RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Obp2bA2BHR0 176 aa12.71□□□□□ -0.38
Trim28-201ENSMUST00000005705 CrxO54751 299 aa12.71□□□□□ -0.38
Trim28-201ENSMUST00000005705 Gm17727E9Q4V7 109 aa12.7□□□□□ -0.38
Trim28-201ENSMUST00000005705 P04943 107 aa12.7□□□□□ -0.38
Trim28-201ENSMUST00000005705 Ccl12Q62401 104 aa12.7□□□□□ -0.38
Trim28-201ENSMUST00000005705 Rasl11aQ6IMB1 242 aa12.7□□□□□ -0.38
Trim28-201ENSMUST00000005705 9230109A22RikQ8BHE6 111 aa12.7□□□□□ -0.38
Trim28-201ENSMUST00000005705 LtaP09225 202 aa12.7□□□□□ -0.38
Trim28-201ENSMUST00000005705 Olfr498Q8VEW2 330 aa12.7□□□□□ -0.38
Trim28-201ENSMUST00000005705 Rchy1Q9CR50 261 aa12.7□□□□□ -0.38
Trim28-201ENSMUST00000005705 Nit2Q9JHW2 276 aa12.7□□□□□ -0.38
Trim28-201ENSMUST00000005705 P0C913 63 aa12.69□□□□□ -0.38
Trim28-201ENSMUST00000005705 Vmn1r197Q8R265 298 aa12.69□□□□□ -0.38
Trim28-201ENSMUST00000005705 Dnajb12Q9QYI4 376 aaKnown RBP12.69□□□□□ -0.38
Trim28-201ENSMUST00000005705 Ighv14-3A0A075B5R9 117 aa12.69□□□□□ -0.38
Trim28-201ENSMUST00000005705 Prrx2Q06348 247 aa12.69□□□□□ -0.38
Trim28-201ENSMUST00000005705 Vmn1r62Q8R2C0 300 aa12.69□□□□□ -0.38
Trim28-201ENSMUST00000005705 Ubtd1Q91WB7 227 aa12.69□□□□□ -0.38
Trim28-201ENSMUST00000005705 Ifitm2Q99J93 144 aa12.69□□□□□ -0.38
Trim28-201ENSMUST00000005705 Rpl11Q9CXW4 178 aaKnown RBP12.69□□□□□ -0.38
Trim28-201ENSMUST00000005705 Gm9958Q8C9U4 106 aa12.69□□□□□ -0.38
Trim28-201ENSMUST00000005705 Gnb1lQ9EQ15 326 aa12.69□□□□□ -0.38
Trim28-201ENSMUST00000005705 Trav6d-7A0A075B6B0 112 aa12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 Q3UNZ8 350 aa12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 Olfr365Q8VFT2 312 aa12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 Atp6v0bQ91V37 205 aa12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 Vmn1r63Q9EPT1 300 aa12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 Prrc2aQ7TSC1 2158 aaKnown RBP12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 Ighv1-55A0A075B5W6 117 aa12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 Ighv1-31A0A0A6YWK5 117 aa12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 Trav7-5A0A0G2JFX6 112 aa12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 Dlx6P70397 175 aa12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 Cml3Q9JIY8 226 aa12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 Arhgap32Q811P8 2089 aa12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 BC067074F6RXI4 2391 aa12.68□□□□□ -0.38
Trim28-201ENSMUST00000005705 Gm10192Q3V0S1 108 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 PdpnQ62011 172 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Dmrtc2Q8CGW9 370 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 RpeQ8VEE0 228 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Mrpl33Q9CQP0 65 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Mrpl53Q9D1H8 118 aaKnown RBP12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Nf1Q04690 2841 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Gm15217A2CG07 155 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Slc25a16Q8C0K5 332 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Ube2tQ9CQ37 204 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Nxph4G3X9N5 304 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Htr1dQ61224 374 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Muc15Q8C6Z1 331 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Olfr981Q8VEU2 310 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Q9D131 166 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Bex1Q9R224 128 aa12.67□□□□□ -0.38
Trim28-201ENSMUST00000005705 Rps20P60867 119 aaKnown RBP12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 Aqp6Q8C4A0 293 aa12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 Wfdc2Q9DAU7 174 aa12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 Erg28Q9ERY9 140 aa12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 Trav21-dv12A0A075B6C4 109 aa12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 Tmem141A2AJB2 108 aa12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 HampQ9EQ21 83 aa12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 Gm28269A0A087WSG3 125 aa12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 Trav14n-2A0A0G2JDF5 121 aa12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 Tmem116A0A0G2JGD3 401 aa12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 Dnajc30P59041 219 aa12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 Tmem129Q8K304 362 aa12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 Olfr873Q8VFJ0 319 aa12.66□□□□□ -0.38
Trim28-201ENSMUST00000005705 Trav16nA0A075B634 117 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Gm28778A0A087WSK7 233 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Smad7O35253 426 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Defa24Q5G865 93 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Olfr745Q7TRL9 328 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Slc25a20Q9Z2Z6 301 aaKnown RBP12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Hivep3A2A884 2348 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Gm29289A0A087WPY7 166 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Gm4064A0A087WR82 380 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Shisal2aA2A9G7 189 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Igsf23B2RTN2 239 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Gm10352B2RWR6 380 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Olfr235E9Q9Z6 312 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Gm21693J3QK27 380 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Rbmy1a1O35698 380 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 P01724 129 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 P01727 129 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Gm10604Q3V0X7 143 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 D630044L22RikQ8C701 164 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Obp2aQ8K1H9 176 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Ly6g5bQ8K1T4 194 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Tomm6Q9CQN3 74 aa12.65□□□□□ -0.38
Trim28-201ENSMUST00000005705 Mzt1Q8BUR9 78 aa12.64□□□□□ -0.39
Trim28-201ENSMUST00000005705 Stpg1Q9D2F5 341 aa12.64□□□□□ -0.39
Trim28-201ENSMUST00000005705 Ighv14-2A0A075B5R7 117 aa12.64□□□□□ -0.39
Trim28-201ENSMUST00000005705 A730046J19RikA0A1B0GSN8 89 aa12.64□□□□□ -0.39
Trim28-201ENSMUST00000005705 P0C1Z5 52 aa12.64□□□□□ -0.39
Trim28-201ENSMUST00000005705 Cox8bP48772 70 aa12.64□□□□□ -0.39
Trim28-201ENSMUST00000005705 Taf15Q8BQ46 557 aaKnown RBP12.64□□□□□ -0.39
Trim28-201ENSMUST00000005705 B430305J03RikQ8BQQ8 176 aa12.64□□□□□ -0.39
Trim28-201ENSMUST00000005705 Cnn3Q9DAW9 330 aaKnown RBP12.64□□□□□ -0.39
Trim28-201ENSMUST00000005705 Hspb8Q9JK92 196 aa12.64□□□□□ -0.39
Trim28-201ENSMUST00000005705 Sec11aQ9R0P6 179 aa12.64□□□□□ -0.39
Trim28-201ENSMUST00000005705 Gm17660B9UIU9 90 aa12.63□□□□□ -0.39
Trim28-201ENSMUST00000005705 Gm12888Q3UW77 119 aa12.63□□□□□ -0.39
Trim28-201ENSMUST00000005705 8030423J24RikQ9CX45 142 aa12.63□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 70.6 ms