RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 OXTP01178 125 aa10.75□□□□□ -0.69
AC008878.3-201ENST00000617428 NOTCH2NLQ7Z3S9 236 aa10.7□□□□□ -0.7
AC008878.3-201ENST00000617428 KRTAP29-1A8MX34 341 aaPredicted RBP10.68□□□□□ -0.7
AC008878.3-201ENST00000617428 M0QZ58 72 aa10.67□□□□□ -0.7
AC008878.3-201ENST00000617428 KRTAP7-1Q8IUC3 87 aa10.67□□□□□ -0.7
AC008878.3-201ENST00000617428 Q5VV11 94 aa10.66□□□□□ -0.7
AC008878.3-201ENST00000617428 LOC400499M0QZD8 3231 aa10.63□□□□□ -0.71
AC008878.3-201ENST00000617428 KRTAP21-3Q3LHN1 58 aa10.63□□□□□ -0.71
AC008878.3-201ENST00000617428 NF1P21359 2839 aa10.62□□□□□ -0.71
AC008878.3-201ENST00000617428 Q5XG85 94 aa10.62□□□□□ -0.71
AC008878.3-201ENST00000617428 RPL37P61927 97 aaKnown RBP10.6□□□□□ -0.71
AC008878.3-201ENST00000617428 PRAC1Q96KF2 57 aa10.57□□□□□ -0.72
AC008878.3-201ENST00000617428 TENM1Q9UKZ4 2725 aa10.57□□□□□ -0.72
AC008878.3-201ENST00000617428 KRTAP13-2Q52LG2 175 aa10.57□□□□□ -0.72
AC008878.3-201ENST00000617428 ADM2Q7Z4H4 148 aa10.55□□□□□ -0.72
AC008878.3-201ENST00000617428 ASB16-AS1Q495Z4 193 aa10.54□□□□□ -0.72
AC008878.3-201ENST00000617428 H1FX-AS1Q4G0G2 97 aa10.53□□□□□ -0.72
AC008878.3-201ENST00000617428 FBN2P35556 2912 aa10.53□□□□□ -0.72
AC008878.3-201ENST00000617428 RPS29P62273 56 aaKnown RBP10.53□□□□□ -0.72
AC008878.3-201ENST00000617428 USP34Q70CQ2 3546 aa10.52□□□□□ -0.73
AC008878.3-201ENST00000617428 KRTAP13-1Q8IUC0 172 aa10.5□□□□□ -0.73
AC008878.3-201ENST00000617428 MYO15AQ9UKN7 3530 aa10.49□□□□□ -0.73
AC008878.3-201ENST00000617428 SPATA8Q6RVD6 105 aa10.48□□□□□ -0.73
AC008878.3-201ENST00000617428 PLAC4Q8WY50 150 aa10.45□□□□□ -0.74
AC008878.3-201ENST00000617428 PKD1L1Q8TDX9 2849 aa10.41□□□□□ -0.74
AC008878.3-201ENST00000617428 ROMO1P60602 79 aa10.39□□□□□ -0.75
AC008878.3-201ENST00000617428 TENM2Q9NT68 2774 aa10.39□□□□□ -0.75
AC008878.3-201ENST00000617428 HRNRQ86YZ3 2850 aaPredicted RBP10.35□□□□□ -0.75
AC008878.3-201ENST00000617428 MXRA5Q9NR99 2828 aa10.29□□□□□ -0.76
AC008878.3-201ENST00000617428 C20orf166-AS1Q96NR2 134 aa10.29□□□□□ -0.76
AC008878.3-201ENST00000617428 A8MUU9 505 aa10.27□□□□□ -0.76
AC008878.3-201ENST00000617428 DCHS1Q96JQ0 3298 aa10.22□□□□□ -0.77
AC008878.3-201ENST00000617428 MUC3AQ02505 3323 aa10.19□□□□□ -0.78
AC008878.3-201ENST00000617428 CELSR1Q9NYQ6 3014 aa10.18□□□□□ -0.78
AC008878.3-201ENST00000617428 A8MU10 97 aa10.18□□□□□ -0.78
AC008878.3-201ENST00000617428 VWFP04275 2813 aa10.16□□□□□ -0.78
AC008878.3-201ENST00000617428 RELNP78509 3460 aa10.11□□□□□ -0.79
AC008878.3-201ENST00000617428 KRTAP1-4P0C5Y4 121 aa10.09□□□□□ -0.79
AC008878.3-201ENST00000617428 WDFY3Q8IZQ1 3526 aa10.08□□□□□ -0.8
AC008878.3-201ENST00000617428 A0A0A0MQY5 61 aa10.04□□□□□ -0.8
AC008878.3-201ENST00000617428 LAMA5O15230 3695 aa10□□□□□ -0.81
AC008878.3-201ENST00000617428 TGP01266 2768 aa10□□□□□ -0.81
AC008878.3-201ENST00000617428 SRRM2Q9UQ35 2752 aaKnown RBP9.99□□□□□ -0.81
AC008878.3-201ENST00000617428 XP32Q5T750 250 aa9.98□□□□□ -0.81
AC008878.3-201ENST00000617428 PDZD2O15018 2839 aa9.97□□□□□ -0.81
AC008878.3-201ENST00000617428 ASPMQ8IZT6 3477 aa9.95□□□□□ -0.82
AC008878.3-201ENST00000617428 FBN1P35555 2871 aaKnown RBP9.9□□□□□ -0.83
AC008878.3-201ENST00000617428 DMDP11532 3685 aa9.88□□□□□ -0.83
AC008878.3-201ENST00000617428 A0A1B0GVY2 172 aa9.84□□□□□ -0.83
AC008878.3-201ENST00000617428 TNP1P09430 55 aa9.82□□□□□ -0.84
AC008878.3-201ENST00000617428 KRTAP25-1Q3LHN0 102 aa9.81□□□□□ -0.84
AC008878.3-201ENST00000617428 H3BS24 57 aa9.8□□□□□ -0.84
AC008878.3-201ENST00000617428 TPRXLQ17RH7 258 aa9.8□□□□□ -0.84
AC008878.3-201ENST00000617428 A6NN06 94 aa9.8□□□□□ -0.84
AC008878.3-201ENST00000617428 ZFHX4Q86UP3 3567 aa9.75□□□□□ -0.85
AC008878.3-201ENST00000617428 KRTAP10-8P60410 259 aa9.71□□□□□ -0.85
AC008878.3-201ENST00000617428 KRTAP13-3Q3SY46 172 aa9.67□□□□□ -0.86
AC008878.3-201ENST00000617428 KRTAP16-1A8MUX0 517 aa9.65□□□□□ -0.87
AC008878.3-201ENST00000617428 KRTAP10-10P60014 251 aa9.63□□□□□ -0.87
AC008878.3-201ENST00000617428 OTOGQ6ZRI0 2925 aa9.62□□□□□ -0.87
AC008878.3-201ENST00000617428 ZFHX3Q15911 3703 aa9.6□□□□□ -0.87
AC008878.3-201ENST00000617428 C10orf95Q9H7T3 257 aa9.51□□□□□ -0.89
AC008878.3-201ENST00000617428 SMG1Q96Q15 3661 aaKnown RBP9.49□□□□□ -0.89
AC008878.3-201ENST00000617428 NBPF19A0A087WUL8 3843 aa9.46□□□□□ -0.89
AC008878.3-201ENST00000617428 NDUFAF8A1L188 74 aa9.45□□□□□ -0.9
AC008878.3-201ENST00000617428 H0YAA0 97 aa9.45□□□□□ -0.9
AC008878.3-201ENST00000617428 P0C880 135 aa9.44□□□□□ -0.9
AC008878.3-201ENST00000617428 PP632Q6XCG6 107 aa9.41□□□□□ -0.9
AC008878.3-201ENST00000617428 CSMD1Q96PZ7 3565 aa9.39□□□□□ -0.91
AC008878.3-201ENST00000617428 FBN3Q75N90 2809 aa9.37□□□□□ -0.91
AC008878.3-201ENST00000617428 PRO2289Q9P1D8 64 aa9.33□□□□□ -0.92
AC008878.3-201ENST00000617428 COL7A1Q02388 2944 aa9.3□□□□□ -0.92
AC008878.3-201ENST00000617428 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
AC008878.3-201ENST00000617428 CSMD2Q7Z408 3487 aa9.22□□□□□ -0.93
AC008878.3-201ENST00000617428 CUBNO60494 3623 aa9.21□□□□□ -0.94
AC008878.3-201ENST00000617428 SPENQ96T58 3664 aaKnown RBP9.17□□□□□ -0.94
AC008878.3-201ENST00000617428 MEGF8Q7Z7M0 2845 aa9.16□□□□□ -0.94
AC008878.3-201ENST00000617428 KRTAP12-2P59991 146 aa8.95□□□□□ -0.98
AC008878.3-201ENST00000617428 BSNQ9UPA5 3926 aa8.94□□□□□ -0.98
AC008878.3-201ENST00000617428 KRTAP3-1Q9BYR8 98 aa8.92□□□□□ -0.98
AC008878.3-201ENST00000617428 TRRAPQ9Y4A5 3859 aa8.91□□□□□ -0.98
AC008878.3-201ENST00000617428 ANK3Q12955 4377 aaKnown RBP8.84□□□□□ -0.99
AC008878.3-201ENST00000617428 MT1HL1P0DM35 61 aa8.81□□□□□ -1
AC008878.3-201ENST00000617428 KRTAP12-1P59990 96 aa8.81□□□□□ -1
AC008878.3-201ENST00000617428 KRTAP13-4Q3LI77 160 aa8.77□□□□□ -1.01
AC008878.3-201ENST00000617428 KRTAP4-5Q9BYR2 181 aa8.67□□□□□ -1.02
AC008878.3-201ENST00000617428 KRTAP10-6P60371 365 aaPredicted RBP8.61□□□□□ -1.03
AC008878.3-201ENST00000617428 KRTAP10-4P60372 401 aaPredicted RBP8.53□□□□□ -1.04
AC008878.3-201ENST00000617428 VPS13CQ709C8 3753 aa8.47□□□□□ -1.05
AC008878.3-201ENST00000617428 KRTAP15-1Q3LI76 137 aa8.45□□□□□ -1.06
AC008878.3-201ENST00000617428 ZNF469Q96JG9 3925 aaPredicted RBP8.4□□□□□ -1.06
AC008878.3-201ENST00000617428 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
AC008878.3-201ENST00000617428 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
AC008878.3-201ENST00000617428 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
AC008878.3-201ENST00000617428 KRTAP10-12P60413 245 aa8.19□□□□□ -1.1
AC008878.3-201ENST00000617428 CRCT1Q9UGL9 99 aa8.1□□□□□ -1.11
AC008878.3-201ENST00000617428 DNHD1Q96M86 4753 aa8.1□□□□□ -1.11
AC008878.3-201ENST00000617428 CSMD3Q7Z407 3707 aa8.09□□□□□ -1.11
AC008878.3-201ENST00000617428 AKAP9Q99996 3911 aa8.08□□□□□ -1.12
AC008878.3-201ENST00000617428 DNAH5Q8TE73 4624 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 338.2 ms