RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Mbd3l2Q3UXB0 228 aa12.16□□□□□ -0.46
Trim50-201ENSMUST00000065785 Gm94Q3V2D2 93 aa12.16□□□□□ -0.46
Trim50-201ENSMUST00000065785 Tnfsf18Q7TS55 173 aa12.16□□□□□ -0.46
Trim50-201ENSMUST00000065785 Leprotl1Q9CQ74 131 aa12.16□□□□□ -0.46
Trim50-201ENSMUST00000065785 Dpm3Q9D1Q4 92 aa12.16□□□□□ -0.46
Trim50-201ENSMUST00000065785 Tmem52Q9D702 196 aa12.16□□□□□ -0.46
Trim50-201ENSMUST00000065785 Trdv2-2Q5R1A4 116 aa12.16□□□□□ -0.46
Trim50-201ENSMUST00000065785 CnfnQ6PCW6 111 aa12.16□□□□□ -0.46
Trim50-201ENSMUST00000065785 Olfr1195Q8VG21 308 aa12.16□□□□□ -0.46
Trim50-201ENSMUST00000065785 Shisa9Q9CZN4 424 aa12.16□□□□□ -0.46
Trim50-201ENSMUST00000065785 Hcfc2Q9D968 241 aa12.16□□□□□ -0.46
Trim50-201ENSMUST00000065785 Cml3Q9JIY8 226 aa12.16□□□□□ -0.46
Trim50-201ENSMUST00000065785 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP12.15□□□□□ -0.46
Trim50-201ENSMUST00000065785 Tcf21O35437 179 aa12.15□□□□□ -0.46
Trim50-201ENSMUST00000065785 Fgf5P15656 264 aa12.15□□□□□ -0.46
Trim50-201ENSMUST00000065785 UrahQ9CRB3 118 aa12.15□□□□□ -0.46
Trim50-201ENSMUST00000065785 Cnn3Q9DAW9 330 aaKnown RBP12.15□□□□□ -0.46
Trim50-201ENSMUST00000065785 Plpp2Q9DAX2 276 aa12.15□□□□□ -0.46
Trim50-201ENSMUST00000065785 Med13lQ6JPI3 2207 aa12.15□□□□□ -0.47
Trim50-201ENSMUST00000065785 Tmem241Q3UME2 297 aa12.14□□□□□ -0.47
Trim50-201ENSMUST00000065785 Tnfsf15Q5UBV8 252 aa12.14□□□□□ -0.47
Trim50-201ENSMUST00000065785 RnasekQ8K3C0 98 aa12.14□□□□□ -0.47
Trim50-201ENSMUST00000065785 Olfr1431Q8VF59 312 aa12.14□□□□□ -0.47
Trim50-201ENSMUST00000065785 Olfr365Q8VFT2 312 aa12.14□□□□□ -0.47
Trim50-201ENSMUST00000065785 Borcs7Q9CRC6 105 aa12.14□□□□□ -0.47
Trim50-201ENSMUST00000065785 Q9DAB9 146 aa12.14□□□□□ -0.47
Trim50-201ENSMUST00000065785 Gm9913Q8BQQ2 135 aa12.14□□□□□ -0.47
Trim50-201ENSMUST00000065785 Gtsf1lQ9CWD0 151 aa12.14□□□□□ -0.47
Trim50-201ENSMUST00000065785 Foxc2Q61850 494 aa12.13□□□□□ -0.47
Trim50-201ENSMUST00000065785 Zfp248Q640N4 576 aa12.13□□□□□ -0.47
Trim50-201ENSMUST00000065785 Hspe1Q64433 102 aaKnown RBP12.13□□□□□ -0.47
Trim50-201ENSMUST00000065785 Psmb11Q8BG41 302 aa12.13□□□□□ -0.47
Trim50-201ENSMUST00000065785 Ifitm2Q99J93 144 aa12.13□□□□□ -0.47
Trim50-201ENSMUST00000065785 Rbm7Q9CQT2 265 aaKnown RBP12.13□□□□□ -0.47
Trim50-201ENSMUST00000065785 Ighv1-16A0A075B5U1 98 aa12.12□□□□□ -0.47
Trim50-201ENSMUST00000065785 Ighv1-80A0A075B5Y3 117 aa12.12□□□□□ -0.47
Trim50-201ENSMUST00000065785 Trav12-3A0A075B648 115 aa12.12□□□□□ -0.47
Trim50-201ENSMUST00000065785 Hist2h2beQ64524 126 aa12.12□□□□□ -0.47
Trim50-201ENSMUST00000065785 Vsig8Q6P3A4 417 aa12.12□□□□□ -0.47
Trim50-201ENSMUST00000065785 Vmn1r202Q8R259 302 aa12.12□□□□□ -0.47
Trim50-201ENSMUST00000065785 Vmn1r63Q9EPT1 300 aa12.12□□□□□ -0.47
Trim50-201ENSMUST00000065785 Pla2g2eQ9QUL3 142 aa12.12□□□□□ -0.47
Trim50-201ENSMUST00000065785 Ube2l6Q9QZU9 153 aa12.12□□□□□ -0.47
Trim50-201ENSMUST00000065785 Chd6A3KFM7 2711 aa12.12□□□□□ -0.47
Trim50-201ENSMUST00000065785 Trav6-4A0A075B6B4 115 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 1810011H11RikE9PVZ2 95 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Zfp867E9Q2M4 473 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Gm20517G3UVU6 152 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Smad7O35253 426 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 TbpP29037 316 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 7420426K07RikQ3UX66 186 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Ormdl3Q9CPZ6 153 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Mrpl53Q9D1H8 118 aaKnown RBP12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Q9D7E4 109 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Prrc2aQ7TSC1 2158 aaKnown RBP12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Igkv4-57-1A0A075B5M4 119 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Ighv1-23A0A0A6YVW3 117 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Igkv4-81A0A0G2JEY5 119 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 P01793 123 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Fabp4P04117 132 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Pmp2P24526 132 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Ndufa4l2Q4FZG9 87 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Odf1Q61999 247 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Gm5105Q8C6Y9 112 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Olfr1262Q8VGN2 304 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 RhohQ9D3G9 191 aa12.11□□□□□ -0.47
Trim50-201ENSMUST00000065785 Gm10521E9PZK0 135 aa12.1□□□□□ -0.47
Trim50-201ENSMUST00000065785 Arl11Q6P3A9 176 aa12.1□□□□□ -0.47
Trim50-201ENSMUST00000065785 Igkv4-71A0A0G2JEH0 117 aa12.09□□□□□ -0.47
Trim50-201ENSMUST00000065785 Gm21994F6T2D2 329 aa12.09□□□□□ -0.47
Trim50-201ENSMUST00000065785 Spock3Q8BKV0 436 aa12.09□□□□□ -0.47
Trim50-201ENSMUST00000065785 Fam103a1Q9CQY2 119 aaKnown RBP12.09□□□□□ -0.47
Trim50-201ENSMUST00000065785 Krtap26-1Q9D7N2 215 aa12.09□□□□□ -0.47
Trim50-201ENSMUST00000065785 Ighv1-82A0A0G2JEU7 117 aa12.09□□□□□ -0.47
Trim50-201ENSMUST00000065785 9130213A22RikQ3V3T2 120 aa12.09□□□□□ -0.47
Trim50-201ENSMUST00000065785 Srsf12Q8C8K3 266 aa12.09□□□□□ -0.47
Trim50-201ENSMUST00000065785 Igkv4-70A0A0B4J1I5 116 aa12.08□□□□□ -0.48
Trim50-201ENSMUST00000065785 Trav19A0A0B4J1K4 119 aa12.08□□□□□ -0.48
Trim50-201ENSMUST00000065785 Ighv9-1A0A0B4J1P3 117 aa12.08□□□□□ -0.48
Trim50-201ENSMUST00000065785 Tctex1d4Q8CDY7 219 aa12.08□□□□□ -0.48
Trim50-201ENSMUST00000065785 Zmat5Q9CQR5 170 aa12.08□□□□□ -0.48
Trim50-201ENSMUST00000065785 Cited2O35740 269 aa12.07□□□□□ -0.48
Trim50-201ENSMUST00000065785 Gm9961Q8BNV2 113 aa12.07□□□□□ -0.48
Trim50-201ENSMUST00000065785 Bex1Q9R224 128 aa12.07□□□□□ -0.48
Trim50-201ENSMUST00000065785 Olfr1245A0A1L1SQJ6 307 aa12.07□□□□□ -0.48
Trim50-201ENSMUST00000065785 Gm10188Q3V432 135 aa12.07□□□□□ -0.48
Trim50-201ENSMUST00000065785 Q4KKZ1 196 aa12.07□□□□□ -0.48
Trim50-201ENSMUST00000065785 Pam16Q9CQV1 125 aa12.07□□□□□ -0.48
Trim50-201ENSMUST00000065785 CcsQ9WU84 274 aa12.07□□□□□ -0.48
Trim50-201ENSMUST00000065785 9530053A07RikE9PVG8 2581 aa12.06□□□□□ -0.48
Trim50-201ENSMUST00000065785 Pdzd2E9Q1M1 2796 aa12.06□□□□□ -0.48
Trim50-201ENSMUST00000065785 Igkv4-69A0A0B4J1I6 116 aa12.06□□□□□ -0.48
Trim50-201ENSMUST00000065785 Gm9376G3UW68 176 aa12.06□□□□□ -0.48
Trim50-201ENSMUST00000065785 Gm5148Q8BGG2 154 aa12.06□□□□□ -0.48
Trim50-201ENSMUST00000065785 Nit2Q9JHW2 276 aa12.06□□□□□ -0.48
Trim50-201ENSMUST00000065785 Ighv1-9A0A0A6YW37 117 aa12.05□□□□□ -0.48
Trim50-201ENSMUST00000065785 Igkv20-101-2A0A0G2JDU3 113 aa12.05□□□□□ -0.48
Trim50-201ENSMUST00000065785 Vmn1r1E9PVR6 306 aa12.05□□□□□ -0.48
Trim50-201ENSMUST00000065785 Fhl1P97447 280 aaKnown RBP12.05□□□□□ -0.48
Trim50-201ENSMUST00000065785 Uqcc3Q8K2T4 89 aa12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 62.3 ms