RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 CFAP47Q6ZTR5 3102 aa9.68□□□□□ -0.86
CACNA1A-225ENST00000636389 COL6A3P12111 3177 aa9.64□□□□□ -0.87
CACNA1A-225ENST00000636389 CDH23Q9H251 3354 aa9.64□□□□□ -0.87
CACNA1A-225ENST00000636389 LRBAP50851 2863 aa9.62□□□□□ -0.87
CACNA1A-225ENST00000636389 VCANP13611 3396 aa9.61□□□□□ -0.87
CACNA1A-225ENST00000636389 DMXL2Q8TDJ6 3036 aa9.61□□□□□ -0.87
CACNA1A-225ENST00000636389 COL12A1Q99715 3063 aa9.61□□□□□ -0.87
CACNA1A-225ENST00000636389 PRO2289Q9P1D8 64 aa9.6□□□□□ -0.87
CACNA1A-225ENST00000636389 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
CACNA1A-225ENST00000636389 KRTAP13-2Q52LG2 175 aa9.6□□□□□ -0.87
CACNA1A-225ENST00000636389 PP632Q6XCG6 107 aa9.6□□□□□ -0.87
CACNA1A-225ENST00000636389 KRTAP10-10P60014 251 aa9.58□□□□□ -0.88
CACNA1A-225ENST00000636389 LAMA1P25391 3075 aa9.57□□□□□ -0.88
CACNA1A-225ENST00000636389 USP34Q70CQ2 3546 aa9.57□□□□□ -0.88
CACNA1A-225ENST00000636389 SZT2Q5T011 3432 aa9.57□□□□□ -0.88
CACNA1A-225ENST00000636389 ATMQ13315 3056 aa9.44□□□□□ -0.9
CACNA1A-225ENST00000636389 FLNCQ14315 2725 aa9.4□□□□□ -0.9
CACNA1A-225ENST00000636389 TENM1Q9UKZ4 2725 aa9.4□□□□□ -0.9
CACNA1A-225ENST00000636389 HIVEP1P15822 2718 aa9.39□□□□□ -0.91
CACNA1A-225ENST00000636389 ZZEF1O43149 2961 aa9.39□□□□□ -0.91
CACNA1A-225ENST00000636389 CHD9Q3L8U1 2897 aa9.39□□□□□ -0.91
CACNA1A-225ENST00000636389 BOD1L1Q8NFC6 3051 aa9.36□□□□□ -0.91
CACNA1A-225ENST00000636389 CELSR2Q9HCU4 2923 aa9.33□□□□□ -0.92
CACNA1A-225ENST00000636389 XP32Q5T750 250 aa9.32□□□□□ -0.92
CACNA1A-225ENST00000636389 NF1P21359 2839 aa9.31□□□□□ -0.92
CACNA1A-225ENST00000636389 KRTAP7-1Q8IUC3 87 aa9.31□□□□□ -0.92
CACNA1A-225ENST00000636389 KRTAP13-1Q8IUC0 172 aa9.27□□□□□ -0.93
CACNA1A-225ENST00000636389 ASPMQ8IZT6 3477 aa9.25□□□□□ -0.93
CACNA1A-225ENST00000636389 TACC2O95359 2948 aa9.24□□□□□ -0.93
CACNA1A-225ENST00000636389 H0YAA0 97 aa9.21□□□□□ -0.93
CACNA1A-225ENST00000636389 ADGRG4Q8IZF6 3080 aa9.21□□□□□ -0.93
CACNA1A-225ENST00000636389 TENM3Q9P273 2699 aa9.21□□□□□ -0.93
CACNA1A-225ENST00000636389 SPTBN5Q9NRC6 3674 aaKnown RBP9.2□□□□□ -0.94
CACNA1A-225ENST00000636389 NIPBLQ6KC79 2804 aaeCLIP9.18□□□□□ -0.94
CACNA1A-225ENST00000636389 NBPF19A0A087WUL8 3843 aa9.17□□□□□ -0.94
CACNA1A-225ENST00000636389 WDFY3Q8IZQ1 3526 aa9.16□□□□□ -0.94
CACNA1A-225ENST00000636389 ZFHX4Q86UP3 3567 aa9.16□□□□□ -0.94
CACNA1A-225ENST00000636389 NBEAQ8NFP9 2946 aa9.13□□□□□ -0.95
CACNA1A-225ENST00000636389 TNRC18O15417 2968 aaPredicted RBP9.13□□□□□ -0.95
CACNA1A-225ENST00000636389 MYO15AQ9UKN7 3530 aa9.1□□□□□ -0.95
CACNA1A-225ENST00000636389 CELSR1Q9NYQ6 3014 aa9.1□□□□□ -0.95
CACNA1A-225ENST00000636389 TPRXLQ17RH7 258 aa9.1□□□□□ -0.95
CACNA1A-225ENST00000636389 LOC400499M0QZD8 3231 aa9.08□□□□□ -0.96
CACNA1A-225ENST00000636389 DCHS2Q6V1P9 2916 aa9.08□□□□□ -0.96
CACNA1A-225ENST00000636389 DMXL1Q9Y485 3027 aa9.06□□□□□ -0.96
CACNA1A-225ENST00000636389 TGP01266 2768 aa9.02□□□□□ -0.97
CACNA1A-225ENST00000636389 TENM4Q6N022 2769 aa9.01□□□□□ -0.97
CACNA1A-225ENST00000636389 KRTAP21-3Q3LHN1 58 aa8.97□□□□□ -0.97
CACNA1A-225ENST00000636389 DCHS1Q96JQ0 3298 aa8.95□□□□□ -0.98
CACNA1A-225ENST00000636389 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
CACNA1A-225ENST00000636389 LAMA5O15230 3695 aa8.94□□□□□ -0.98
CACNA1A-225ENST00000636389 PDZD2O15018 2839 aa8.93□□□□□ -0.98
CACNA1A-225ENST00000636389 EYSQ5T1H1 3165 aa8.92□□□□□ -0.98
CACNA1A-225ENST00000636389 KRTAP1-4P0C5Y4 121 aa8.89□□□□□ -0.99
CACNA1A-225ENST00000636389 ZANQ9Y493 2812 aa8.85□□□□□ -0.99
CACNA1A-225ENST00000636389 FBN2P35556 2912 aa8.82□□□□□ -1
CACNA1A-225ENST00000636389 KRTAP13-3Q3SY46 172 aa8.81□□□□□ -1
CACNA1A-225ENST00000636389 KRTAP15-1Q3LI76 137 aa8.77□□□□□ -1.01
CACNA1A-225ENST00000636389 PKD1L1Q8TDX9 2849 aa8.73□□□□□ -1.01
CACNA1A-225ENST00000636389 VWFP04275 2813 aa8.72□□□□□ -1.01
CACNA1A-225ENST00000636389 SRRM2Q9UQ35 2752 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-225ENST00000636389 CRCT1Q9UGL9 99 aa8.67□□□□□ -1.02
CACNA1A-225ENST00000636389 RELNP78509 3460 aa8.66□□□□□ -1.02
CACNA1A-225ENST00000636389 CSMD1Q96PZ7 3565 aa8.66□□□□□ -1.02
CACNA1A-225ENST00000636389 KRTAP13-4Q3LI77 160 aa8.66□□□□□ -1.02
CACNA1A-225ENST00000636389 SPENQ96T58 3664 aaKnown RBP8.6□□□□□ -1.03
CACNA1A-225ENST00000636389 HRNRQ86YZ3 2850 aaPredicted RBP8.57□□□□□ -1.04
CACNA1A-225ENST00000636389 MXRA5Q9NR99 2828 aa8.56□□□□□ -1.04
CACNA1A-225ENST00000636389 SMG1Q96Q15 3661 aaKnown RBP8.53□□□□□ -1.04
CACNA1A-225ENST00000636389 TENM2Q9NT68 2774 aa8.49□□□□□ -1.05
CACNA1A-225ENST00000636389 ZFHX3Q15911 3703 aa8.48□□□□□ -1.05
CACNA1A-225ENST00000636389 KRTAP12-1P59990 96 aa8.43□□□□□ -1.06
CACNA1A-225ENST00000636389 INE1O15225 51 aa8.39□□□□□ -1.07
CACNA1A-225ENST00000636389 COL7A1Q02388 2944 aa8.38□□□□□ -1.07
CACNA1A-225ENST00000636389 DMDP11532 3685 aa8.34□□□□□ -1.07
CACNA1A-225ENST00000636389 MEGF8Q7Z7M0 2845 aa8.23□□□□□ -1.09
CACNA1A-225ENST00000636389 CUBNO60494 3623 aa8.19□□□□□ -1.1
CACNA1A-225ENST00000636389 KRTAP10-12P60413 245 aa8.12□□□□□ -1.11
CACNA1A-225ENST00000636389 MUC3AQ02505 3323 aa8.06□□□□□ -1.12
CACNA1A-225ENST00000636389 SVEP1Q4LDE5 3571 aa8.06□□□□□ -1.12
CACNA1A-225ENST00000636389 VPS13CQ709C8 3753 aa7.99□□□□□ -1.13
CACNA1A-225ENST00000636389 FBN3Q75N90 2809 aa7.99□□□□□ -1.13
CACNA1A-225ENST00000636389 CSMD3Q7Z407 3707 aa7.95□□□□□ -1.14
CACNA1A-225ENST00000636389 FBN1P35555 2871 aaKnown RBP7.94□□□□□ -1.14
CACNA1A-225ENST00000636389 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
CACNA1A-225ENST00000636389 KRTAP10-6P60371 365 aaPredicted RBP7.9□□□□□ -1.15
CACNA1A-225ENST00000636389 TRRAPQ9Y4A5 3859 aa7.88□□□□□ -1.15
CACNA1A-225ENST00000636389 KRTAP10-5P60370 271 aa7.86□□□□□ -1.15
CACNA1A-225ENST00000636389 OTOGQ6ZRI0 2925 aa7.84□□□□□ -1.15
CACNA1A-225ENST00000636389 CSMD2Q7Z408 3487 aa7.83□□□□□ -1.16
CACNA1A-225ENST00000636389 KRTAP12-3P60328 96 aa7.78□□□□□ -1.16
CACNA1A-225ENST00000636389 LCE3AQ5TA76 89 aa7.65□□□□□ -1.19
CACNA1A-225ENST00000636389 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
CACNA1A-225ENST00000636389 KRTAP8-1Q8IUC2 63 aa7.62□□□□□ -1.19
CACNA1A-225ENST00000636389 AKAP9Q99996 3911 aa7.57□□□□□ -1.2
CACNA1A-225ENST00000636389 BSNQ9UPA5 3926 aa7.49□□□□□ -1.21
CACNA1A-225ENST00000636389 KRTAP23-1A1A580 65 aa7.46□□□□□ -1.21
CACNA1A-225ENST00000636389 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
CACNA1A-225ENST00000636389 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
CACNA1A-225ENST00000636389 KRTAP3-2Q9BYR7 98 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms