RNA–Protein interactions for RNA: ENST00000056233.3

NFE2L3-201, Transcript of nuclear factor, erythroid 2 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFE2L3, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE2L3-201ENST00000056233 KRTAP12-2P59991 146 aa8.59□□□□□ -1.03
NFE2L3-201ENST00000056233 KRTAP10-6P60371 365 aaPredicted RBP8.59□□□□□ -1.03
NFE2L3-201ENST00000056233 XP32Q5T750 250 aa8.57□□□□□ -1.04
NFE2L3-201ENST00000056233 A0A0A0MQY5 61 aa8.51□□□□□ -1.05
NFE2L3-201ENST00000056233 HYDINQ4G0P3 5121 aa8.49□□□□□ -1.05
NFE2L3-201ENST00000056233 CAMK2N1Q7Z7J9 78 aa8.47□□□□□ -1.05
NFE2L3-201ENST00000056233 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.05
NFE2L3-201ENST00000056233 DYNC2H1Q8NCM8 4307 aaKnown RBP8.46□□□□□ -1.06
NFE2L3-201ENST00000056233 PKHD1P08F94 4074 aa8.42□□□□□ -1.06
NFE2L3-201ENST00000056233 KRTAP3-2Q9BYR7 98 aa8.42□□□□□ -1.06
NFE2L3-201ENST00000056233 DYNC1H1Q14204 4646 aaKnown RBP8.4□□□□□ -1.06
NFE2L3-201ENST00000056233 KRTAP12-1P59990 96 aa8.38□□□□□ -1.07
NFE2L3-201ENST00000056233 FAT2Q9NYQ8 4349 aa8.35□□□□□ -1.07
NFE2L3-201ENST00000056233 LUZP6Q538Z0 58 aa8.34□□□□□ -1.07
NFE2L3-201ENST00000056233 LRP1Q07954 4544 aaKnown RBP8.34□□□□□ -1.07
NFE2L3-201ENST00000056233 A0A1B0GVY2 172 aa8.3□□□□□ -1.08
NFE2L3-201ENST00000056233 FAT3Q8TDW7 4589 aa8.28□□□□□ -1.08
NFE2L3-201ENST00000056233 KRTAP10-4P60372 401 aaPredicted RBP8.27□□□□□ -1.09
NFE2L3-201ENST00000056233 J3QL48 77 aa8.26□□□□□ -1.09
NFE2L3-201ENST00000056233 APOBP04114 4563 aaKnown RBP8.21□□□□□ -1.09
NFE2L3-201ENST00000056233 PLAC4Q8WY50 150 aa8.19□□□□□ -1.1
NFE2L3-201ENST00000056233 SACSQ9NZJ4 4579 aa8.19□□□□□ -1.1
NFE2L3-201ENST00000056233 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
NFE2L3-201ENST00000056233 PKD1P98161 4303 aa8.1□□□□□ -1.11
NFE2L3-201ENST00000056233 SEC61BP60468 96 aaKnown RBP8.06□□□□□ -1.12
NFE2L3-201ENST00000056233 HSPG2P98160 4391 aa8□□□□□ -1.13
NFE2L3-201ENST00000056233 LRP2P98164 4655 aa7.98□□□□□ -1.13
NFE2L3-201ENST00000056233 LORP23490 312 aaPredicted RBP7.97□□□□□ -1.13
NFE2L3-201ENST00000056233 KIAA1109Q2LD37 5005 aa7.97□□□□□ -1.13
NFE2L3-201ENST00000056233 RYR1P21817 5038 aa7.94□□□□□ -1.14
NFE2L3-201ENST00000056233 KMT2CQ8NEZ4 4911 aaKnown RBP7.94□□□□□ -1.14
NFE2L3-201ENST00000056233 MT1HL1P0DM35 61 aa7.92□□□□□ -1.14
NFE2L3-201ENST00000056233 KRTAP21-3Q3LHN1 58 aa7.9□□□□□ -1.15
NFE2L3-201ENST00000056233 M0R2T5 61 aa7.88□□□□□ -1.15
NFE2L3-201ENST00000056233 LPAP08519 4548 aa7.79□□□□□ -1.16
NFE2L3-201ENST00000056233 KRTAP17-1Q9BYP8 105 aa7.79□□□□□ -1.16
NFE2L3-201ENST00000056233 TNP1P09430 55 aa7.78□□□□□ -1.16
NFE2L3-201ENST00000056233 KRTAP4-5Q9BYR2 181 aa7.75□□□□□ -1.17
NFE2L3-201ENST00000056233 RYR3Q15413 4870 aa7.75□□□□□ -1.17
NFE2L3-201ENST00000056233 PKHD1L1Q86WI1 4243 aa7.72□□□□□ -1.17
NFE2L3-201ENST00000056233 PP632Q6XCG6 107 aa7.67□□□□□ -1.18
NFE2L3-201ENST00000056233 RYR2Q92736 4967 aa7.61□□□□□ -1.19
NFE2L3-201ENST00000056233 KRTAP4-1Q9BYQ7 146 aa7.57□□□□□ -1.2
NFE2L3-201ENST00000056233 TNXBP22105 4242 aa7.5□□□□□ -1.21
NFE2L3-201ENST00000056233 EPPK1P58107 5090 aaKnown RBP7.44□□□□□ -1.22
NFE2L3-201ENST00000056233 ABCA13Q86UQ4 5058 aa7.42□□□□□ -1.22
NFE2L3-201ENST00000056233 MUC2Q02817 5179 aa7.41□□□□□ -1.22
NFE2L3-201ENST00000056233 KRTAP10-10P60014 251 aa7.33□□□□□ -1.24
NFE2L3-201ENST00000056233 LCE3AQ5TA76 89 aa7.15□□□□□ -1.27
NFE2L3-201ENST00000056233 HERC2O95714 4834 aa7.14□□□□□ -1.27
NFE2L3-201ENST00000056233 FAT4Q6V0I7 4981 aa7.08□□□□□ -1.28
NFE2L3-201ENST00000056233 HERC1Q15751 4861 aa6.94□□□□□ -1.3
NFE2L3-201ENST00000056233 RNF213Q63HN8 5207 aa6.92□□□□□ -1.3
NFE2L3-201ENST00000056233 MUC17Q685J3 4493 aa6.87□□□□□ -1.31
NFE2L3-201ENST00000056233 KRTAP19-2Q3LHN2 52 aa6.85□□□□□ -1.31
NFE2L3-201ENST00000056233 KRTAP12-3P60328 96 aa6.81□□□□□ -1.32
NFE2L3-201ENST00000056233 KRTAP10-12P60413 245 aa6.79□□□□□ -1.32
NFE2L3-201ENST00000056233 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
NFE2L3-201ENST00000056233 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
NFE2L3-201ENST00000056233 PRO2289Q9P1D8 64 aa6.74□□□□□ -1.33
NFE2L3-201ENST00000056233 MT1FP04733 61 aa6.74□□□□□ -1.33
NFE2L3-201ENST00000056233 PCLOQ9Y6V0 5065 aa6.74□□□□□ -1.33
NFE2L3-201ENST00000056233 FLGP20930 4061 aaPredicted RBP6.72□□□□□ -1.33
NFE2L3-201ENST00000056233 SPRR2GQ9BYE4 73 aa6.72□□□□□ -1.33
NFE2L3-201ENST00000056233 HMCN2Q8NDA2 5059 aa6.69□□□□□ -1.34
NFE2L3-201ENST00000056233 MT2AP02795 61 aa6.68□□□□□ -1.34
NFE2L3-201ENST00000056233 BIRC6Q9NR09 4857 aa6.68□□□□□ -1.34
NFE2L3-201ENST00000056233 SPRR5A0A1B0GTR4 108 aa6.68□□□□□ -1.34
NFE2L3-201ENST00000056233 MT1HP80294 61 aa6.67□□□□□ -1.34
NFE2L3-201ENST00000056233 UBR4Q5T4S7 5183 aa6.66□□□□□ -1.34
NFE2L3-201ENST00000056233 INE1O15225 51 aa6.58□□□□□ -1.36
NFE2L3-201ENST00000056233 LCE2CQ5TA81 110 aa6.57□□□□□ -1.36
NFE2L3-201ENST00000056233 KRTAP10-7P60409 375 aaPredicted RBP6.53□□□□□ -1.36
NFE2L3-201ENST00000056233 KRTAP8-1Q8IUC2 63 aa6.53□□□□□ -1.36
NFE2L3-201ENST00000056233 MT1XP80297 61 aa6.44□□□□□ -1.38
NFE2L3-201ENST00000056233 KRTAP10-5P60370 271 aa6.43□□□□□ -1.38
NFE2L3-201ENST00000056233 MT1BP07438 61 aa6.38□□□□□ -1.39
NFE2L3-201ENST00000056233 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
NFE2L3-201ENST00000056233 KRTAP9-8Q9BYQ0 159 aa6.38□□□□□ -1.39
NFE2L3-201ENST00000056233 KMT2DO14686 5537 aa6.35□□□□□ -1.39
NFE2L3-201ENST00000056233 USH2AO75445 5202 aa6.34□□□□□ -1.39
NFE2L3-201ENST00000056233 CRCT1Q9UGL9 99 aa6.33□□□□□ -1.4
NFE2L3-201ENST00000056233 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
NFE2L3-201ENST00000056233 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
NFE2L3-201ENST00000056233 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
NFE2L3-201ENST00000056233 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
NFE2L3-201ENST00000056233 LCE3CQ5T5A8 94 aa6.22□□□□□ -1.41
NFE2L3-201ENST00000056233 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
NFE2L3-201ENST00000056233 OBSCNQ5VST9 7968 aa6.1□□□□□ -1.43
NFE2L3-201ENST00000056233 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
NFE2L3-201ENST00000056233 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
NFE2L3-201ENST00000056233 DSTQ03001 7570 aaKnown RBP5.98□□□□□ -1.45
NFE2L3-201ENST00000056233 LCE2BO14633 110 aa5.96□□□□□ -1.46
NFE2L3-201ENST00000056233 KRTAP9-6A8MVA2 160 aa5.9□□□□□ -1.47
NFE2L3-201ENST00000056233 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
NFE2L3-201ENST00000056233 LOC100996750A0A140TA64 210 aa5.73□□□□□ -1.49
NFE2L3-201ENST00000056233 MT1GP13640 62 aa5.73□□□□□ -1.49
NFE2L3-201ENST00000056233 KRTAP4-3Q9BYR4 195 aa5.71□□□□□ -1.5
NFE2L3-201ENST00000056233 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
NFE2L3-201ENST00000056233 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms