□ -1.22
HOXC12-201ENST00000243103 RPS29P62273 56 aaKnown RBP7.4□□□□□ -1.23
HOXC12-201ENST00000243103 A0A1B0GVY2 172 aa7.37□□□□□ -1.23
HOXC12-201ENST00000243103 KRTAP10-4P60372 401 aaPredicted RBP7.37□□□□□ -1.23
HOXC12-201ENST00000243103 XP32Q5T750 250 aa7.36□□□□□ -1.23
HOXC12-201ENST00000243103 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
HOXC12-201ENST00000243103 KRTAP4-5Q9BYR2 181 aa7.26□□□□□ -1.25
HOXC12-201ENST00000243103 TNXBP22105 4242 aa7.15□□□□□ -1.26
HOXC12-201ENST00000243103 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
HOXC12-201ENST00000243103 J3QL48 77 aa7.11□□□□□ -1.27
HOXC12-201ENST00000243103 FAT4Q6V0I7 4981 aa7.08□□□□□ -1.28
HOXC12-201ENST00000243103 RNF213Q63HN8 5207 aa7.07□□□□□ -1.28
HOXC12-201ENST00000243103 MT1HL1P0DM35 61 aa7.05□□□□□ -1.28
HOXC12-201ENST00000243103 HERC1Q15751 4861 aa6.97□□□□□ -1.29
HOXC12-201ENST00000243103 HERC2O95714 4834 aa6.96□□□□□ -1.29
HOXC12-201ENST00000243103 SEC61BP60468 96 aaKnown RBP6.96□□□□□ -1.3
HOXC12-201ENST00000243103 KRTAP4-1Q9BYQ7 146 aa6.86□□□□□ -1.31
HOXC12-201ENST00000243103 UBR4Q5T4S7 5183 aa6.74□□□□□ -1.33
HOXC12-201ENST00000243103 M0R2T5 61 aa6.74□□□□□ -1.33
HOXC12-201ENST00000243103 TNP1P09430 55 aa6.7□□□□□ -1.34
HOXC12-201ENST00000243103 KRTAP21-3Q3LHN1 58 aa6.7□□□□□ -1.34
HOXC12-201ENST00000243103 PCLOQ9Y6V0 5065 aa6.69□□□□□ -1.34
HOXC12-201ENST00000243103 HMCN2Q8NDA2 5059 aa6.69□□□□□ -1.34
HOXC12-201ENST00000243103 PP632Q6XCG6 107 aa6.67□□□□□ -1.34
HOXC12-201ENST00000243103 MUC17Q685J3 4493 aa6.51□□□□□ -1.37
HOXC12-201ENST00000243103 FSIP2Q5CZC0 6907 aa6.49□□□□□ -1.37
HOXC12-201ENST00000243103 USH2AO75445 5202 aa6.45□□□□□ -1.38
HOXC12-201ENST00000243103 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
HOXC12-201ENST00000243103 LCE3AQ5TA76 89 aa6.34□□□□□ -1.39
HOXC12-201ENST00000243103 KMT2DO14686 5537 aa6.32□□□□□ -1.4
HOXC12-201ENST00000243103 KRTAP10-10P60014 251 aa6.31□□□□□ -1.4
HOXC12-201ENST00000243103 BIRC6Q9NR09 4857 aa6.22□□□□□ -1.41
HOXC12-201ENST00000243103 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
HOXC12-201ENST00000243103 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
HOXC12-201ENST00000243103 KRTAP19-2Q3LHN2 52 aa6.17□□□□□ -1.42
HOXC12-201ENST00000243103 INE1O15225 51 aa6.07□□□□□ -1.44
HOXC12-201ENST00000243103 OBSCNQ5VST9 7968 aa6.03□□□□□ -1.44
HOXC12-201ENST00000243103 KRTAP23-1A1A580 65 aa6□□□□□ -1.45
HOXC12-201ENST00000243103 MT1FP04733 61 aa6□□□□□ -1.45
HOXC12-201ENST00000243103 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
HOXC12-201ENST00000243103 LCE2CQ5TA81 110 aa5.96□□□□□ -1.45
HOXC12-201ENST00000243103 MT1HP80294 61 aa5.95□□□□□ -1.46
HOXC12-201ENST00000243103 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
HOXC12-201ENST00000243103 DSTQ03001 7570 aaKnown RBP5.91□□□□□ -1.46
HOXC12-201ENST00000243103 MT2AP02795 61 aa5.9□□□□□ -1.47
HOXC12-201ENST00000243103 KRTAP10-12P60413 245 aa5.79□□□□□ -1.48
HOXC12-201ENST00000243103 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
HOXC12-201ENST00000243103 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
HOXC12-201ENST00000243103 KRTAP8-1Q8IUC2 63 aa5.74□□□□□ -1.49
HOXC12-201ENST00000243103 KRTAP9-8Q9BYQ0 159 aa5.72□□□□□ -1.49
HOXC12-201ENST00000243103 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.5
HOXC12-201ENST00000243103 FCGBPQ9Y6R7 5405 aaPredicted RBP5.69□□□□□ -1.5
HOXC12-201ENST00000243103 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
HOXC12-201ENST00000243103 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
HOXC12-201ENST00000243103 MT1BP07438 61 aa5.63□□□□□ -1.51
HOXC12-201ENST00000243103 MT1XP80297 61 aa5.63□□□□□ -1.51
HOXC12-201ENST00000243103 KRTAP10-5P60370 271 aa5.62□□□□□ -1.51
HOXC12-201ENST00000243103 KRTAP4-7Q9BYR0 210 aa5.61□□□□□ -1.51
HOXC12-201ENST00000243103 CRCT1Q9UGL9 99 aa5.55□□□□□ -1.52
HOXC12-201ENST00000243103 KRTAP19-5Q3LI72 72 aa5.55□□□□□ -1.52
HOXC12-201ENST00000243103 MUC12Q9UKN1 5478 aa5.53□□□□□ -1.52
HOXC12-201ENST00000243103 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
HOXC12-201ENST00000243103 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
HOXC12-201ENST00000243103 LCE2BO14633 110 aa5.45□□□□□ -1.54
HOXC12-201ENST00000243103 KRTAP9-3Q9BYQ3 159 aa5.42□□□□□ -1.54
HOXC12-201ENST00000243103 KRTAP19-8Q3LI54 63 aa5.36□□□□□ -1.55
HOXC12-201ENST00000243103 SSPOA2VEC9 5147 aa5.33□□□□□ -1.56
HOXC12-201ENST00000243103 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
HOXC12-201ENST00000243103 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
HOXC12-201ENST00000243103 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms