RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 NDUFAF8A1L188 74 aa5.11□□□□□ -1.59
PATJ-216ENST00000635214 NBEAL1Q6ZS30 2694 aa5.1□□□□□ -1.59
PATJ-216ENST00000635214 ADM2Q7Z4H4 148 aa5.1□□□□□ -1.59
PATJ-216ENST00000635214 HRNRQ86YZ3 2850 aaPredicted RBP5.1□□□□□ -1.59
PATJ-216ENST00000635214 SPEGQ15772 3267 aa5.09□□□□□ -1.6
PATJ-216ENST00000635214 RPS29P62273 56 aaKnown RBP5.09□□□□□ -1.6
PATJ-216ENST00000635214 CELSR2Q9HCU4 2923 aa5.08□□□□□ -1.6
PATJ-216ENST00000635214 MAP1AP78559 2803 aaPredicted RBP5.08□□□□□ -1.6
PATJ-216ENST00000635214 ANK3Q12955 4377 aaKnown RBP5.08□□□□□ -1.6
PATJ-216ENST00000635214 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
PATJ-216ENST00000635214 DMDP11532 3685 aa5.07□□□□□ -1.6
PATJ-216ENST00000635214 M0R2T5 61 aa5.06□□□□□ -1.6
PATJ-216ENST00000635214 PLAC4Q8WY50 150 aa5.06□□□□□ -1.6
PATJ-216ENST00000635214 CFAP47Q6ZTR5 3102 aa5.06□□□□□ -1.6
PATJ-216ENST00000635214 A8MU10 97 aa5.05□□□□□ -1.6
PATJ-216ENST00000635214 Q6ZRN7 208 aaPredicted RBP5.04□□□□□ -1.6
PATJ-216ENST00000635214 BSNQ9UPA5 3926 aa5.03□□□□□ -1.6
PATJ-216ENST00000635214 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
PATJ-216ENST00000635214 FBN3Q75N90 2809 aa5.02□□□□□ -1.61
PATJ-216ENST00000635214 NOTCH1P46531 2555 aa5.01□□□□□ -1.61
PATJ-216ENST00000635214 BOD1L1Q8NFC6 3051 aa5□□□□□ -1.61
PATJ-216ENST00000635214 LRBAP50851 2863 aa5□□□□□ -1.61
PATJ-216ENST00000635214 KRTAP11-1Q8IUC1 163 aa5□□□□□ -1.61
PATJ-216ENST00000635214 KRTAP13-1Q8IUC0 172 aa4.99□□□□□ -1.61
PATJ-216ENST00000635214 STAB2Q8WWQ8 2551 aa4.99□□□□□ -1.61
PATJ-216ENST00000635214 A8MUU9 505 aa4.98□□□□□ -1.61
PATJ-216ENST00000635214 MXRA5Q9NR99 2828 aa4.98□□□□□ -1.61
PATJ-216ENST00000635214 KRTAP10-1P60331 282 aa4.98□□□□□ -1.61
PATJ-216ENST00000635214 C20orf166-AS1Q96NR2 134 aa4.96□□□□□ -1.62
PATJ-216ENST00000635214 Q5VSD8 79 aa4.95□□□□□ -1.62
PATJ-216ENST00000635214 LOC400499M0QZD8 3231 aa4.95□□□□□ -1.62
PATJ-216ENST00000635214 KRTAP7-1Q8IUC3 87 aa4.95□□□□□ -1.62
PATJ-216ENST00000635214 AKAP9Q99996 3911 aa4.94□□□□□ -1.62
PATJ-216ENST00000635214 KRTAP10-2P60368 255 aa4.94□□□□□ -1.62
PATJ-216ENST00000635214 ZFHX4Q86UP3 3567 aa4.92□□□□□ -1.62
PATJ-216ENST00000635214 A0A1B0GVY2 172 aa4.92□□□□□ -1.62
PATJ-216ENST00000635214 ADGRG4Q8IZF6 3080 aa4.9□□□□□ -1.62
PATJ-216ENST00000635214 NF1P21359 2839 aa4.9□□□□□ -1.62
PATJ-216ENST00000635214 CRYBG3Q68DQ2 2970 aa4.89□□□□□ -1.63
PATJ-216ENST00000635214 NIPBLQ6KC79 2804 aaeCLIP4.89□□□□□ -1.63
PATJ-216ENST00000635214 NBPF19A0A087WUL8 3843 aa4.88□□□□□ -1.63
PATJ-216ENST00000635214 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
PATJ-216ENST00000635214 TNP1P09430 55 aa4.85□□□□□ -1.63
PATJ-216ENST00000635214 DCHS2Q6V1P9 2916 aa4.85□□□□□ -1.63
PATJ-216ENST00000635214 CELSR3Q9NYQ7 3312 aa4.84□□□□□ -1.63
PATJ-216ENST00000635214 ZANQ9Y493 2812 aa4.84□□□□□ -1.63
PATJ-216ENST00000635214 FBN1P35555 2871 aaKnown RBP4.84□□□□□ -1.64
PATJ-216ENST00000635214 LAMA5O15230 3695 aa4.84□□□□□ -1.64
PATJ-216ENST00000635214 TACC2O95359 2948 aa4.82□□□□□ -1.64
PATJ-216ENST00000635214 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
PATJ-216ENST00000635214 SMG1Q96Q15 3661 aaKnown RBP4.82□□□□□ -1.64
PATJ-216ENST00000635214 ALMS1Q8TCU4 4167 aa4.81□□□□□ -1.64
PATJ-216ENST00000635214 KRTAP13-2Q52LG2 175 aa4.81□□□□□ -1.64
PATJ-216ENST00000635214 NBEAL2Q6ZNJ1 2754 aa4.8□□□□□ -1.64
PATJ-216ENST00000635214 ANK2Q01484 3957 aa4.8□□□□□ -1.64
PATJ-216ENST00000635214 P0C880 135 aa4.79□□□□□ -1.64
PATJ-216ENST00000635214 WDFY3Q8IZQ1 3526 aa4.78□□□□□ -1.64
PATJ-216ENST00000635214 ASPMQ8IZT6 3477 aa4.77□□□□□ -1.65
PATJ-216ENST00000635214 RELNP78509 3460 aa4.76□□□□□ -1.65
PATJ-216ENST00000635214 H0YAA0 97 aa4.75□□□□□ -1.65
PATJ-216ENST00000635214 SPENQ96T58 3664 aaKnown RBP4.68□□□□□ -1.66
PATJ-216ENST00000635214 KRTAP1-4P0C5Y4 121 aa4.67□□□□□ -1.66
PATJ-216ENST00000635214 TENM1Q9UKZ4 2725 aa4.65□□□□□ -1.67
PATJ-216ENST00000635214 CELSR1Q9NYQ6 3014 aa4.62□□□□□ -1.67
PATJ-216ENST00000635214 VWFP04275 2813 aa4.62□□□□□ -1.67
PATJ-216ENST00000635214 ZFHX3Q15911 3703 aa4.61□□□□□ -1.67
PATJ-216ENST00000635214 KRTAP10-8P60410 259 aa4.61□□□□□ -1.67
PATJ-216ENST00000635214 PKD1L1Q8TDX9 2849 aa4.6□□□□□ -1.67
PATJ-216ENST00000635214 CSMD1Q96PZ7 3565 aa4.59□□□□□ -1.68
PATJ-216ENST00000635214 DNAH9Q9NYC9 4486 aa4.59□□□□□ -1.68
PATJ-216ENST00000635214 DYNC2H1Q8NCM8 4307 aaKnown RBP4.57□□□□□ -1.68
PATJ-216ENST00000635214 HUWE1Q7Z6Z7 4374 aaKnown RBP4.56□□□□□ -1.68
PATJ-216ENST00000635214 MEGF8Q7Z7M0 2845 aa4.55□□□□□ -1.68
PATJ-216ENST00000635214 TENM3Q9P273 2699 aa4.55□□□□□ -1.68
PATJ-216ENST00000635214 DNAH3Q8TD57 4116 aa4.54□□□□□ -1.68
PATJ-216ENST00000635214 DNHD1Q96M86 4753 aa4.54□□□□□ -1.68
PATJ-216ENST00000635214 TPRXLQ17RH7 258 aa4.53□□□□□ -1.68
PATJ-216ENST00000635214 ZNF469Q96JG9 3925 aaPredicted RBP4.53□□□□□ -1.68
PATJ-216ENST00000635214 XP32Q5T750 250 aa4.52□□□□□ -1.69
PATJ-216ENST00000635214 DNAH6Q9C0G6 4158 aa4.52□□□□□ -1.69
PATJ-216ENST00000635214 TENM2Q9NT68 2774 aa4.52□□□□□ -1.69
PATJ-216ENST00000635214 KRTAP13-3Q3SY46 172 aa4.5□□□□□ -1.69
PATJ-216ENST00000635214 CSMD2Q7Z408 3487 aa4.49□□□□□ -1.69
PATJ-216ENST00000635214 TRRAPQ9Y4A5 3859 aa4.47□□□□□ -1.69
PATJ-216ENST00000635214 DNAH1Q9P2D7 4330 aa4.46□□□□□ -1.7
PATJ-216ENST00000635214 CMYA5Q8N3K9 4069 aa4.44□□□□□ -1.7
PATJ-216ENST00000635214 TGP01266 2768 aa4.39□□□□□ -1.71
PATJ-216ENST00000635214 DNAH11Q96DT5 4516 aa4.39□□□□□ -1.71
PATJ-216ENST00000635214 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
PATJ-216ENST00000635214 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
PATJ-216ENST00000635214 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
PATJ-216ENST00000635214 BIRC6Q9NR09 4857 aa4.37□□□□□ -1.71
PATJ-216ENST00000635214 SVEP1Q4LDE5 3571 aa4.37□□□□□ -1.71
PATJ-216ENST00000635214 PRKDCP78527 4128 aaKnown RBP4.36□□□□□ -1.71
PATJ-216ENST00000635214 KRTAP10-4P60372 401 aaPredicted RBP4.36□□□□□ -1.71
PATJ-216ENST00000635214 PLECQ15149 4684 aaKnown RBP4.36□□□□□ -1.71
PATJ-216ENST00000635214 KRTAP12-1P59990 96 aa4.34□□□□□ -1.71
PATJ-216ENST00000635214 VPS13DQ5THJ4 4388 aa4.34□□□□□ -1.72
PATJ-216ENST00000635214 DNAH10Q8IVF4 4471 aa4.34□□□□□ -1.72
PATJ-216ENST00000635214 DNAH17Q9UFH2 4485 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms