RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 PRR26Q8N8Z3 221 aa11.55□□□□□ -0.56
ARHGEF1-218ENST00000599589 PLECQ15149 4684 aaKnown RBP11.53□□□□□ -0.56
ARHGEF1-218ENST00000599589 Q6ZRN7 208 aaPredicted RBP11.53□□□□□ -0.56
ARHGEF1-218ENST00000599589 LINC00483Q53H64 154 aa11.5□□□□□ -0.57
ARHGEF1-218ENST00000599589 DNAH7Q8WXX0 4024 aa11.49□□□□□ -0.57
ARHGEF1-218ENST00000599589 Q5W150 140 aa11.48□□□□□ -0.57
ARHGEF1-218ENST00000599589 ANAPC11Q9NYG5 84 aa11.47□□□□□ -0.57
ARHGEF1-218ENST00000599589 WWC2-AS2Q96NR7 200 aa11.47□□□□□ -0.57
ARHGEF1-218ENST00000599589 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.46□□□□□ -0.58
ARHGEF1-218ENST00000599589 PRKDCP78527 4128 aaKnown RBP11.44□□□□□ -0.58
ARHGEF1-218ENST00000599589 SPINK6Q6UWN8 80 aa11.41□□□□□ -0.58
ARHGEF1-218ENST00000599589 KRTAP13-3Q3SY46 172 aa11.41□□□□□ -0.58
ARHGEF1-218ENST00000599589 SPACA4Q8TDM5 124 aa11.4□□□□□ -0.58
ARHGEF1-218ENST00000599589 ALMS1Q8TCU4 4167 aa11.4□□□□□ -0.58
ARHGEF1-218ENST00000599589 STARD9Q9P2P6 4700 aa11.4□□□□□ -0.58
ARHGEF1-218ENST00000599589 ZNF706Q9Y5V0 76 aaPredicted RBP11.4□□□□□ -0.58
ARHGEF1-218ENST00000599589 VPS13DQ5THJ4 4388 aa11.39□□□□□ -0.59
ARHGEF1-218ENST00000599589 ACYP2P14621 99 aa11.39□□□□□ -0.59
ARHGEF1-218ENST00000599589 LINC00313P59037 77 aa11.39□□□□□ -0.59
ARHGEF1-218ENST00000599589 A0A087WTM6 91 aa11.38□□□□□ -0.59
ARHGEF1-218ENST00000599589 MEGF8Q7Z7M0 2845 aa11.38□□□□□ -0.59
ARHGEF1-218ENST00000599589 PRAC1Q96KF2 57 aa11.36□□□□□ -0.59
ARHGEF1-218ENST00000599589 PSORS1C2Q9UIG4 136 aa11.35□□□□□ -0.59
ARHGEF1-218ENST00000599589 DNHD1Q96M86 4753 aa11.34□□□□□ -0.59
ARHGEF1-218ENST00000599589 FRAS1Q86XX4 4008 aa11.33□□□□□ -0.6
ARHGEF1-218ENST00000599589 DNAH8Q96JB1 4490 aa11.31□□□□□ -0.6
ARHGEF1-218ENST00000599589 IGLV5-52A0A0A0MRZ9 124 aa11.3□□□□□ -0.6
ARHGEF1-218ENST00000599589 ADM2Q7Z4H4 148 aa11.3□□□□□ -0.6
ARHGEF1-218ENST00000599589 DMAC1Q96GE9 116 aa11.29□□□□□ -0.6
ARHGEF1-218ENST00000599589 RTL8CO15255 209 aa11.28□□□□□ -0.6
ARHGEF1-218ENST00000599589 ZNF861PO60384 105 aa11.27□□□□□ -0.6
ARHGEF1-218ENST00000599589 A0A1B0GU69 56 aa11.27□□□□□ -0.61
ARHGEF1-218ENST00000599589 C1orf134Q5TEV5 83 aa11.26□□□□□ -0.61
ARHGEF1-218ENST00000599589 CIRBP-AS1Q8TBR5 109 aa11.24□□□□□ -0.61
ARHGEF1-218ENST00000599589 RETNLBQ9BQ08 111 aa11.24□□□□□ -0.61
ARHGEF1-218ENST00000599589 C8orf87E5RJ46 101 aa11.24□□□□□ -0.61
ARHGEF1-218ENST00000599589 LY6G6CO95867 125 aa11.22□□□□□ -0.61
ARHGEF1-218ENST00000599589 PLA2G1BP04054 148 aaKnown RBP11.22□□□□□ -0.61
ARHGEF1-218ENST00000599589 SPATA8Q6RVD6 105 aa11.2□□□□□ -0.62
ARHGEF1-218ENST00000599589 KMT2AQ03164 3969 aa11.19□□□□□ -0.62
ARHGEF1-218ENST00000599589 HECTD4Q9Y4D8 3996 aa11.18□□□□□ -0.62
ARHGEF1-218ENST00000599589 DNAH2Q9P225 4427 aa11.17□□□□□ -0.62
ARHGEF1-218ENST00000599589 KRTAP21-3Q3LHN1 58 aa11.16□□□□□ -0.62
ARHGEF1-218ENST00000599589 FAM229AH3BQW9 127 aa11.14□□□□□ -0.63
ARHGEF1-218ENST00000599589 MIR22HGQ0VDD5 57 aa11.14□□□□□ -0.63
ARHGEF1-218ENST00000599589 FBN3Q75N90 2809 aa11.13□□□□□ -0.63
ARHGEF1-218ENST00000599589 IGKV2-30P06310 120 aa11.13□□□□□ -0.63
ARHGEF1-218ENST00000599589 DNAH17Q9UFH2 4485 aa11.13□□□□□ -0.63
ARHGEF1-218ENST00000599589 UQCR11O14957 56 aa11.1□□□□□ -0.63
ARHGEF1-218ENST00000599589 LINC01554Q52M75 96 aa11.09□□□□□ -0.63
ARHGEF1-218ENST00000599589 IGLV7-43P04211 117 aa11.08□□□□□ -0.64
ARHGEF1-218ENST00000599589 TGP01266 2768 aa11.07□□□□□ -0.64
ARHGEF1-218ENST00000599589 SSBP3-AS1Q7Z2R9 100 aa11.04□□□□□ -0.64
ARHGEF1-218ENST00000599589 DNAH6Q9C0G6 4158 aa11.02□□□□□ -0.65
ARHGEF1-218ENST00000599589 IGKV2D-30A0A075B6S6 120 aa11□□□□□ -0.65
ARHGEF1-218ENST00000599589 KRTAP10-2P60368 255 aa11□□□□□ -0.65
ARHGEF1-218ENST00000599589 KRTAP16-1A8MUX0 517 aa10.97□□□□□ -0.65
ARHGEF1-218ENST00000599589 CSAG1Q6PB30 78 aa10.95□□□□□ -0.66
ARHGEF1-218ENST00000599589 C4orf48Q5BLP8 95 aa10.94□□□□□ -0.66
ARHGEF1-218ENST00000599589 KRTAP13-2Q52LG2 175 aa10.89□□□□□ -0.67
ARHGEF1-218ENST00000599589 DNAH11Q96DT5 4516 aa10.87□□□□□ -0.67
ARHGEF1-218ENST00000599589 Q6ZSA8 131 aa10.87□□□□□ -0.67
ARHGEF1-218ENST00000599589 DNAH5Q8TE73 4624 aa10.87□□□□□ -0.67
ARHGEF1-218ENST00000599589 SPINK1P00995 79 aa10.87□□□□□ -0.67
ARHGEF1-218ENST00000599589 KRTAP10-1P60331 282 aa10.86□□□□□ -0.67
ARHGEF1-218ENST00000599589 HYDINQ4G0P3 5121 aa10.8□□□□□ -0.68
ARHGEF1-218ENST00000599589 Q8N1X5 172 aa10.79□□□□□ -0.68
ARHGEF1-218ENST00000599589 FAT2Q9NYQ8 4349 aa10.77□□□□□ -0.68
ARHGEF1-218ENST00000599589 PKD1P98161 4303 aa10.77□□□□□ -0.69
ARHGEF1-218ENST00000599589 H3BS24 57 aa10.72□□□□□ -0.69
ARHGEF1-218ENST00000599589 LRP1BQ9NZR2 4599 aa10.68□□□□□ -0.7
ARHGEF1-218ENST00000599589 H0YAA0 97 aa10.67□□□□□ -0.7
ARHGEF1-218ENST00000599589 KRTAP1-4P0C5Y4 121 aa10.65□□□□□ -0.7
ARHGEF1-218ENST00000599589 A8MUU9 505 aa10.64□□□□□ -0.71
ARHGEF1-218ENST00000599589 TYMSOSQ8TAI1 123 aa10.61□□□□□ -0.71
ARHGEF1-218ENST00000599589 SACSQ9NZJ4 4579 aa10.59□□□□□ -0.71
ARHGEF1-218ENST00000599589 LINC00304Q8N9R0 145 aa10.58□□□□□ -0.72
ARHGEF1-218ENST00000599589 KRTAP25-1Q3LHN0 102 aa10.55□□□□□ -0.72
ARHGEF1-218ENST00000599589 VPS13BQ7Z7G8 4022 aa10.53□□□□□ -0.72
ARHGEF1-218ENST00000599589 A0A1B0GU33 70 aa10.53□□□□□ -0.72
ARHGEF1-218ENST00000599589 A0A1B0GVY2 172 aa10.48□□□□□ -0.73
ARHGEF1-218ENST00000599589 H1FX-AS1Q4G0G2 97 aa10.47□□□□□ -0.73
ARHGEF1-218ENST00000599589 PKHD1P08F94 4074 aa10.47□□□□□ -0.73
ARHGEF1-218ENST00000599589 KRTAP3-1Q9BYR8 98 aa10.45□□□□□ -0.74
ARHGEF1-218ENST00000599589 SMR3BP02814 79 aaPredicted RBP10.42□□□□□ -0.74
ARHGEF1-218ENST00000599589 ROMO1P60602 79 aa10.4□□□□□ -0.74
ARHGEF1-218ENST00000599589 DYNC1H1Q14204 4646 aaKnown RBP10.4□□□□□ -0.75
ARHGEF1-218ENST00000599589 CRIPTQ9P021 101 aa10.38□□□□□ -0.75
ARHGEF1-218ENST00000599589 C9orf92A6NGG3 77 aa10.38□□□□□ -0.75
ARHGEF1-218ENST00000599589 FLG2Q5D862 2391 aaPredicted RBP10.38□□□□□ -0.75
ARHGEF1-218ENST00000599589 RPS29P62273 56 aaKnown RBP10.31□□□□□ -0.76
ARHGEF1-218ENST00000599589 C20orf166-AS1Q96NR2 134 aa10.3□□□□□ -0.76
ARHGEF1-218ENST00000599589 RYR2Q92736 4967 aa10.3□□□□□ -0.76
ARHGEF1-218ENST00000599589 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
ARHGEF1-218ENST00000599589 K7ERS5 55 aa10.28□□□□□ -0.76
ARHGEF1-218ENST00000599589 COX6B2Q6YFQ2 88 aa10.28□□□□□ -0.76
ARHGEF1-218ENST00000599589 APOBP04114 4563 aaKnown RBP10.27□□□□□ -0.77
ARHGEF1-218ENST00000599589 FAT1Q14517 4588 aa10.21□□□□□ -0.77
ARHGEF1-218ENST00000599589 KMT2CQ8NEZ4 4911 aaKnown RBP10.2□□□□□ -0.78
ARHGEF1-218ENST00000599589 P0C880 135 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms