RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-208ENST00000634348 KRTAP29-1A8MX34 341 aaPredicted RBP6.63□□□□□ -1.35
SRSF4-208ENST00000634348 NBEAQ8NFP9 2946 aa6.63□□□□□ -1.35
SRSF4-208ENST00000634348 FRYLO94915 3013 aa6.62□□□□□ -1.35
SRSF4-208ENST00000634348 KRTAP10-2P60368 255 aa6.61□□□□□ -1.35
SRSF4-208ENST00000634348 KRTAP10-1P60331 282 aa6.6□□□□□ -1.35
SRSF4-208ENST00000634348 ITPR1Q14643 2758 aa6.59□□□□□ -1.35
SRSF4-208ENST00000634348 CHD9Q3L8U1 2897 aa6.59□□□□□ -1.35
SRSF4-208ENST00000634348 ITPR2Q14571 2701 aa6.59□□□□□ -1.35
SRSF4-208ENST00000634348 LRBAP50851 2863 aa6.58□□□□□ -1.36
SRSF4-208ENST00000634348 HIVEP1P15822 2718 aa6.58□□□□□ -1.36
SRSF4-208ENST00000634348 ADGRG4Q8IZF6 3080 aa6.53□□□□□ -1.36
SRSF4-208ENST00000634348 ATMQ13315 3056 aa6.53□□□□□ -1.36
SRSF4-208ENST00000634348 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
SRSF4-208ENST00000634348 CELSR2Q9HCU4 2923 aa6.5□□□□□ -1.37
SRSF4-208ENST00000634348 LCE6AA0A183 80 aa6.5□□□□□ -1.37
SRSF4-208ENST00000634348 ZZEF1O43149 2961 aa6.5□□□□□ -1.37
SRSF4-208ENST00000634348 P0C880 135 aa6.49□□□□□ -1.37
SRSF4-208ENST00000634348 FLNCQ14315 2725 aa6.45□□□□□ -1.38
SRSF4-208ENST00000634348 EYSQ5T1H1 3165 aa6.43□□□□□ -1.38
SRSF4-208ENST00000634348 TNRC18O15417 2968 aaPredicted RBP6.42□□□□□ -1.38
SRSF4-208ENST00000634348 DMXL1Q9Y485 3027 aa6.35□□□□□ -1.39
SRSF4-208ENST00000634348 KRTAP10-8P60410 259 aa6.33□□□□□ -1.4
SRSF4-208ENST00000634348 MYO15AQ9UKN7 3530 aa6.32□□□□□ -1.4
SRSF4-208ENST00000634348 DCHS2Q6V1P9 2916 aa6.32□□□□□ -1.4
SRSF4-208ENST00000634348 NF1P21359 2839 aa6.29□□□□□ -1.4
SRSF4-208ENST00000634348 LOC400499M0QZD8 3231 aa6.28□□□□□ -1.4
SRSF4-208ENST00000634348 TENM4Q6N022 2769 aa6.27□□□□□ -1.41
SRSF4-208ENST00000634348 USP34Q70CQ2 3546 aa6.25□□□□□ -1.41
SRSF4-208ENST00000634348 RPS29P62273 56 aaKnown RBP6.24□□□□□ -1.41
SRSF4-208ENST00000634348 NIPBLQ6KC79 2804 aaeCLIP6.24□□□□□ -1.416e-7■□□□□ 10.3
SRSF4-208ENST00000634348 TENM1Q9UKZ4 2725 aa6.24□□□□□ -1.41
SRSF4-208ENST00000634348 H0YAA0 97 aa6.23□□□□□ -1.41
SRSF4-208ENST00000634348 CELSR1Q9NYQ6 3014 aa6.22□□□□□ -1.41
SRSF4-208ENST00000634348 TENM3Q9P273 2699 aa6.21□□□□□ -1.41
SRSF4-208ENST00000634348 SPTBN5Q9NRC6 3674 aaKnown RBP6.21□□□□□ -1.42
SRSF4-208ENST00000634348 WDFY3Q8IZQ1 3526 aa6.2□□□□□ -1.42
SRSF4-208ENST00000634348 KRTAP7-1Q8IUC3 87 aa6.18□□□□□ -1.42
SRSF4-208ENST00000634348 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
SRSF4-208ENST00000634348 ASPMQ8IZT6 3477 aa6.18□□□□□ -1.42
SRSF4-208ENST00000634348 FBN2P35556 2912 aa6.15□□□□□ -1.43
SRSF4-208ENST00000634348 PKD1L1Q8TDX9 2849 aa6.14□□□□□ -1.43
SRSF4-208ENST00000634348 A0A1B0GVY2 172 aa6.14□□□□□ -1.43
SRSF4-208ENST00000634348 ZANQ9Y493 2812 aa6.13□□□□□ -1.43
SRSF4-208ENST00000634348 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
SRSF4-208ENST00000634348 VWFP04275 2813 aa6.09□□□□□ -1.43
SRSF4-208ENST00000634348 PDZD2O15018 2839 aa6.07□□□□□ -1.44
SRSF4-208ENST00000634348 DCHS1Q96JQ0 3298 aa6.05□□□□□ -1.44
SRSF4-208ENST00000634348 ZFHX4Q86UP3 3567 aa6.04□□□□□ -1.44
SRSF4-208ENST00000634348 INE1O15225 51 aa6□□□□□ -1.45
SRSF4-208ENST00000634348 KRTAP13-1Q8IUC0 172 aa5.99□□□□□ -1.45
SRSF4-208ENST00000634348 TGP01266 2768 aa5.99□□□□□ -1.45
SRSF4-208ENST00000634348 PRO2289Q9P1D8 64 aa5.99□□□□□ -1.45
SRSF4-208ENST00000634348 SRRM2Q9UQ35 2752 aaKnown RBP5.94□□□□□ -1.46
SRSF4-208ENST00000634348 RELNP78509 3460 aa5.91□□□□□ -1.46
SRSF4-208ENST00000634348 TENM2Q9NT68 2774 aa5.9□□□□□ -1.47
SRSF4-208ENST00000634348 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
SRSF4-208ENST00000634348 CUBNO60494 3623 aa5.89□□□□□ -1.47
SRSF4-208ENST00000634348 LAMA5O15230 3695 aa5.89□□□□□ -1.47
SRSF4-208ENST00000634348 CSMD1Q96PZ7 3565 aa5.86□□□□□ -1.47
SRSF4-208ENST00000634348 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
SRSF4-208ENST00000634348 XP32Q5T750 250 aa5.86□□□□□ -1.47
SRSF4-208ENST00000634348 MXRA5Q9NR99 2828 aa5.79□□□□□ -1.48
SRSF4-208ENST00000634348 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
SRSF4-208ENST00000634348 HRNRQ86YZ3 2850 aaPredicted RBP5.78□□□□□ -1.48
SRSF4-208ENST00000634348 NBPF19A0A087WUL8 3843 aa5.77□□□□□ -1.48
SRSF4-208ENST00000634348 TPRXLQ17RH7 258 aa5.76□□□□□ -1.49
SRSF4-208ENST00000634348 KRTAP1-4P0C5Y4 121 aa5.76□□□□□ -1.49
SRSF4-208ENST00000634348 ZFHX3Q15911 3703 aa5.72□□□□□ -1.49
SRSF4-208ENST00000634348 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
SRSF4-208ENST00000634348 SMG1Q96Q15 3661 aaKnown RBP5.67□□□□□ -1.5
SRSF4-208ENST00000634348 FBN1P35555 2871 aaKnown RBP5.65□□□□□ -1.5
SRSF4-208ENST00000634348 COL7A1Q02388 2944 aa5.64□□□□□ -1.51
SRSF4-208ENST00000634348 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
SRSF4-208ENST00000634348 KRTAP12-1P59990 96 aa5.6□□□□□ -1.51
SRSF4-208ENST00000634348 SVEP1Q4LDE5 3571 aa5.59□□□□□ -1.51
SRSF4-208ENST00000634348 KRTAP13-3Q3SY46 172 aa5.56□□□□□ -1.52
SRSF4-208ENST00000634348 SPENQ96T58 3664 aaKnown RBP5.54□□□□□ -1.52
SRSF4-208ENST00000634348 MEGF8Q7Z7M0 2845 aa5.5□□□□□ -1.53
SRSF4-208ENST00000634348 FBN3Q75N90 2809 aa5.5□□□□□ -1.53
SRSF4-208ENST00000634348 DMDP11532 3685 aa5.46□□□□□ -1.53
SRSF4-208ENST00000634348 CSMD2Q7Z408 3487 aa5.45□□□□□ -1.54
SRSF4-208ENST00000634348 MUC3AQ02505 3323 aa5.42□□□□□ -1.54
SRSF4-208ENST00000634348 KRTAP21-3Q3LHN1 58 aa5.4□□□□□ -1.55
SRSF4-208ENST00000634348 OTOGQ6ZRI0 2925 aa5.38□□□□□ -1.55
SRSF4-208ENST00000634348 CRCT1Q9UGL9 99 aa5.33□□□□□ -1.56
SRSF4-208ENST00000634348 TRRAPQ9Y4A5 3859 aa5.26□□□□□ -1.57
SRSF4-208ENST00000634348 KRTAP3-1Q9BYR8 98 aa5.26□□□□□ -1.57
SRSF4-208ENST00000634348 CSMD3Q7Z407 3707 aa5.24□□□□□ -1.57
SRSF4-208ENST00000634348 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
SRSF4-208ENST00000634348 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
SRSF4-208ENST00000634348 VPS13CQ709C8 3753 aa5.08□□□□□ -1.6
SRSF4-208ENST00000634348 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
SRSF4-208ENST00000634348 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
SRSF4-208ENST00000634348 KRTAP3-3Q9BYR6 98 aa4.88□□□□□ -1.63
SRSF4-208ENST00000634348 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
SRSF4-208ENST00000634348 KRTAP3-2Q9BYR7 98 aa4.88□□□□□ -1.63
SRSF4-208ENST00000634348 KRTAP4-5Q9BYR2 181 aa4.87□□□□□ -1.63
SRSF4-208ENST00000634348 MT1HL1P0DM35 61 aa4.84□□□□□ -1.64
SRSF4-208ENST00000634348 ANK3Q12955 4377 aaKnown RBP4.82□□□□□ -1.64
SRSF4-208ENST00000634348 BSNQ9UPA5 3926 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms