RNA–Protein interactions for RNA: ENST00000223122.3

C1GALT1-201, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1GALT1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-201ENST00000223122 LORP23490 312 aaPredicted RBP3.61□□□□□ -1.83
C1GALT1-201ENST00000223122 PLECQ15149 4684 aaKnown RBP3.59□□□□□ -1.83
C1GALT1-201ENST00000223122 KRTAP10-12P60413 245 aa3.56□□□□□ -1.84
C1GALT1-201ENST00000223122 DNAH17Q9UFH2 4485 aa3.55□□□□□ -1.84
C1GALT1-201ENST00000223122 DNAH2Q9P225 4427 aa3.54□□□□□ -1.84
C1GALT1-201ENST00000223122 COL7A1Q02388 2944 aa3.53□□□□□ -1.84
C1GALT1-201ENST00000223122 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
C1GALT1-201ENST00000223122 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
C1GALT1-201ENST00000223122 CMYA5Q8N3K9 4069 aa3.53□□□□□ -1.84
C1GALT1-201ENST00000223122 ANK2Q01484 3957 aa3.52□□□□□ -1.85
C1GALT1-201ENST00000223122 VPS13DQ5THJ4 4388 aa3.52□□□□□ -1.85
C1GALT1-201ENST00000223122 FRAS1Q86XX4 4008 aa3.52□□□□□ -1.85
C1GALT1-201ENST00000223122 DNAH11Q96DT5 4516 aa3.51□□□□□ -1.85
C1GALT1-201ENST00000223122 DNAH5Q8TE73 4624 aa3.49□□□□□ -1.85
C1GALT1-201ENST00000223122 DNAH8Q96JB1 4490 aa3.48□□□□□ -1.85
C1GALT1-201ENST00000223122 STARD9Q9P2P6 4700 aa3.48□□□□□ -1.85
C1GALT1-201ENST00000223122 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
C1GALT1-201ENST00000223122 INE1O15225 51 aa3.46□□□□□ -1.86
C1GALT1-201ENST00000223122 KMT2AQ03164 3969 aa3.45□□□□□ -1.86
C1GALT1-201ENST00000223122 KRTAP4-1Q9BYQ7 146 aa3.43□□□□□ -1.86
C1GALT1-201ENST00000223122 DYNC2H1Q8NCM8 4307 aaKnown RBP3.42□□□□□ -1.86
C1GALT1-201ENST00000223122 FAT2Q9NYQ8 4349 aa3.41□□□□□ -1.86
C1GALT1-201ENST00000223122 LYSTQ99698 3801 aa3.41□□□□□ -1.86
C1GALT1-201ENST00000223122 KRTAP23-1A1A580 65 aa3.38□□□□□ -1.87
C1GALT1-201ENST00000223122 PRKDCP78527 4128 aaKnown RBP3.38□□□□□ -1.87
C1GALT1-201ENST00000223122 LRP1BQ9NZR2 4599 aa3.38□□□□□ -1.87
C1GALT1-201ENST00000223122 VPS13BQ7Z7G8 4022 aa3.38□□□□□ -1.87
C1GALT1-201ENST00000223122 DNAH7Q8WXX0 4024 aa3.36□□□□□ -1.87
C1GALT1-201ENST00000223122 SACSQ9NZJ4 4579 aa3.36□□□□□ -1.87
C1GALT1-201ENST00000223122 DNAH6Q9C0G6 4158 aa3.34□□□□□ -1.88
C1GALT1-201ENST00000223122 DYNC1H1Q14204 4646 aaKnown RBP3.33□□□□□ -1.88
C1GALT1-201ENST00000223122 HECTD4Q9Y4D8 3996 aa3.32□□□□□ -1.88
C1GALT1-201ENST00000223122 MT1HP80294 61 aa3.29□□□□□ -1.88
C1GALT1-201ENST00000223122 FAT1Q14517 4588 aa3.28□□□□□ -1.88
C1GALT1-201ENST00000223122 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
C1GALT1-201ENST00000223122 MT2AP02795 61 aa3.22□□□□□ -1.89
C1GALT1-201ENST00000223122 KRTAP8-1Q8IUC2 63 aa3.22□□□□□ -1.89
C1GALT1-201ENST00000223122 APOBP04114 4563 aaKnown RBP3.2□□□□□ -1.9
C1GALT1-201ENST00000223122 DNHD1Q96M86 4753 aa3.2□□□□□ -1.9
C1GALT1-201ENST00000223122 MT1FP04733 61 aa3.19□□□□□ -1.9
C1GALT1-201ENST00000223122 SPRR2GQ9BYE4 73 aa3.19□□□□□ -1.9
C1GALT1-201ENST00000223122 KRTAP17-1Q9BYP8 105 aa3.18□□□□□ -1.9
C1GALT1-201ENST00000223122 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
C1GALT1-201ENST00000223122 FAT3Q8TDW7 4589 aa3.13□□□□□ -1.91
C1GALT1-201ENST00000223122 RYR1P21817 5038 aa3.1□□□□□ -1.91
C1GALT1-201ENST00000223122 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
C1GALT1-201ENST00000223122 KRTAP10-7P60409 375 aaPredicted RBP3.07□□□□□ -1.92
C1GALT1-201ENST00000223122 HYDINQ4G0P3 5121 aa3.06□□□□□ -1.92
C1GALT1-201ENST00000223122 LRP1Q07954 4544 aaKnown RBP3.06□□□□□ -1.92
C1GALT1-201ENST00000223122 HSPG2P98160 4391 aa3.04□□□□□ -1.92
C1GALT1-201ENST00000223122 MYCBP2O75592 4640 aa3.03□□□□□ -1.92
C1GALT1-201ENST00000223122 LPAP08519 4548 aa3.03□□□□□ -1.93
C1GALT1-201ENST00000223122 PKD1P98161 4303 aa3.02□□□□□ -1.93
C1GALT1-201ENST00000223122 PKHD1L1Q86WI1 4243 aa3.02□□□□□ -1.93
C1GALT1-201ENST00000223122 RYR3Q15413 4870 aa3.01□□□□□ -1.93
C1GALT1-201ENST00000223122 KRTAP19-1Q8IUB9 90 aa3□□□□□ -1.93
C1GALT1-201ENST00000223122 SPRR2FQ96RM1 72 aa3□□□□□ -1.93
C1GALT1-201ENST00000223122 TNXBP22105 4242 aa3□□□□□ -1.93
C1GALT1-201ENST00000223122 PKHD1P08F94 4074 aa3□□□□□ -1.93
C1GALT1-201ENST00000223122 KIAA1109Q2LD37 5005 aa2.99□□□□□ -1.93
C1GALT1-201ENST00000223122 MT1XP80297 61 aa2.97□□□□□ -1.93
C1GALT1-201ENST00000223122 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
C1GALT1-201ENST00000223122 MT1BP07438 61 aa2.92□□□□□ -1.94
C1GALT1-201ENST00000223122 RYR2Q92736 4967 aa2.91□□□□□ -1.94
C1GALT1-201ENST00000223122 KRTAP9-8Q9BYQ0 159 aa2.89□□□□□ -1.95
C1GALT1-201ENST00000223122 KRTAP4-8A0A0G2JLE6 195 aa2.89□□□□□ -1.95
C1GALT1-201ENST00000223122 KRTAP4-8Q9BYQ9 185 aa2.89□□□□□ -1.95
C1GALT1-201ENST00000223122 LCE3BQ5TA77 95 aa2.88□□□□□ -1.95
C1GALT1-201ENST00000223122 MT1GP13640 62 aa2.88□□□□□ -1.95
C1GALT1-201ENST00000223122 LCE2CQ5TA81 110 aa2.86□□□□□ -1.95
C1GALT1-201ENST00000223122 LRP2P98164 4655 aa2.86□□□□□ -1.95
C1GALT1-201ENST00000223122 KMT2CQ8NEZ4 4911 aaKnown RBP2.85□□□□□ -1.95
C1GALT1-201ENST00000223122 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.96
C1GALT1-201ENST00000223122 KRTAP9-3Q9BYQ3 159 aa2.81□□□□□ -1.96
C1GALT1-201ENST00000223122 SPRR2EP22531 72 aa2.81□□□□□ -1.96
C1GALT1-201ENST00000223122 SPRR2BP35325 72 aa2.81□□□□□ -1.96
C1GALT1-201ENST00000223122 SPRR2AP35326 72 aa2.81□□□□□ -1.96
C1GALT1-201ENST00000223122 MUC17Q685J3 4493 aa2.8□□□□□ -1.96
C1GALT1-201ENST00000223122 KRTAP4-7Q9BYR0 210 aa2.78□□□□□ -1.96
C1GALT1-201ENST00000223122 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
C1GALT1-201ENST00000223122 HERC1Q15751 4861 aa2.77□□□□□ -1.97
C1GALT1-201ENST00000223122 BIRC6Q9NR09 4857 aa2.76□□□□□ -1.97
C1GALT1-201ENST00000223122 KRTAP19-4Q3LI73 84 aa2.76□□□□□ -1.97
C1GALT1-201ENST00000223122 HERC2O95714 4834 aa2.75□□□□□ -1.97
C1GALT1-201ENST00000223122 KRTAP19-2Q3LHN2 52 aa2.74□□□□□ -1.97
C1GALT1-201ENST00000223122 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
C1GALT1-201ENST00000223122 SPRR2DP22532 72 aa2.71□□□□□ -1.98
C1GALT1-201ENST00000223122 LCE2BO14633 110 aa2.7□□□□□ -1.98
C1GALT1-201ENST00000223122 EPPK1P58107 5090 aaKnown RBP2.68□□□□□ -1.98
C1GALT1-201ENST00000223122 MT1LQ93083 61 aa2.66□□□□□ -1.98
C1GALT1-201ENST00000223122 ABCA13Q86UQ4 5058 aa2.66□□□□□ -1.98
C1GALT1-201ENST00000223122 LOC100996750A0A140TA64 210 aa2.64□□□□□ -1.99
C1GALT1-201ENST00000223122 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
C1GALT1-201ENST00000223122 MT1EP04732 61 aa2.63□□□□□ -1.99
C1GALT1-201ENST00000223122 KRTAP19-3Q7Z4W3 81 aa2.62□□□□□ -1.99
C1GALT1-201ENST00000223122 KRTAP4-3Q9BYR4 195 aa2.6□□□□□ -1.99
C1GALT1-201ENST00000223122 LCE3EQ5T5B0 92 aa2.59□□□□□ -2
C1GALT1-201ENST00000223122 LCE2DQ5TA82 110 aaPredicted RBP2.58□□□□□ -2
C1GALT1-201ENST00000223122 PCLOQ9Y6V0 5065 aa2.56□□□□□ -2
C1GALT1-201ENST00000223122 MT1MQ8N339 61 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms