RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 CSMD3Q7Z407 3707 aa6.06□□□□□ -1.44
TARDBP-201ENST00000240185 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
TARDBP-201ENST00000240185 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.45
TARDBP-201ENST00000240185 DNAH1Q9P2D7 4330 aa6.02□□□□□ -1.45
TARDBP-201ENST00000240185 LYSTQ99698 3801 aa6□□□□□ -1.45
TARDBP-201ENST00000240185 LCE3AQ5TA76 89 aa5.99□□□□□ -1.45
TARDBP-201ENST00000240185 DNAH10Q8IVF4 4471 aa5.99□□□□□ -1.45
TARDBP-201ENST00000240185 PLECQ15149 4684 aaKnown RBP5.99□□□□□ -1.45
TARDBP-201ENST00000240185 DYNC2H1Q8NCM8 4307 aaKnown RBP5.94□□□□□ -1.46
TARDBP-201ENST00000240185 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
TARDBP-201ENST00000240185 VPS13DQ5THJ4 4388 aa5.93□□□□□ -1.46
TARDBP-201ENST00000240185 DNAH17Q9UFH2 4485 aa5.87□□□□□ -1.47
TARDBP-201ENST00000240185 DNAH7Q8WXX0 4024 aa5.86□□□□□ -1.47
TARDBP-201ENST00000240185 MT1HL1P0DM35 61 aa5.85□□□□□ -1.47
TARDBP-201ENST00000240185 STARD9Q9P2P6 4700 aa5.85□□□□□ -1.47
TARDBP-201ENST00000240185 PRKDCP78527 4128 aaKnown RBP5.8□□□□□ -1.48
TARDBP-201ENST00000240185 LORP23490 312 aaPredicted RBP5.78□□□□□ -1.48
TARDBP-201ENST00000240185 DNAH2Q9P225 4427 aa5.75□□□□□ -1.49
TARDBP-201ENST00000240185 DNAH6Q9C0G6 4158 aa5.75□□□□□ -1.49
TARDBP-201ENST00000240185 KMT2AQ03164 3969 aa5.74□□□□□ -1.49
TARDBP-201ENST00000240185 DNHD1Q96M86 4753 aa5.73□□□□□ -1.49
TARDBP-201ENST00000240185 DNAH8Q96JB1 4490 aa5.7□□□□□ -1.5
TARDBP-201ENST00000240185 HECTD4Q9Y4D8 3996 aa5.68□□□□□ -1.5
TARDBP-201ENST00000240185 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
TARDBP-201ENST00000240185 DNAH11Q96DT5 4516 aa5.66□□□□□ -1.5
TARDBP-201ENST00000240185 FRAS1Q86XX4 4008 aa5.64□□□□□ -1.51
TARDBP-201ENST00000240185 DNAH5Q8TE73 4624 aa5.62□□□□□ -1.51
TARDBP-201ENST00000240185 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
TARDBP-201ENST00000240185 LRP1BQ9NZR2 4599 aa5.52□□□□□ -1.53
TARDBP-201ENST00000240185 DYNC1H1Q14204 4646 aaKnown RBP5.51□□□□□ -1.53
TARDBP-201ENST00000240185 HYDINQ4G0P3 5121 aa5.49□□□□□ -1.53
TARDBP-201ENST00000240185 SACSQ9NZJ4 4579 aa5.49□□□□□ -1.53
TARDBP-201ENST00000240185 FAT2Q9NYQ8 4349 aa5.48□□□□□ -1.53
TARDBP-201ENST00000240185 KRTAP4-5Q9BYR2 181 aa5.47□□□□□ -1.53
TARDBP-201ENST00000240185 VPS13BQ7Z7G8 4022 aa5.46□□□□□ -1.53
TARDBP-201ENST00000240185 PKD1P98161 4303 aa5.37□□□□□ -1.55
TARDBP-201ENST00000240185 PKHD1P08F94 4074 aa5.34□□□□□ -1.56
TARDBP-201ENST00000240185 FAT1Q14517 4588 aa5.33□□□□□ -1.56
TARDBP-201ENST00000240185 APOBP04114 4563 aaKnown RBP5.32□□□□□ -1.56
TARDBP-201ENST00000240185 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
TARDBP-201ENST00000240185 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
TARDBP-201ENST00000240185 RYR2Q92736 4967 aa5.23□□□□□ -1.57
TARDBP-201ENST00000240185 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
TARDBP-201ENST00000240185 SPRR2GQ9BYE4 73 aa5.22□□□□□ -1.57
TARDBP-201ENST00000240185 PKHD1L1Q86WI1 4243 aa5.2□□□□□ -1.58
TARDBP-201ENST00000240185 KRTAP4-1Q9BYQ7 146 aa5.18□□□□□ -1.58
TARDBP-201ENST00000240185 MT2AP02795 61 aa5.16□□□□□ -1.58
TARDBP-201ENST00000240185 FAT3Q8TDW7 4589 aa5.16□□□□□ -1.58
TARDBP-201ENST00000240185 KMT2CQ8NEZ4 4911 aaKnown RBP5.15□□□□□ -1.58
TARDBP-201ENST00000240185 MT1HP80294 61 aa5.13□□□□□ -1.59
TARDBP-201ENST00000240185 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
TARDBP-201ENST00000240185 KRTAP17-1Q9BYP8 105 aa5.1□□□□□ -1.59
TARDBP-201ENST00000240185 HSPG2P98160 4391 aa5.1□□□□□ -1.59
TARDBP-201ENST00000240185 LRP1Q07954 4544 aaKnown RBP5.08□□□□□ -1.6
TARDBP-201ENST00000240185 KRTAP19-4Q3LI73 84 aa5.07□□□□□ -1.6
TARDBP-201ENST00000240185 RYR1P21817 5038 aa5.07□□□□□ -1.6
TARDBP-201ENST00000240185 KRTAP12-4P60329 112 aa5.06□□□□□ -1.6
TARDBP-201ENST00000240185 TNXBP22105 4242 aa5.06□□□□□ -1.6
TARDBP-201ENST00000240185 MT1FP04733 61 aa5.04□□□□□ -1.6
TARDBP-201ENST00000240185 MYCBP2O75592 4640 aa4.99□□□□□ -1.61
TARDBP-201ENST00000240185 RYR3Q15413 4870 aa4.99□□□□□ -1.61
TARDBP-201ENST00000240185 LCE3BQ5TA77 95 aa4.99□□□□□ -1.61
TARDBP-201ENST00000240185 KIAA1109Q2LD37 5005 aa4.97□□□□□ -1.61
TARDBP-201ENST00000240185 EPPK1P58107 5090 aaKnown RBP4.85□□□□□ -1.63
TARDBP-201ENST00000240185 SPRR5A0A1B0GTR4 108 aa4.82□□□□□ -1.64
TARDBP-201ENST00000240185 MT1GP13640 62 aa4.81□□□□□ -1.64
TARDBP-201ENST00000240185 LPAP08519 4548 aa4.79□□□□□ -1.64
TARDBP-201ENST00000240185 LCE3DQ9BYE3 92 aa4.78□□□□□ -1.64
TARDBP-201ENST00000240185 KRTAP19-1Q8IUB9 90 aa4.75□□□□□ -1.65
TARDBP-201ENST00000240185 LRP2P98164 4655 aa4.75□□□□□ -1.65
TARDBP-201ENST00000240185 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
TARDBP-201ENST00000240185 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
TARDBP-201ENST00000240185 MT1XP80297 61 aa4.7□□□□□ -1.66
TARDBP-201ENST00000240185 SPRR2EP22531 72 aa4.7□□□□□ -1.66
TARDBP-201ENST00000240185 SPRR2BP35325 72 aa4.7□□□□□ -1.66
TARDBP-201ENST00000240185 SPRR2AP35326 72 aa4.7□□□□□ -1.66
TARDBP-201ENST00000240185 MUC17Q685J3 4493 aa4.69□□□□□ -1.66
TARDBP-201ENST00000240185 ABCA13Q86UQ4 5058 aa4.69□□□□□ -1.66
TARDBP-201ENST00000240185 BIRC6Q9NR09 4857 aa4.66□□□□□ -1.66
TARDBP-201ENST00000240185 HERC2O95714 4834 aa4.63□□□□□ -1.67
TARDBP-201ENST00000240185 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
TARDBP-201ENST00000240185 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
TARDBP-201ENST00000240185 MT1BP07438 61 aa4.56□□□□□ -1.68
TARDBP-201ENST00000240185 LCE2BO14633 110 aa4.56□□□□□ -1.68
TARDBP-201ENST00000240185 SPRR2DP22532 72 aa4.54□□□□□ -1.68
TARDBP-201ENST00000240185 KRTAP19-2Q3LHN2 52 aa4.54□□□□□ -1.68
TARDBP-201ENST00000240185 HERC1Q15751 4861 aa4.49□□□□□ -1.69
TARDBP-201ENST00000240185 LCE2CQ5TA81 110 aa4.48□□□□□ -1.69
TARDBP-201ENST00000240185 SYNE1Q8NF91 8797 aaKnown RBP4.47□□□□□ -1.69
TARDBP-201ENST00000240185 FLGP20930 4061 aaPredicted RBP4.46□□□□□ -1.7
TARDBP-201ENST00000240185 MUC2Q02817 5179 aa4.45□□□□□ -1.7
TARDBP-201ENST00000240185 PRM1P04553 51 aa4.45□□□□□ -1.7
TARDBP-201ENST00000240185 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
TARDBP-201ENST00000240185 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
TARDBP-201ENST00000240185 MT1LQ93083 61 aa4.39□□□□□ -1.71
TARDBP-201ENST00000240185 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
TARDBP-201ENST00000240185 PCLOQ9Y6V0 5065 aa4.33□□□□□ -1.72
TARDBP-201ENST00000240185 KRTAP9-3Q9BYQ3 159 aa4.3□□□□□ -1.72
TARDBP-201ENST00000240185 MT3P25713 68 aa4.27□□□□□ -1.73
TARDBP-201ENST00000240185 MT1EP04732 61 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms