Protein–RNA interactions for Protein: E9PVR6

Vmn1r1, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r1E9PVR6 Gm25239-201ENSMUST00000174915 86 ntBASIC26.49■■□□□ 1.83
Vmn1r1E9PVR6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Vmn1r1E9PVR6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Vmn1r1E9PVR6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Vmn1r1E9PVR6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Vmn1r1E9PVR6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Vmn1r1E9PVR6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Vmn1r1E9PVR6 Psd-208ENSMUST00000224556 2034 ntBASIC24.06■■□□□ 1.44
Vmn1r1E9PVR6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Vmn1r1E9PVR6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vmn1r1E9PVR6 Gm15042-201ENSMUST00000120212 883 ntBASIC23.7■■□□□ 1.38
Vmn1r1E9PVR6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Vmn1r1E9PVR6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Vmn1r1E9PVR6 Gm15045-201ENSMUST00000117359 883 ntBASIC23.25■■□□□ 1.31
Vmn1r1E9PVR6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.2■■□□□ 1.3
Vmn1r1E9PVR6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vmn1r1E9PVR6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Vmn1r1E9PVR6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Vmn1r1E9PVR6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vmn1r1E9PVR6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Vmn1r1E9PVR6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vmn1r1E9PVR6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vmn1r1E9PVR6 Gm24109-201ENSMUST00000175489 103 ntBASIC22.68■■□□□ 1.22
Vmn1r1E9PVR6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Vmn1r1E9PVR6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Vmn1r1E9PVR6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Vmn1r1E9PVR6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vmn1r1E9PVR6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Vmn1r1E9PVR6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Vmn1r1E9PVR6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Vmn1r1E9PVR6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.49■■□□□ 1.19
Vmn1r1E9PVR6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Vmn1r1E9PVR6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r1E9PVR6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.35■■□□□ 1.17
Vmn1r1E9PVR6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r1E9PVR6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r1E9PVR6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r1E9PVR6 Gm23366-201ENSMUST00000175022 89 ntBASIC22.2■■□□□ 1.14
Vmn1r1E9PVR6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r1E9PVR6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r1E9PVR6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vmn1r1E9PVR6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vmn1r1E9PVR6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.05■■□□□ 1.12
Vmn1r1E9PVR6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Vmn1r1E9PVR6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Vmn1r1E9PVR6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.94■■□□□ 1.1
Vmn1r1E9PVR6 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.93■■□□□ 1.1
Vmn1r1E9PVR6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Vmn1r1E9PVR6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Vmn1r1E9PVR6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vmn1r1E9PVR6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vmn1r1E9PVR6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vmn1r1E9PVR6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Vmn1r1E9PVR6 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.81■■□□□ 1.08
Vmn1r1E9PVR6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.81■■□□□ 1.08
Vmn1r1E9PVR6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Vmn1r1E9PVR6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.8■■□□□ 1.08
Vmn1r1E9PVR6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Vmn1r1E9PVR6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vmn1r1E9PVR6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vmn1r1E9PVR6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vmn1r1E9PVR6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vmn1r1E9PVR6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vmn1r1E9PVR6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vmn1r1E9PVR6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.4■■□□□ 1.02
Vmn1r1E9PVR6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r1E9PVR6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vmn1r1E9PVR6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Vmn1r1E9PVR6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Vmn1r1E9PVR6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Vmn1r1E9PVR6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vmn1r1E9PVR6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r1E9PVR6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vmn1r1E9PVR6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vmn1r1E9PVR6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Vmn1r1E9PVR6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Vmn1r1E9PVR6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Vmn1r1E9PVR6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Vmn1r1E9PVR6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vmn1r1E9PVR6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vmn1r1E9PVR6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Vmn1r1E9PVR6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vmn1r1E9PVR6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.98■□□□□ 0.95
Vmn1r1E9PVR6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.97■□□□□ 0.95
Vmn1r1E9PVR6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vmn1r1E9PVR6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Vmn1r1E9PVR6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vmn1r1E9PVR6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Vmn1r1E9PVR6 Gm27325-201ENSMUST00000175467 74 ntBASIC20.86■□□□□ 0.93
Vmn1r1E9PVR6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vmn1r1E9PVR6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vmn1r1E9PVR6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vmn1r1E9PVR6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vmn1r1E9PVR6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vmn1r1E9PVR6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vmn1r1E9PVR6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vmn1r1E9PVR6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Vmn1r1E9PVR6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Vmn1r1E9PVR6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Vmn1r1E9PVR6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms