RNA–Protein interactions for RNA: ENST00000637886.1

UBE3A-226, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,725 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-226ENST00000637886 TRIOO75962 3097 aa7.1□□□□□ -1.27
UBE3A-226ENST00000637886 A6NN06 94 aa7.07□□□□□ -1.28
UBE3A-226ENST00000637886 KRTAP21-3Q3LHN1 58 aa7.06□□□□□ -1.28
UBE3A-226ENST00000637886 ITPR1Q14643 2758 aa7.06□□□□□ -1.28
UBE3A-226ENST00000637886 FRYLO94915 3013 aa7.05□□□□□ -1.28
UBE3A-226ENST00000637886 KRTAP11-1Q8IUC1 163 aa7.04□□□□□ -1.28
UBE3A-226ENST00000637886 HTTP42858 3142 aa7.04□□□□□ -1.28
UBE3A-226ENST00000637886 MYO15AQ9UKN7 3530 aa7.03□□□□□ -1.28
UBE3A-226ENST00000637886 KRTAP13-2Q52LG2 175 aa7.02□□□□□ -1.29
UBE3A-226ENST00000637886 VPS13AQ96RL7 3174 aa7□□□□□ -1.29
UBE3A-226ENST00000637886 TNRC18O15417 2968 aaPredicted RBP6.98□□□□□ -1.29
UBE3A-226ENST00000637886 NF1P21359 2839 aa6.98□□□□□ -1.29
UBE3A-226ENST00000637886 SPTBN5Q9NRC6 3674 aaKnown RBP6.98□□□□□ -1.29
UBE3A-226ENST00000637886 CHD9Q3L8U1 2897 aa6.97□□□□□ -1.29
UBE3A-226ENST00000637886 ASPMQ8IZT6 3477 aa6.96□□□□□ -1.3
UBE3A-226ENST00000637886 TPRXLQ17RH7 258 aa6.95□□□□□ -1.3
UBE3A-226ENST00000637886 HIVEP1P15822 2718 aa6.95□□□□□ -1.3
UBE3A-226ENST00000637886 ASH1LQ9NR48 2969 aaKnown RBP6.95□□□□□ -1.3
UBE3A-226ENST00000637886 LRBAP50851 2863 aa6.94□□□□□ -1.3
UBE3A-226ENST00000637886 XP32Q5T750 250 aa6.92□□□□□ -1.3
UBE3A-226ENST00000637886 KALRNO60229 2985 aa6.92□□□□□ -1.3
UBE3A-226ENST00000637886 USP34Q70CQ2 3546 aa6.91□□□□□ -1.3
UBE3A-226ENST00000637886 COL12A1Q99715 3063 aa6.91□□□□□ -1.3
UBE3A-226ENST00000637886 CFAP47Q6ZTR5 3102 aa6.89□□□□□ -1.31
UBE3A-226ENST00000637886 COL6A3P12111 3177 aa6.88□□□□□ -1.31
UBE3A-226ENST00000637886 DMXL2Q8TDJ6 3036 aa6.86□□□□□ -1.31
UBE3A-226ENST00000637886 LAMA1P25391 3075 aa6.85□□□□□ -1.31
UBE3A-226ENST00000637886 CHD7Q9P2D1 2997 aa6.85□□□□□ -1.31
UBE3A-226ENST00000637886 KRTAP13-1Q8IUC0 172 aa6.84□□□□□ -1.31
UBE3A-226ENST00000637886 WDFY3Q8IZQ1 3526 aa6.83□□□□□ -1.32
UBE3A-226ENST00000637886 PDZD2O15018 2839 aa6.78□□□□□ -1.32
UBE3A-226ENST00000637886 CELSR2Q9HCU4 2923 aa6.77□□□□□ -1.33
UBE3A-226ENST00000637886 NIPBLQ6KC79 2804 aaeCLIP6.76□□□□□ -1.338e-8■■■■■ 41.9
UBE3A-226ENST00000637886 TGP01266 2768 aa6.73□□□□□ -1.33
UBE3A-226ENST00000637886 TENM4Q6N022 2769 aa6.73□□□□□ -1.33
UBE3A-226ENST00000637886 ZZEF1O43149 2961 aa6.7□□□□□ -1.34
UBE3A-226ENST00000637886 H0YAA0 97 aa6.68□□□□□ -1.34
UBE3A-226ENST00000637886 KRTAP7-1Q8IUC3 87 aa6.64□□□□□ -1.35
UBE3A-226ENST00000637886 BOD1L1Q8NFC6 3051 aa6.62□□□□□ -1.35
UBE3A-226ENST00000637886 LOC400499M0QZD8 3231 aa6.62□□□□□ -1.35
UBE3A-226ENST00000637886 CELSR1Q9NYQ6 3014 aa6.61□□□□□ -1.35
UBE3A-226ENST00000637886 DCHS1Q96JQ0 3298 aa6.61□□□□□ -1.35
UBE3A-226ENST00000637886 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
UBE3A-226ENST00000637886 EYSQ5T1H1 3165 aa6.6□□□□□ -1.35
UBE3A-226ENST00000637886 ATMQ13315 3056 aa6.59□□□□□ -1.35
UBE3A-226ENST00000637886 VWFP04275 2813 aa6.58□□□□□ -1.36
UBE3A-226ENST00000637886 KRTAP13-3Q3SY46 172 aa6.58□□□□□ -1.36
UBE3A-226ENST00000637886 LAMA5O15230 3695 aa6.57□□□□□ -1.36
UBE3A-226ENST00000637886 DCHS2Q6V1P9 2916 aa6.56□□□□□ -1.36
UBE3A-226ENST00000637886 PKD1L1Q8TDX9 2849 aa6.56□□□□□ -1.36
UBE3A-226ENST00000637886 TACC2O95359 2948 aa6.56□□□□□ -1.36
UBE3A-226ENST00000637886 ZANQ9Y493 2812 aa6.55□□□□□ -1.36
UBE3A-226ENST00000637886 ADGRG4Q8IZF6 3080 aa6.54□□□□□ -1.36
UBE3A-226ENST00000637886 KRTAP1-4P0C5Y4 121 aa6.54□□□□□ -1.36
UBE3A-226ENST00000637886 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
UBE3A-226ENST00000637886 NBPF19A0A087WUL8 3843 aa6.51□□□□□ -1.37
UBE3A-226ENST00000637886 RELNP78509 3460 aa6.48□□□□□ -1.37
UBE3A-226ENST00000637886 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
UBE3A-226ENST00000637886 NBEAQ8NFP9 2946 aa6.48□□□□□ -1.37
UBE3A-226ENST00000637886 TENM2Q9NT68 2774 aa6.46□□□□□ -1.37
UBE3A-226ENST00000637886 ZFHX4Q86UP3 3567 aa6.44□□□□□ -1.38
UBE3A-226ENST00000637886 DMXL1Q9Y485 3027 aa6.33□□□□□ -1.4
UBE3A-226ENST00000637886 SRRM2Q9UQ35 2752 aaKnown RBP6.29□□□□□ -1.4
UBE3A-226ENST00000637886 COL7A1Q02388 2944 aa6.28□□□□□ -1.4
UBE3A-226ENST00000637886 CRCT1Q9UGL9 99 aa6.27□□□□□ -1.41
UBE3A-226ENST00000637886 INE1O15225 51 aa6.25□□□□□ -1.41
UBE3A-226ENST00000637886 FBN2P35556 2912 aa6.24□□□□□ -1.41
UBE3A-226ENST00000637886 SPENQ96T58 3664 aaKnown RBP6.24□□□□□ -1.41
UBE3A-226ENST00000637886 CSMD1Q96PZ7 3565 aa6.21□□□□□ -1.42
UBE3A-226ENST00000637886 MEGF8Q7Z7M0 2845 aa6.19□□□□□ -1.42
UBE3A-226ENST00000637886 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
UBE3A-226ENST00000637886 MXRA5Q9NR99 2828 aa6.14□□□□□ -1.43
UBE3A-226ENST00000637886 ZFHX3Q15911 3703 aa6.14□□□□□ -1.43
UBE3A-226ENST00000637886 CUBNO60494 3623 aa6.11□□□□□ -1.43
UBE3A-226ENST00000637886 KRTAP10-12P60413 245 aa6.09□□□□□ -1.43
UBE3A-226ENST00000637886 CSMD2Q7Z408 3487 aa6.06□□□□□ -1.44
UBE3A-226ENST00000637886 SMG1Q96Q15 3661 aaKnown RBP6.05□□□□□ -1.44
UBE3A-226ENST00000637886 KRTAP10-6P60371 365 aaPredicted RBP6.04□□□□□ -1.44
UBE3A-226ENST00000637886 DMDP11532 3685 aa5.96□□□□□ -1.46
UBE3A-226ENST00000637886 FBN3Q75N90 2809 aa5.95□□□□□ -1.46
UBE3A-226ENST00000637886 HRNRQ86YZ3 2850 aaPredicted RBP5.94□□□□□ -1.46
UBE3A-226ENST00000637886 MUC3AQ02505 3323 aa5.88□□□□□ -1.47
UBE3A-226ENST00000637886 SVEP1Q4LDE5 3571 aa5.79□□□□□ -1.48
UBE3A-226ENST00000637886 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
UBE3A-226ENST00000637886 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
UBE3A-226ENST00000637886 KRTAP8-1Q8IUC2 63 aa5.76□□□□□ -1.49
UBE3A-226ENST00000637886 KRTAP3-1Q9BYR8 98 aa5.65□□□□□ -1.5
UBE3A-226ENST00000637886 LORP23490 312 aaPredicted RBP5.64□□□□□ -1.51
UBE3A-226ENST00000637886 FBN1P35555 2871 aaKnown RBP5.64□□□□□ -1.51
UBE3A-226ENST00000637886 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
UBE3A-226ENST00000637886 OTOGQ6ZRI0 2925 aa5.6□□□□□ -1.51
UBE3A-226ENST00000637886 TRRAPQ9Y4A5 3859 aa5.59□□□□□ -1.51
UBE3A-226ENST00000637886 CSMD3Q7Z407 3707 aa5.58□□□□□ -1.52
UBE3A-226ENST00000637886 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
UBE3A-226ENST00000637886 VPS13CQ709C8 3753 aa5.52□□□□□ -1.53
UBE3A-226ENST00000637886 KRTAP10-7P60409 375 aaPredicted RBP5.48□□□□□ -1.53
UBE3A-226ENST00000637886 AKAP9Q99996 3911 aa5.42□□□□□ -1.54
UBE3A-226ENST00000637886 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
UBE3A-226ENST00000637886 BSNQ9UPA5 3926 aa5.38□□□□□ -1.55
UBE3A-226ENST00000637886 ALMS1Q8TCU4 4167 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms