RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-223ENST00000604624 ZCCHC13Q8WW36 166 aaKnown RBP2.57□□□□□ -2
KCNMA1-223ENST00000604624 TENM1Q9UKZ4 2725 aa2.57□□□□□ -2
KCNMA1-223ENST00000604624 EIF4EBP3O60516 100 aaPredicted RBP2.57□□□□□ -2
KCNMA1-223ENST00000604624 CUBNO60494 3623 aa2.57□□□□□ -2
KCNMA1-223ENST00000604624 OCR1Q9BZK8 76 aa2.56□□□□□ -2
KCNMA1-223ENST00000604624 ADM2Q7Z4H4 148 aa2.55□□□□□ -2
KCNMA1-223ENST00000604624 P0C880 135 aa2.55□□□□□ -2
KCNMA1-223ENST00000604624 CSMD2Q7Z408 3487 aa2.55□□□□□ -2
KCNMA1-223ENST00000604624 KRTAP1-1Q07627 177 aa2.54□□□□□ -2
KCNMA1-223ENST00000604624 CSMD1Q96PZ7 3565 aa2.54□□□□□ -2
KCNMA1-223ENST00000604624 TNP2Q05952 138 aa2.54□□□□□ -2
KCNMA1-223ENST00000604624 VWFP04275 2813 aa2.54□□□□□ -2
KCNMA1-223ENST00000604624 Q5XG85 94 aa2.53□□□□□ -2.01
KCNMA1-223ENST00000604624 Q6ZR54 194 aa2.53□□□□□ -2.01
KCNMA1-223ENST00000604624 KRTAP24-1Q3LI83 254 aa2.52□□□□□ -2.01
KCNMA1-223ENST00000604624 PRR34Q9NV39 138 aa2.52□□□□□ -2.01
KCNMA1-223ENST00000604624 CNBPP62633 177 aaKnown RBP2.51□□□□□ -2.01
KCNMA1-223ENST00000604624 Q5W150 140 aa2.5□□□□□ -2.01
KCNMA1-223ENST00000604624 KRTAP21-3Q3LHN1 58 aa2.5□□□□□ -2.01
KCNMA1-223ENST00000604624 K7EIL1 84 aa2.49□□□□□ -2.01
KCNMA1-223ENST00000604624 KRTAP10-11P60412 298 aa2.49□□□□□ -2.01
KCNMA1-223ENST00000604624 CASC10Q5T4H9 136 aa2.49□□□□□ -2.01
KCNMA1-223ENST00000604624 KRTAP25-1Q3LHN0 102 aa2.49□□□□□ -2.01
KCNMA1-223ENST00000604624 GIG44P09565 113 aaPredicted RBP2.49□□□□□ -2.01
KCNMA1-223ENST00000604624 PKD1L1Q8TDX9 2849 aa2.49□□□□□ -2.01
KCNMA1-223ENST00000604624 CYSTM1Q9H1C7 97 aa2.48□□□□□ -2.01
KCNMA1-223ENST00000604624 PANO1I0J062 215 aa2.47□□□□□ -2.01
KCNMA1-223ENST00000604624 SVEP1Q4LDE5 3571 aa2.46□□□□□ -2.02
KCNMA1-223ENST00000604624 MMP24-AS1A0A0U1RRL7 71 aa2.45□□□□□ -2.02
KCNMA1-223ENST00000604624 A8MUU9 505 aa2.45□□□□□ -2.02
KCNMA1-223ENST00000604624 A8MU10 97 aa2.45□□□□□ -2.02
KCNMA1-223ENST00000604624 TGP01266 2768 aa2.45□□□□□ -2.02
KCNMA1-223ENST00000604624 TNP1P09430 55 aa2.44□□□□□ -2.02
KCNMA1-223ENST00000604624 DNHD1Q96M86 4753 aa2.44□□□□□ -2.02
KCNMA1-223ENST00000604624 MXRA5Q9NR99 2828 aa2.44□□□□□ -2.02
KCNMA1-223ENST00000604624 ZANQ9Y493 2812 aa2.43□□□□□ -2.02
KCNMA1-223ENST00000604624 PP632Q6XCG6 107 aa2.43□□□□□ -2.02
KCNMA1-223ENST00000604624 ASB16-AS1Q495Z4 193 aa2.43□□□□□ -2.02
KCNMA1-223ENST00000604624 NBPF19A0A087WUL8 3843 aa2.42□□□□□ -2.02
KCNMA1-223ENST00000604624 HRNRQ86YZ3 2850 aaPredicted RBP2.42□□□□□ -2.02
KCNMA1-223ENST00000604624 SPRR1BP22528 89 aa2.42□□□□□ -2.02
KCNMA1-223ENST00000604624 TENM2Q9NT68 2774 aa2.41□□□□□ -2.02
KCNMA1-223ENST00000604624 KRTAP10-8P60410 259 aa2.4□□□□□ -2.03
KCNMA1-223ENST00000604624 LINC00472Q9H8W2 130 aa2.39□□□□□ -2.03
KCNMA1-223ENST00000604624 OTOGQ6ZRI0 2925 aa2.39□□□□□ -2.03
KCNMA1-223ENST00000604624 COL7A1Q02388 2944 aa2.39□□□□□ -2.03
KCNMA1-223ENST00000604624 MEGF8Q7Z7M0 2845 aa2.39□□□□□ -2.03
KCNMA1-223ENST00000604624 OXTP01178 125 aa2.39□□□□□ -2.03
KCNMA1-223ENST00000604624 FBN2P35556 2912 aa2.37□□□□□ -2.03
KCNMA1-223ENST00000604624 RYR2Q92736 4967 aa2.37□□□□□ -2.03
KCNMA1-223ENST00000604624 A6NN06 94 aa2.36□□□□□ -2.03
KCNMA1-223ENST00000604624 VPS13CQ709C8 3753 aa2.36□□□□□ -2.03
KCNMA1-223ENST00000604624 PLAC8Q9NZF1 115 aa2.36□□□□□ -2.03
KCNMA1-223ENST00000604624 KRTAP4-16G5E9R7 235 aaPredicted RBP2.35□□□□□ -2.03
KCNMA1-223ENST00000604624 KRTAP26-1Q6PEX3 210 aa2.35□□□□□ -2.03
KCNMA1-223ENST00000604624 CSMD3Q7Z407 3707 aa2.35□□□□□ -2.03
KCNMA1-223ENST00000604624 TENM4Q6N022 2769 aa2.35□□□□□ -2.03
KCNMA1-223ENST00000604624 KRTAP10-3P60369 221 aa2.34□□□□□ -2.04
KCNMA1-223ENST00000604624 KRTAP11-1Q8IUC1 163 aa2.32□□□□□ -2.04
KCNMA1-223ENST00000604624 A0A087X002 238 aa2.31□□□□□ -2.04
KCNMA1-223ENST00000604624 AKAP9Q99996 3911 aa2.3□□□□□ -2.04
KCNMA1-223ENST00000604624 BSNQ9UPA5 3926 aa2.3□□□□□ -2.04
KCNMA1-223ENST00000604624 KRTAP10-2P60368 255 aa2.29□□□□□ -2.04
KCNMA1-223ENST00000604624 NOTCH2NLQ7Z3S9 236 aa2.29□□□□□ -2.04
KCNMA1-223ENST00000604624 SPRR1AP35321 89 aa2.28□□□□□ -2.04
KCNMA1-223ENST00000604624 PRO2289Q9P1D8 64 aa2.28□□□□□ -2.04
KCNMA1-223ENST00000604624 A0A1B0GVY2 172 aa2.27□□□□□ -2.05
KCNMA1-223ENST00000604624 KRTAP10-1P60331 282 aa2.27□□□□□ -2.05
KCNMA1-223ENST00000604624 RYR1P21817 5038 aa2.27□□□□□ -2.05
KCNMA1-223ENST00000604624 BIRC6Q9NR09 4857 aa2.26□□□□□ -2.05
KCNMA1-223ENST00000604624 KRTAP1-5Q9BYS1 174 aa2.25□□□□□ -2.05
KCNMA1-223ENST00000604624 CMYA5Q8N3K9 4069 aa2.23□□□□□ -2.05
KCNMA1-223ENST00000604624 HERC2O95714 4834 aa2.23□□□□□ -2.05
KCNMA1-223ENST00000604624 PLECQ15149 4684 aaKnown RBP2.23□□□□□ -2.05
KCNMA1-223ENST00000604624 KRTAP29-1A8MX34 341 aaPredicted RBP2.22□□□□□ -2.05
KCNMA1-223ENST00000604624 KRTAP10-10P60014 251 aa2.22□□□□□ -2.05
KCNMA1-223ENST00000604624 RYR3Q15413 4870 aa2.22□□□□□ -2.05
KCNMA1-223ENST00000604624 ANK3Q12955 4377 aaKnown RBP2.22□□□□□ -2.05
KCNMA1-223ENST00000604624 LCE6AA0A183 80 aa2.19□□□□□ -2.06
KCNMA1-223ENST00000604624 H0YAA0 97 aa2.19□□□□□ -2.06
KCNMA1-223ENST00000604624 KIAA1109Q2LD37 5005 aa2.19□□□□□ -2.06
KCNMA1-223ENST00000604624 KRTAP12-2P59991 146 aa2.19□□□□□ -2.06
KCNMA1-223ENST00000604624 FBN1P35555 2871 aaKnown RBP2.19□□□□□ -2.06
KCNMA1-223ENST00000604624 Q6ZRN7 208 aaPredicted RBP2.18□□□□□ -2.06
KCNMA1-223ENST00000604624 HYDINQ4G0P3 5121 aa2.18□□□□□ -2.06
KCNMA1-223ENST00000604624 PCLOQ9Y6V0 5065 aa2.18□□□□□ -2.06
KCNMA1-223ENST00000604624 ABCA13Q86UQ4 5058 aa2.17□□□□□ -2.06
KCNMA1-223ENST00000604624 RPS29P62273 56 aaKnown RBP2.16□□□□□ -2.06
KCNMA1-223ENST00000604624 LYSTQ99698 3801 aa2.16□□□□□ -2.06
KCNMA1-223ENST00000604624 KRTAP13-2Q52LG2 175 aa2.15□□□□□ -2.06
KCNMA1-223ENST00000604624 CRCT1Q9UGL9 99 aa2.14□□□□□ -2.07
KCNMA1-223ENST00000604624 TRRAPQ9Y4A5 3859 aa2.13□□□□□ -2.07
KCNMA1-223ENST00000604624 HMCN2Q8NDA2 5059 aa2.13□□□□□ -2.07
KCNMA1-223ENST00000604624 KRTAP13-1Q8IUC0 172 aa2.12□□□□□ -2.07
KCNMA1-223ENST00000604624 DNAH11Q96DT5 4516 aa2.12□□□□□ -2.07
KCNMA1-223ENST00000604624 FBN3Q75N90 2809 aa2.12□□□□□ -2.07
KCNMA1-223ENST00000604624 KMT2CQ8NEZ4 4911 aaKnown RBP2.12□□□□□ -2.07
KCNMA1-223ENST00000604624 HERC1Q15751 4861 aa2.12□□□□□ -2.07
KCNMA1-223ENST00000604624 DNAH3Q8TD57 4116 aa2.12□□□□□ -2.07
KCNMA1-223ENST00000604624 EPPK1P58107 5090 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms