RNA–Protein interactions for RNA: ENSMUST00000032168.6

Sec61a1-201, Transcript of Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sec61a1, Length 3,172 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1-201ENSMUST00000032168 Mrpl53Q9D1H8 118 aaKnown RBP12.89□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Zfp109A0A0U1RPC5 652 aa12.89□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 DdtO35215 118 aa12.89□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 AW146154Q3TPQ7 468 aa12.89□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 9130213A22RikQ3V3T2 120 aa12.89□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 TdhQ8K3F7 373 aa12.89□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Gm10188Q3V432 135 aa12.89□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ramp1Q9WTJ5 148 aa12.89□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Tstd1E9PY03 133 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Gm5426J3QNM7 103 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Sprr3O09116 238 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Lrcol1Q3URS3 161 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Gm9913Q8BQQ2 135 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Tppp3Q9CRB6 176 aaKnown RBP12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Col7a1Q63870 2944 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Tcrg-V6A0A075B5Y8 134 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Adam8Q05910 826 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Olfr1209Q3SXJ3 310 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Mbd3l2Q3UXB0 228 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ang5Q5GAN1 145 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Olfr761Q7TRJ0 323 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Spock3Q8BKV0 436 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ufc1Q9CR09 167 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Tomm40Q9QYA2 361 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Obox8V9GWY9 217 aa12.88□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ighv1-80A0A075B5Y3 117 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Gm28051J3QMA2 81 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ighv1-62-3P01754 117 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ormdl3Q9CPZ6 153 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Igkv4-57-1A0A075B5M4 119 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ighv1-53A0A075B5W3 117 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ighv8-6A0A0A6YXA3 118 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Sub1P11031 127 aaKnown RBP12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Fhl1P97447 280 aaKnown RBP12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Bsph1Q3UW26 133 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Q4KKZ1 196 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Vmn1r202Q8R259 302 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Fam241bQ9D882 120 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 P01736 120 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Olfr1012Q8VFJ7 311 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Q9D131 166 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Klf13Q9JJZ6 289 aa12.87□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Prrc2aQ7TSC1 2158 aaKnown RBP12.86□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Tmem241Q3UME2 297 aa12.86□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Rchy1Q9CR50 261 aa12.86□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Gm5157A0A087WRH8 301 aa12.86□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Esp38A8R0X1 80 aa12.86□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Tcte2E9PY37 120 aa12.86□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Gm6040Q4QY32 63 aa12.86□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Olfr1431Q8VF59 312 aa12.86□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Arhgap32Q811P8 2089 aa12.86□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Omt2bD3YX29 119 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ccl21aP84444 133 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ccl21bP86792 133 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ccl21cP86793 133 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Gm9961Q8BNV2 113 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 AhspQ9CY02 102 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 BC067074F6RXI4 2391 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Igkv20-101-2A0A0G2JDU3 113 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Gm21994F6T2D2 329 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ang6Q5GAN0 147 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Ube2cQ9D1C1 179 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Gm17455G3UW87 128 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Zfp248Q640N4 576 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Vsig8Q6P3A4 417 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Olfr365Q8VFT2 312 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Q9D7E4 109 aa12.85□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Chd9Q8BYH8 2885 aa12.84□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Fam213bQ9DB60 201 aa12.84□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 TrrapQ80YV3 2565 aaKnown RBP12.84□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 CubnQ9JLB4 3623 aa12.84□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Tcrg-V4A0A0B4J1J8 138 aa12.83□□□□□ -0.35
Sec61a1-201ENSMUST00000032168 Tmem262D3Z338 116 aa12.83□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Olfr869E9PX82 323 aa12.83□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Rnf24Q8BGI1 148 aa12.83□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Uqcc3Q8K2T4 89 aa12.83□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Dpm3Q9D1Q4 92 aa12.83□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Ighv3-8A0A075B5T0 131 aa12.83□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Ighv1-22A0A075B5U7 117 aa12.83□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Trav7-5A0A0G2JFX6 112 aa12.83□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Gm1968Q3T9I3 115 aa12.83□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Hyls1Q9CXX0 307 aa12.83□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Gm15294V9GXA7 121 aa12.83□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Foxc2Q61850 494 aa12.82□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 D630044L22RikQ8C701 164 aa12.82□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 P01727 129 aa12.82□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Odf1Q61999 247 aa12.82□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Olfr1402Q8VET1 320 aa12.82□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Tctex1d1Q9D5I4 173 aa12.82□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Hivep2Q3UHF7 2430 aa12.82□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Olfr1245A0A1L1SQJ6 307 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Gm10553J3QPF1 123 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 4930474N05RikQ8BVR5 218 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Pdzd2E9Q1M1 2796 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Trav6-4A0A075B6B4 115 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Gm5878E9PUB3 99 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Gm6904E9PVF1 202 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Itgb1bp1O35671 200 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Defa-rs1P17533 116 aa12.81□□□□□ -0.36
Sec61a1-201ENSMUST00000032168 Rbfox3Q8BIF2 374 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 67 ms