Protein–RNA interactions for Protein: Q9CR09

Ufc1, Ubiquitin-fold modifier-conjugating enzyme 1, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufc1Q9CR09 Gm25239-201ENSMUST00000174915 86 ntBASIC28.2■■■□□ 2.1
Ufc1Q9CR09 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Ufc1Q9CR09 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ufc1Q9CR09 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ufc1Q9CR09 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ufc1Q9CR09 Gm15042-201ENSMUST00000120212 883 ntBASIC25.02■■□□□ 1.6
Ufc1Q9CR09 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Ufc1Q9CR09 Gm15045-201ENSMUST00000117359 883 ntBASIC24.44■■□□□ 1.5
Ufc1Q9CR09 Gm24109-201ENSMUST00000175489 103 ntBASIC24.22■■□□□ 1.47
Ufc1Q9CR09 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ufc1Q9CR09 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ufc1Q9CR09 Psd-208ENSMUST00000224556 2034 ntBASIC23.98■■□□□ 1.43
Ufc1Q9CR09 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ufc1Q9CR09 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.79■■□□□ 1.4
Ufc1Q9CR09 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ufc1Q9CR09 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ufc1Q9CR09 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ufc1Q9CR09 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ufc1Q9CR09 Gm23366-201ENSMUST00000175022 89 ntBASIC23.66■■□□□ 1.38
Ufc1Q9CR09 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ufc1Q9CR09 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ufc1Q9CR09 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ufc1Q9CR09 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ufc1Q9CR09 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ufc1Q9CR09 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ufc1Q9CR09 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ufc1Q9CR09 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ufc1Q9CR09 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ufc1Q9CR09 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.2■■□□□ 1.3
Ufc1Q9CR09 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ufc1Q9CR09 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ufc1Q9CR09 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Ufc1Q9CR09 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.96■■□□□ 1.27
Ufc1Q9CR09 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.96■■□□□ 1.27
Ufc1Q9CR09 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ufc1Q9CR09 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ufc1Q9CR09 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Ufc1Q9CR09 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ufc1Q9CR09 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.59■■□□□ 1.21
Ufc1Q9CR09 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ufc1Q9CR09 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ufc1Q9CR09 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ufc1Q9CR09 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ufc1Q9CR09 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.39■■□□□ 1.17
Ufc1Q9CR09 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ufc1Q9CR09 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ufc1Q9CR09 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ufc1Q9CR09 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Ufc1Q9CR09 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.24■■□□□ 1.15
Ufc1Q9CR09 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.23■■□□□ 1.15
Ufc1Q9CR09 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Ufc1Q9CR09 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ufc1Q9CR09 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ufc1Q9CR09 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.17■■□□□ 1.14
Ufc1Q9CR09 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ufc1Q9CR09 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ufc1Q9CR09 Gm25238-201ENSMUST00000174914 89 ntBASIC22.1■■□□□ 1.13
Ufc1Q9CR09 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ufc1Q9CR09 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ufc1Q9CR09 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ufc1Q9CR09 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Ufc1Q9CR09 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Ufc1Q9CR09 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ufc1Q9CR09 Gm27325-201ENSMUST00000175467 74 ntBASIC21.96■■□□□ 1.11
Ufc1Q9CR09 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ufc1Q9CR09 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.89■■□□□ 1.09
Ufc1Q9CR09 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.88■■□□□ 1.09
Ufc1Q9CR09 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Ufc1Q9CR09 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Ufc1Q9CR09 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.82■■□□□ 1.08
Ufc1Q9CR09 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
Ufc1Q9CR09 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ufc1Q9CR09 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ufc1Q9CR09 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
Ufc1Q9CR09 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ufc1Q9CR09 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ufc1Q9CR09 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ufc1Q9CR09 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ufc1Q9CR09 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ufc1Q9CR09 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.66■■□□□ 1.06
Ufc1Q9CR09 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ufc1Q9CR09 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ufc1Q9CR09 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.61■■□□□ 1.05
Ufc1Q9CR09 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.59■■□□□ 1.05
Ufc1Q9CR09 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ufc1Q9CR09 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ufc1Q9CR09 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.52■■□□□ 1.04
Ufc1Q9CR09 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ufc1Q9CR09 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ufc1Q9CR09 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ufc1Q9CR09 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ufc1Q9CR09 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.45■■□□□ 1.02
Ufc1Q9CR09 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ufc1Q9CR09 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ufc1Q9CR09 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Ufc1Q9CR09 Rab21-202ENSMUST00000218831 843 ntBASIC21.38■■□□□ 1.01
Ufc1Q9CR09 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ufc1Q9CR09 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ufc1Q9CR09 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ufc1Q9CR09 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms