RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 DNAH9Q9NYC9 4486 aa4.27□□□□□ -1.73
NUDCD1-201ENST00000239690 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
NUDCD1-201ENST00000239690 MT1HL1P0DM35 61 aa4.22□□□□□ -1.73
NUDCD1-201ENST00000239690 DNAH1Q9P2D7 4330 aa4.21□□□□□ -1.73
NUDCD1-201ENST00000239690 PLECQ15149 4684 aaKnown RBP4.2□□□□□ -1.74
NUDCD1-201ENST00000239690 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
NUDCD1-201ENST00000239690 DNAH11Q96DT5 4516 aa4.19□□□□□ -1.74
NUDCD1-201ENST00000239690 DNAH8Q96JB1 4490 aa4.18□□□□□ -1.74
NUDCD1-201ENST00000239690 DYNC2H1Q8NCM8 4307 aaKnown RBP4.16□□□□□ -1.74
NUDCD1-201ENST00000239690 DNAH17Q9UFH2 4485 aa4.15□□□□□ -1.74
NUDCD1-201ENST00000239690 PRKDCP78527 4128 aaKnown RBP4.13□□□□□ -1.75
NUDCD1-201ENST00000239690 VPS13DQ5THJ4 4388 aa4.12□□□□□ -1.75
NUDCD1-201ENST00000239690 DNHD1Q96M86 4753 aa4.12□□□□□ -1.75
NUDCD1-201ENST00000239690 DNAH2Q9P225 4427 aa4.11□□□□□ -1.75
NUDCD1-201ENST00000239690 LYSTQ99698 3801 aa4.11□□□□□ -1.75
NUDCD1-201ENST00000239690 STARD9Q9P2P6 4700 aa4.11□□□□□ -1.75
NUDCD1-201ENST00000239690 DNAH5Q8TE73 4624 aa4.1□□□□□ -1.75
NUDCD1-201ENST00000239690 DNAH7Q8WXX0 4024 aa4.08□□□□□ -1.76
NUDCD1-201ENST00000239690 LRP1BQ9NZR2 4599 aa4.06□□□□□ -1.76
NUDCD1-201ENST00000239690 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
NUDCD1-201ENST00000239690 KMT2AQ03164 3969 aa4.01□□□□□ -1.77
NUDCD1-201ENST00000239690 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
NUDCD1-201ENST00000239690 KRTAP10-12P60413 245 aa4□□□□□ -1.77
NUDCD1-201ENST00000239690 HECTD4Q9Y4D8 3996 aa3.98□□□□□ -1.77
NUDCD1-201ENST00000239690 FAT1Q14517 4588 aa3.96□□□□□ -1.78
NUDCD1-201ENST00000239690 DNAH6Q9C0G6 4158 aa3.94□□□□□ -1.78
NUDCD1-201ENST00000239690 FRAS1Q86XX4 4008 aa3.94□□□□□ -1.78
NUDCD1-201ENST00000239690 SACSQ9NZJ4 4579 aa3.92□□□□□ -1.78
NUDCD1-201ENST00000239690 VPS13BQ7Z7G8 4022 aa3.9□□□□□ -1.78
NUDCD1-201ENST00000239690 DYNC1H1Q14204 4646 aaKnown RBP3.9□□□□□ -1.78
NUDCD1-201ENST00000239690 HYDINQ4G0P3 5121 aa3.88□□□□□ -1.79
NUDCD1-201ENST00000239690 KRTAP4-1Q9BYQ7 146 aa3.86□□□□□ -1.79
NUDCD1-201ENST00000239690 APOBP04114 4563 aaKnown RBP3.85□□□□□ -1.79
NUDCD1-201ENST00000239690 KRTAP4-5Q9BYR2 181 aa3.85□□□□□ -1.79
NUDCD1-201ENST00000239690 MYCBP2O75592 4640 aa3.85□□□□□ -1.79
NUDCD1-201ENST00000239690 FAT2Q9NYQ8 4349 aa3.85□□□□□ -1.79
NUDCD1-201ENST00000239690 PKD1P98161 4303 aa3.84□□□□□ -1.8
NUDCD1-201ENST00000239690 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
NUDCD1-201ENST00000239690 SPRR2GQ9BYE4 73 aa3.78□□□□□ -1.8
NUDCD1-201ENST00000239690 KRTAP8-1Q8IUC2 63 aa3.78□□□□□ -1.81
NUDCD1-201ENST00000239690 PKHD1P08F94 4074 aa3.75□□□□□ -1.81
NUDCD1-201ENST00000239690 RYR2Q92736 4967 aa3.75□□□□□ -1.81
NUDCD1-201ENST00000239690 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
NUDCD1-201ENST00000239690 RYR1P21817 5038 aa3.69□□□□□ -1.82
NUDCD1-201ENST00000239690 KMT2CQ8NEZ4 4911 aaKnown RBP3.68□□□□□ -1.82
NUDCD1-201ENST00000239690 FAT3Q8TDW7 4589 aa3.67□□□□□ -1.82
NUDCD1-201ENST00000239690 MT2AP02795 61 aa3.62□□□□□ -1.83
NUDCD1-201ENST00000239690 CRCT1Q9UGL9 99 aa3.61□□□□□ -1.83
NUDCD1-201ENST00000239690 KRTAP19-1Q8IUB9 90 aa3.61□□□□□ -1.83
NUDCD1-201ENST00000239690 LRP2P98164 4655 aa3.6□□□□□ -1.83
NUDCD1-201ENST00000239690 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
NUDCD1-201ENST00000239690 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.84
NUDCD1-201ENST00000239690 RYR3Q15413 4870 aa3.58□□□□□ -1.84
NUDCD1-201ENST00000239690 KIAA1109Q2LD37 5005 aa3.58□□□□□ -1.84
NUDCD1-201ENST00000239690 MT1FP04733 61 aa3.58□□□□□ -1.84
NUDCD1-201ENST00000239690 MT1HP80294 61 aa3.58□□□□□ -1.84
NUDCD1-201ENST00000239690 HSPG2P98160 4391 aa3.58□□□□□ -1.84
NUDCD1-201ENST00000239690 KRTAP17-1Q9BYP8 105 aa3.57□□□□□ -1.84
NUDCD1-201ENST00000239690 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
NUDCD1-201ENST00000239690 KRTAP19-5Q3LI72 72 aa3.55□□□□□ -1.84
NUDCD1-201ENST00000239690 LCE2DQ5TA82 110 aaPredicted RBP3.52□□□□□ -1.85
NUDCD1-201ENST00000239690 TNXBP22105 4242 aa3.51□□□□□ -1.85
NUDCD1-201ENST00000239690 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
NUDCD1-201ENST00000239690 KRTAP10-7P60409 375 aaPredicted RBP3.48□□□□□ -1.85
NUDCD1-201ENST00000239690 EPPK1P58107 5090 aaKnown RBP3.47□□□□□ -1.85
NUDCD1-201ENST00000239690 MT1XP80297 61 aa3.46□□□□□ -1.86
NUDCD1-201ENST00000239690 KRTAP19-4Q3LI73 84 aa3.45□□□□□ -1.86
NUDCD1-201ENST00000239690 MT1BP07438 61 aa3.4□□□□□ -1.86
NUDCD1-201ENST00000239690 KRTAP19-2Q3LHN2 52 aa3.4□□□□□ -1.86
NUDCD1-201ENST00000239690 HERC2O95714 4834 aa3.34□□□□□ -1.87
NUDCD1-201ENST00000239690 ABCA13Q86UQ4 5058 aa3.34□□□□□ -1.88
NUDCD1-201ENST00000239690 LCE2CQ5TA81 110 aa3.33□□□□□ -1.88
NUDCD1-201ENST00000239690 BIRC6Q9NR09 4857 aa3.33□□□□□ -1.88
NUDCD1-201ENST00000239690 LPAP08519 4548 aa3.32□□□□□ -1.88
NUDCD1-201ENST00000239690 KRTAP9-8Q9BYQ0 159 aa3.32□□□□□ -1.88
NUDCD1-201ENST00000239690 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
NUDCD1-201ENST00000239690 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
NUDCD1-201ENST00000239690 FLGP20930 4061 aaPredicted RBP3.25□□□□□ -1.89
NUDCD1-201ENST00000239690 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
NUDCD1-201ENST00000239690 KRTAP4-8Q9BYQ9 185 aa3.23□□□□□ -1.89
NUDCD1-201ENST00000239690 KRTAP9-3Q9BYQ3 159 aa3.2□□□□□ -1.9
NUDCD1-201ENST00000239690 HERC1Q15751 4861 aa3.17□□□□□ -1.9
NUDCD1-201ENST00000239690 KRTAP4-7Q9BYR0 210 aa3.16□□□□□ -1.9
NUDCD1-201ENST00000239690 MT1GP13640 62 aa3.15□□□□□ -1.9
NUDCD1-201ENST00000239690 PCLOQ9Y6V0 5065 aa3.14□□□□□ -1.91
NUDCD1-201ENST00000239690 LCE3BQ5TA77 95 aa3.14□□□□□ -1.91
NUDCD1-201ENST00000239690 MT1LQ93083 61 aa3.11□□□□□ -1.91
NUDCD1-201ENST00000239690 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
NUDCD1-201ENST00000239690 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
NUDCD1-201ENST00000239690 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
NUDCD1-201ENST00000239690 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
NUDCD1-201ENST00000239690 SPRR2FQ96RM1 72 aa3.08□□□□□ -1.92
NUDCD1-201ENST00000239690 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
NUDCD1-201ENST00000239690 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
NUDCD1-201ENST00000239690 MUC2Q02817 5179 aa3.06□□□□□ -1.92
NUDCD1-201ENST00000239690 MT1EP04732 61 aa3.06□□□□□ -1.92
NUDCD1-201ENST00000239690 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
NUDCD1-201ENST00000239690 LCE2BO14633 110 aa3.03□□□□□ -1.92
NUDCD1-201ENST00000239690 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
NUDCD1-201ENST00000239690 RNF213Q63HN8 5207 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms