RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 ADGRG4Q8IZF6 3080 aa5.68□□□□□ -1.5
CLTCL1-211ENST00000621271 Q6ZRN7 208 aaPredicted RBP5.67□□□□□ -1.5
CLTCL1-211ENST00000621271 ADM2Q7Z4H4 148 aa5.67□□□□□ -1.5
CLTCL1-211ENST00000621271 RPS29P62273 56 aaKnown RBP5.67□□□□□ -1.5
CLTCL1-211ENST00000621271 RPL37P61927 97 aaKnown RBP5.66□□□□□ -1.5
CLTCL1-211ENST00000621271 CELSR3Q9NYQ7 3312 aa5.66□□□□□ -1.5
CLTCL1-211ENST00000621271 NBEAL2Q6ZNJ1 2754 aa5.65□□□□□ -1.5
CLTCL1-211ENST00000621271 ZANQ9Y493 2812 aa5.65□□□□□ -1.5
CLTCL1-211ENST00000621271 ASB16-AS1Q495Z4 193 aa5.65□□□□□ -1.51
CLTCL1-211ENST00000621271 MUC3AQ02505 3323 aa5.65□□□□□ -1.51
CLTCL1-211ENST00000621271 LRBAP50851 2863 aa5.64□□□□□ -1.51
CLTCL1-211ENST00000621271 DCHS1Q96JQ0 3298 aa5.64□□□□□ -1.51
CLTCL1-211ENST00000621271 H1FX-AS1Q4G0G2 97 aa5.63□□□□□ -1.51
CLTCL1-211ENST00000621271 MXRA5Q9NR99 2828 aa5.61□□□□□ -1.51
CLTCL1-211ENST00000621271 PDZD2O15018 2839 aa5.6□□□□□ -1.51
CLTCL1-211ENST00000621271 C20orf166-AS1Q96NR2 134 aa5.6□□□□□ -1.51
CLTCL1-211ENST00000621271 A6NN06 94 aa5.6□□□□□ -1.51
CLTCL1-211ENST00000621271 CRYBG3Q68DQ2 2970 aa5.59□□□□□ -1.51
CLTCL1-211ENST00000621271 SPATA8Q6RVD6 105 aa5.56□□□□□ -1.52
CLTCL1-211ENST00000621271 OTOGQ6ZRI0 2925 aa5.55□□□□□ -1.52
CLTCL1-211ENST00000621271 LOC400499M0QZD8 3231 aa5.55□□□□□ -1.52
CLTCL1-211ENST00000621271 ROMO1P60602 79 aa5.55□□□□□ -1.52
CLTCL1-211ENST00000621271 KRTAP11-1Q8IUC1 163 aa5.55□□□□□ -1.52
CLTCL1-211ENST00000621271 HRNRQ86YZ3 2850 aaPredicted RBP5.55□□□□□ -1.52
CLTCL1-211ENST00000621271 KRTAP13-2Q52LG2 175 aa5.54□□□□□ -1.52
CLTCL1-211ENST00000621271 A8MUU9 505 aa5.53□□□□□ -1.52
CLTCL1-211ENST00000621271 FBN2P35556 2912 aa5.53□□□□□ -1.52
CLTCL1-211ENST00000621271 MYO15AQ9UKN7 3530 aa5.52□□□□□ -1.53
CLTCL1-211ENST00000621271 NOTCH2NLQ7Z3S9 236 aa5.51□□□□□ -1.53
CLTCL1-211ENST00000621271 KRTAP7-1Q8IUC3 87 aa5.51□□□□□ -1.53
CLTCL1-211ENST00000621271 A8MU10 97 aa5.5□□□□□ -1.53
CLTCL1-211ENST00000621271 NF1P21359 2839 aa5.5□□□□□ -1.53
CLTCL1-211ENST00000621271 DCHS2Q6V1P9 2916 aa5.47□□□□□ -1.53
CLTCL1-211ENST00000621271 KRTAP13-1Q8IUC0 172 aa5.45□□□□□ -1.54
CLTCL1-211ENST00000621271 SPEGQ15772 3267 aa5.41□□□□□ -1.54
CLTCL1-211ENST00000621271 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
CLTCL1-211ENST00000621271 KRTAP16-1A8MUX0 517 aa5.39□□□□□ -1.55
CLTCL1-211ENST00000621271 FBN3Q75N90 2809 aa5.35□□□□□ -1.55
CLTCL1-211ENST00000621271 TNP1P09430 55 aa5.34□□□□□ -1.55
CLTCL1-211ENST00000621271 TENM3Q9P273 2699 aa5.33□□□□□ -1.56
CLTCL1-211ENST00000621271 XP32Q5T750 250 aa5.32□□□□□ -1.56
CLTCL1-211ENST00000621271 RELNP78509 3460 aa5.3□□□□□ -1.56
CLTCL1-211ENST00000621271 A0A1B0GVY2 172 aa5.3□□□□□ -1.56
CLTCL1-211ENST00000621271 TPRXLQ17RH7 258 aa5.3□□□□□ -1.56
CLTCL1-211ENST00000621271 TENM1Q9UKZ4 2725 aa5.28□□□□□ -1.56
CLTCL1-211ENST00000621271 KRTAP10-8P60410 259 aa5.28□□□□□ -1.56
CLTCL1-211ENST00000621271 LAMA5O15230 3695 aa5.27□□□□□ -1.57
CLTCL1-211ENST00000621271 DMDP11532 3685 aa5.27□□□□□ -1.57
CLTCL1-211ENST00000621271 KRTAP1-4P0C5Y4 121 aa5.27□□□□□ -1.57
CLTCL1-211ENST00000621271 KRTAP10-10P60014 251 aa5.26□□□□□ -1.57
CLTCL1-211ENST00000621271 TENM2Q9NT68 2774 aa5.25□□□□□ -1.57
CLTCL1-211ENST00000621271 ZFHX3Q15911 3703 aa5.23□□□□□ -1.57
CLTCL1-211ENST00000621271 FBN1P35555 2871 aaKnown RBP5.22□□□□□ -1.57
CLTCL1-211ENST00000621271 SMG1Q96Q15 3661 aaKnown RBP5.21□□□□□ -1.57
CLTCL1-211ENST00000621271 NBPF19A0A087WUL8 3843 aa5.21□□□□□ -1.58
CLTCL1-211ENST00000621271 TGP01266 2768 aa5.21□□□□□ -1.58
CLTCL1-211ENST00000621271 PRO2289Q9P1D8 64 aa5.2□□□□□ -1.58
CLTCL1-211ENST00000621271 NDUFAF8A1L188 74 aa5.2□□□□□ -1.58
CLTCL1-211ENST00000621271 CELSR1Q9NYQ6 3014 aa5.19□□□□□ -1.58
CLTCL1-211ENST00000621271 VWFP04275 2813 aa5.18□□□□□ -1.58
CLTCL1-211ENST00000621271 PKD1L1Q8TDX9 2849 aa5.17□□□□□ -1.58
CLTCL1-211ENST00000621271 ASPMQ8IZT6 3477 aa5.16□□□□□ -1.58
CLTCL1-211ENST00000621271 KRTAP13-3Q3SY46 172 aa5.14□□□□□ -1.59
CLTCL1-211ENST00000621271 C10orf95Q9H7T3 257 aa5.11□□□□□ -1.59
CLTCL1-211ENST00000621271 H0YAA0 97 aa5.1□□□□□ -1.59
CLTCL1-211ENST00000621271 WDFY3Q8IZQ1 3526 aa5.1□□□□□ -1.59
CLTCL1-211ENST00000621271 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
CLTCL1-211ENST00000621271 ZFHX4Q86UP3 3567 aa5.09□□□□□ -1.6
CLTCL1-211ENST00000621271 ANK3Q12955 4377 aaKnown RBP5.06□□□□□ -1.6
CLTCL1-211ENST00000621271 CSMD1Q96PZ7 3565 aa4.96□□□□□ -1.61
CLTCL1-211ENST00000621271 P0C880 135 aa4.93□□□□□ -1.62
CLTCL1-211ENST00000621271 BSNQ9UPA5 3926 aa4.93□□□□□ -1.62
CLTCL1-211ENST00000621271 CSMD2Q7Z408 3487 aa4.9□□□□□ -1.62
CLTCL1-211ENST00000621271 MEGF8Q7Z7M0 2845 aa4.88□□□□□ -1.63
CLTCL1-211ENST00000621271 SPENQ96T58 3664 aaKnown RBP4.87□□□□□ -1.63
CLTCL1-211ENST00000621271 SRRM2Q9UQ35 2752 aaKnown RBP4.83□□□□□ -1.64
CLTCL1-211ENST00000621271 DNHD1Q96M86 4753 aa4.81□□□□□ -1.64
CLTCL1-211ENST00000621271 TRRAPQ9Y4A5 3859 aa4.78□□□□□ -1.64
CLTCL1-211ENST00000621271 AKAP9Q99996 3911 aa4.77□□□□□ -1.65
CLTCL1-211ENST00000621271 COL7A1Q02388 2944 aa4.76□□□□□ -1.65
CLTCL1-211ENST00000621271 SVEP1Q4LDE5 3571 aa4.72□□□□□ -1.65
CLTCL1-211ENST00000621271 KRTAP12-2P59991 146 aa4.72□□□□□ -1.65
CLTCL1-211ENST00000621271 KRTAP3-1Q9BYR8 98 aa4.7□□□□□ -1.66
CLTCL1-211ENST00000621271 KRTAP12-1P59990 96 aa4.66□□□□□ -1.66
CLTCL1-211ENST00000621271 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.66
CLTCL1-211ENST00000621271 ZNF469Q96JG9 3925 aaPredicted RBP4.61□□□□□ -1.67
CLTCL1-211ENST00000621271 MT1HL1P0DM35 61 aa4.61□□□□□ -1.67
CLTCL1-211ENST00000621271 KRTAP10-6P60371 365 aaPredicted RBP4.59□□□□□ -1.68
CLTCL1-211ENST00000621271 KRTAP4-5Q9BYR2 181 aa4.58□□□□□ -1.68
CLTCL1-211ENST00000621271 ALMS1Q8TCU4 4167 aa4.57□□□□□ -1.68
CLTCL1-211ENST00000621271 DNAH9Q9NYC9 4486 aa4.57□□□□□ -1.68
CLTCL1-211ENST00000621271 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
CLTCL1-211ENST00000621271 HUWE1Q7Z6Z7 4374 aaKnown RBP4.56□□□□□ -1.68
CLTCL1-211ENST00000621271 ANK2Q01484 3957 aa4.5□□□□□ -1.69
CLTCL1-211ENST00000621271 KRTAP10-4P60372 401 aaPredicted RBP4.49□□□□□ -1.69
CLTCL1-211ENST00000621271 CUBNO60494 3623 aa4.45□□□□□ -1.7
CLTCL1-211ENST00000621271 DNAH11Q96DT5 4516 aa4.44□□□□□ -1.7
CLTCL1-211ENST00000621271 PLECQ15149 4684 aaKnown RBP4.44□□□□□ -1.7
CLTCL1-211ENST00000621271 KRTAP3-2Q9BYR7 98 aa4.43□□□□□ -1.7
CLTCL1-211ENST00000621271 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms