RNA–Protein interactions for RNA: ENST00000238856.8

AFTPH-202, Transcript of aftiphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AFTPH, Length 4,040 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFTPH-202ENST00000238856 KRTAP21-3Q3LHN1 58 aa8.41□□□□□ -1.06
AFTPH-202ENST00000238856 VPS13BQ7Z7G8 4022 aa8.37□□□□□ -1.07
AFTPH-202ENST00000238856 CAMK2N1Q7Z7J9 78 aa8.37□□□□□ -1.07
AFTPH-202ENST00000238856 PKHD1P08F94 4074 aa8.35□□□□□ -1.07
AFTPH-202ENST00000238856 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
AFTPH-202ENST00000238856 KRTAP13-4Q3LI77 160 aa8.34□□□□□ -1.07
AFTPH-202ENST00000238856 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
AFTPH-202ENST00000238856 KRTAP10-6P60371 365 aaPredicted RBP8.28□□□□□ -1.08
AFTPH-202ENST00000238856 DYNC1H1Q14204 4646 aaKnown RBP8.28□□□□□ -1.08
AFTPH-202ENST00000238856 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
AFTPH-202ENST00000238856 KRTAP3-3Q9BYR6 98 aa8.21□□□□□ -1.1
AFTPH-202ENST00000238856 ALMS1Q8TCU4 4167 aa8.21□□□□□ -1.1
AFTPH-202ENST00000238856 MYCBP2O75592 4640 aa8.2□□□□□ -1.1
AFTPH-202ENST00000238856 FAT2Q9NYQ8 4349 aa8.19□□□□□ -1.1
AFTPH-202ENST00000238856 TPRXLQ17RH7 258 aa8.16□□□□□ -1.1
AFTPH-202ENST00000238856 SACSQ9NZJ4 4579 aa8.15□□□□□ -1.1
AFTPH-202ENST00000238856 KMT2CQ8NEZ4 4911 aaKnown RBP8.14□□□□□ -1.11
AFTPH-202ENST00000238856 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
AFTPH-202ENST00000238856 PKD1P98161 4303 aa8.1□□□□□ -1.11
AFTPH-202ENST00000238856 KRTAP12-1P59990 96 aa8.08□□□□□ -1.12
AFTPH-202ENST00000238856 LRP1Q07954 4544 aaKnown RBP8.06□□□□□ -1.12
AFTPH-202ENST00000238856 M0R2T5 61 aa8.06□□□□□ -1.12
AFTPH-202ENST00000238856 MT1HL1P0DM35 61 aa8.05□□□□□ -1.12
AFTPH-202ENST00000238856 LUZP6Q538Z0 58 aa8.02□□□□□ -1.12
AFTPH-202ENST00000238856 APOBP04114 4563 aaKnown RBP7.99□□□□□ -1.13
AFTPH-202ENST00000238856 A0A0A0MQY5 61 aa7.99□□□□□ -1.13
AFTPH-202ENST00000238856 FAT3Q8TDW7 4589 aa7.93□□□□□ -1.14
AFTPH-202ENST00000238856 KIAA1109Q2LD37 5005 aa7.93□□□□□ -1.14
AFTPH-202ENST00000238856 RYR2Q92736 4967 aa7.89□□□□□ -1.15
AFTPH-202ENST00000238856 KRTAP4-5Q9BYR2 181 aa7.88□□□□□ -1.15
AFTPH-202ENST00000238856 RYR1P21817 5038 aa7.88□□□□□ -1.15
AFTPH-202ENST00000238856 RYR3Q15413 4870 aa7.83□□□□□ -1.16
AFTPH-202ENST00000238856 PLAC4Q8WY50 150 aa7.81□□□□□ -1.16
AFTPH-202ENST00000238856 KRTAP17-1Q9BYP8 105 aa7.76□□□□□ -1.17
AFTPH-202ENST00000238856 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
AFTPH-202ENST00000238856 TNP1P09430 55 aa7.69□□□□□ -1.18
AFTPH-202ENST00000238856 LRP2P98164 4655 aa7.69□□□□□ -1.18
AFTPH-202ENST00000238856 HSPG2P98160 4391 aa7.64□□□□□ -1.19
AFTPH-202ENST00000238856 PKHD1L1Q86WI1 4243 aa7.6□□□□□ -1.19
AFTPH-202ENST00000238856 KRTAP15-1Q3LI76 137 aa7.6□□□□□ -1.19
AFTPH-202ENST00000238856 EPPK1P58107 5090 aaKnown RBP7.6□□□□□ -1.19
AFTPH-202ENST00000238856 PP632Q6XCG6 107 aa7.56□□□□□ -1.2
AFTPH-202ENST00000238856 KRTAP4-1Q9BYQ7 146 aa7.53□□□□□ -1.2
AFTPH-202ENST00000238856 LPAP08519 4548 aa7.46□□□□□ -1.22
AFTPH-202ENST00000238856 KRTAP10-10P60014 251 aa7.44□□□□□ -1.22
AFTPH-202ENST00000238856 TNXBP22105 4242 aa7.43□□□□□ -1.22
AFTPH-202ENST00000238856 ABCA13Q86UQ4 5058 aa7.4□□□□□ -1.23
AFTPH-202ENST00000238856 HERC2O95714 4834 aa7.29□□□□□ -1.24
AFTPH-202ENST00000238856 MUC2Q02817 5179 aa7.23□□□□□ -1.25
AFTPH-202ENST00000238856 HERC1Q15751 4861 aa7.05□□□□□ -1.28
AFTPH-202ENST00000238856 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
AFTPH-202ENST00000238856 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
AFTPH-202ENST00000238856 FAT4Q6V0I7 4981 aa6.88□□□□□ -1.31
AFTPH-202ENST00000238856 PCLOQ9Y6V0 5065 aa6.88□□□□□ -1.31
AFTPH-202ENST00000238856 BIRC6Q9NR09 4857 aa6.87□□□□□ -1.31
AFTPH-202ENST00000238856 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
AFTPH-202ENST00000238856 KRTAP19-2Q3LHN2 52 aa6.82□□□□□ -1.32
AFTPH-202ENST00000238856 MT1HP80294 61 aa6.79□□□□□ -1.32
AFTPH-202ENST00000238856 SPRR2GQ9BYE4 73 aa6.76□□□□□ -1.33
AFTPH-202ENST00000238856 MT1FP04733 61 aa6.75□□□□□ -1.33
AFTPH-202ENST00000238856 MT2AP02795 61 aa6.75□□□□□ -1.33
AFTPH-202ENST00000238856 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
AFTPH-202ENST00000238856 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
AFTPH-202ENST00000238856 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
AFTPH-202ENST00000238856 UBR4Q5T4S7 5183 aa6.73□□□□□ -1.33
AFTPH-202ENST00000238856 MUC17Q685J3 4493 aa6.7□□□□□ -1.34
AFTPH-202ENST00000238856 KRTAP12-3P60328 96 aa6.7□□□□□ -1.34
AFTPH-202ENST00000238856 LCE2CQ5TA81 110 aa6.64□□□□□ -1.35
AFTPH-202ENST00000238856 FLGP20930 4061 aaPredicted RBP6.63□□□□□ -1.35
AFTPH-202ENST00000238856 HMCN2Q8NDA2 5059 aa6.6□□□□□ -1.35
AFTPH-202ENST00000238856 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
AFTPH-202ENST00000238856 KRTAP8-1Q8IUC2 63 aa6.42□□□□□ -1.38
AFTPH-202ENST00000238856 KRTAP10-7P60409 375 aaPredicted RBP6.4□□□□□ -1.38
AFTPH-202ENST00000238856 MT1BP07438 61 aa6.38□□□□□ -1.39
AFTPH-202ENST00000238856 MT1XP80297 61 aa6.38□□□□□ -1.39
AFTPH-202ENST00000238856 KRTAP10-5P60370 271 aa6.36□□□□□ -1.39
AFTPH-202ENST00000238856 KRTAP19-8Q3LI54 63 aa6.35□□□□□ -1.39
AFTPH-202ENST00000238856 SPRR5A0A1B0GTR4 108 aa6.34□□□□□ -1.39
AFTPH-202ENST00000238856 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
AFTPH-202ENST00000238856 INE1O15225 51 aa6.25□□□□□ -1.41
AFTPH-202ENST00000238856 KRTAP9-3Q9BYQ3 159 aa6.18□□□□□ -1.42
AFTPH-202ENST00000238856 FSIP2Q5CZC0 6907 aa6.17□□□□□ -1.42
AFTPH-202ENST00000238856 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
AFTPH-202ENST00000238856 KRTAP4-8A0A0G2JLE6 195 aa6.14□□□□□ -1.43
AFTPH-202ENST00000238856 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
AFTPH-202ENST00000238856 USH2AO75445 5202 aa6.13□□□□□ -1.43
AFTPH-202ENST00000238856 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
AFTPH-202ENST00000238856 LCE2BO14633 110 aa6.02□□□□□ -1.45
AFTPH-202ENST00000238856 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
AFTPH-202ENST00000238856 KMT2DO14686 5537 aa5.92□□□□□ -1.46
AFTPH-202ENST00000238856 MT1GP13640 62 aa5.61□□□□□ -1.51
AFTPH-202ENST00000238856 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
AFTPH-202ENST00000238856 KRTAP9-6A8MVA2 160 aa5.59□□□□□ -1.51
AFTPH-202ENST00000238856 MT1LQ93083 61 aa5.59□□□□□ -1.51
AFTPH-202ENST00000238856 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
AFTPH-202ENST00000238856 LCE2AQ5TA79 106 aaPredicted RBP5.58□□□□□ -1.52
AFTPH-202ENST00000238856 DSTQ03001 7570 aaKnown RBP5.58□□□□□ -1.52
AFTPH-202ENST00000238856 OBSCNQ5VST9 7968 aa5.58□□□□□ -1.52
AFTPH-202ENST00000238856 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
AFTPH-202ENST00000238856 MT1EP04732 61 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms