RNA–Protein interactions for RNA: ENST00000586569.2

TNFRSF11A-202, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 8,147 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-202ENST00000586569 ITPR1Q14643 2758 aa7.82□□□□□ -1.16
TNFRSF11A-202ENST00000586569 KRTAP13-1Q8IUC0 172 aa7.82□□□□□ -1.16
TNFRSF11A-202ENST00000586569 DMXL2Q8TDJ6 3036 aa7.78□□□□□ -1.16
TNFRSF11A-202ENST00000586569 COL12A1Q99715 3063 aa7.75□□□□□ -1.17
TNFRSF11A-202ENST00000586569 LRBAP50851 2863 aa7.74□□□□□ -1.17
TNFRSF11A-202ENST00000586569 LAMA3Q16787 3333 aa7.72□□□□□ -1.17
TNFRSF11A-202ENST00000586569 HTTP42858 3142 aa7.72□□□□□ -1.17
TNFRSF11A-202ENST00000586569 XP32Q5T750 250 aa7.71□□□□□ -1.18
TNFRSF11A-202ENST00000586569 DNAH14Q0VDD8 3507 aa7.7□□□□□ -1.18
TNFRSF11A-202ENST00000586569 CHD9Q3L8U1 2897 aa7.7□□□□□ -1.18
TNFRSF11A-202ENST00000586569 BRCA2P51587 3418 aa7.68□□□□□ -1.18
TNFRSF11A-202ENST00000586569 CFAP47Q6ZTR5 3102 aa7.67□□□□□ -1.18
TNFRSF11A-202ENST00000586569 FRYLO94915 3013 aa7.67□□□□□ -1.18
TNFRSF11A-202ENST00000586569 LAMA1P25391 3075 aa7.62□□□□□ -1.19
TNFRSF11A-202ENST00000586569 HIVEP1P15822 2718 aa7.6□□□□□ -1.19
TNFRSF11A-202ENST00000586569 SPEGQ15772 3267 aa7.59□□□□□ -1.19
TNFRSF11A-202ENST00000586569 COL6A3P12111 3177 aa7.58□□□□□ -1.2
TNFRSF11A-202ENST00000586569 ATMQ13315 3056 aa7.54□□□□□ -1.2
TNFRSF11A-202ENST00000586569 VCANP13611 3396 aa7.51□□□□□ -1.21
TNFRSF11A-202ENST00000586569 KRTAP12-2P59991 146 aa7.5□□□□□ -1.21
TNFRSF11A-202ENST00000586569 TPRXLQ17RH7 258 aa7.49□□□□□ -1.21
TNFRSF11A-202ENST00000586569 BOD1L1Q8NFC6 3051 aa7.48□□□□□ -1.21
TNFRSF11A-202ENST00000586569 CDH23Q9H251 3354 aa7.45□□□□□ -1.22
TNFRSF11A-202ENST00000586569 TENM1Q9UKZ4 2725 aa7.43□□□□□ -1.22
TNFRSF11A-202ENST00000586569 KRTAP1-4P0C5Y4 121 aa7.43□□□□□ -1.22
TNFRSF11A-202ENST00000586569 ZZEF1O43149 2961 aa7.42□□□□□ -1.22
TNFRSF11A-202ENST00000586569 TENM3Q9P273 2699 aa7.41□□□□□ -1.22
TNFRSF11A-202ENST00000586569 CELSR2Q9HCU4 2923 aa7.41□□□□□ -1.22
TNFRSF11A-202ENST00000586569 TACC2O95359 2948 aa7.4□□□□□ -1.23
TNFRSF11A-202ENST00000586569 USP34Q70CQ2 3546 aa7.4□□□□□ -1.23
TNFRSF11A-202ENST00000586569 TGP01266 2768 aa7.38□□□□□ -1.23
TNFRSF11A-202ENST00000586569 NBEAQ8NFP9 2946 aa7.36□□□□□ -1.23
TNFRSF11A-202ENST00000586569 SZT2Q5T011 3432 aa7.34□□□□□ -1.23
TNFRSF11A-202ENST00000586569 ADGRG4Q8IZF6 3080 aa7.33□□□□□ -1.24
TNFRSF11A-202ENST00000586569 KRTAP13-4Q3LI77 160 aa7.31□□□□□ -1.24
TNFRSF11A-202ENST00000586569 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
TNFRSF11A-202ENST00000586569 KRTAP13-3Q3SY46 172 aa7.3□□□□□ -1.24
TNFRSF11A-202ENST00000586569 CELSR1Q9NYQ6 3014 aa7.29□□□□□ -1.24
TNFRSF11A-202ENST00000586569 NF1P21359 2839 aa7.29□□□□□ -1.24
TNFRSF11A-202ENST00000586569 DMXL1Q9Y485 3027 aa7.28□□□□□ -1.24
TNFRSF11A-202ENST00000586569 FLNCQ14315 2725 aa7.23□□□□□ -1.25
TNFRSF11A-202ENST00000586569 PDZD2O15018 2839 aa7.22□□□□□ -1.25
TNFRSF11A-202ENST00000586569 ZFHX4Q86UP3 3567 aa7.22□□□□□ -1.25
TNFRSF11A-202ENST00000586569 TNRC18O15417 2968 aaPredicted RBP7.2□□□□□ -1.26
TNFRSF11A-202ENST00000586569 NIPBLQ6KC79 2804 aaeCLIP7.19□□□□□ -1.26
TNFRSF11A-202ENST00000586569 DCHS2Q6V1P9 2916 aa7.18□□□□□ -1.26
TNFRSF11A-202ENST00000586569 KRTAP12-1P59990 96 aa7.16□□□□□ -1.26
TNFRSF11A-202ENST00000586569 WDFY3Q8IZQ1 3526 aa7.12□□□□□ -1.27
TNFRSF11A-202ENST00000586569 LOC400499M0QZD8 3231 aa7.12□□□□□ -1.27
TNFRSF11A-202ENST00000586569 KRTAP21-3Q3LHN1 58 aa7.1□□□□□ -1.27
TNFRSF11A-202ENST00000586569 TENM4Q6N022 2769 aa7.09□□□□□ -1.27
TNFRSF11A-202ENST00000586569 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
TNFRSF11A-202ENST00000586569 ASPMQ8IZT6 3477 aa7.07□□□□□ -1.28
TNFRSF11A-202ENST00000586569 INE1O15225 51 aa7.03□□□□□ -1.28
TNFRSF11A-202ENST00000586569 DCHS1Q96JQ0 3298 aa7.01□□□□□ -1.29
TNFRSF11A-202ENST00000586569 SPTBN5Q9NRC6 3674 aaKnown RBP6.99□□□□□ -1.29
TNFRSF11A-202ENST00000586569 NBPF19A0A087WUL8 3843 aa6.98□□□□□ -1.29
TNFRSF11A-202ENST00000586569 LAMA5O15230 3695 aa6.97□□□□□ -1.29
TNFRSF11A-202ENST00000586569 ZANQ9Y493 2812 aa6.96□□□□□ -1.29
TNFRSF11A-202ENST00000586569 EYSQ5T1H1 3165 aa6.96□□□□□ -1.3
TNFRSF11A-202ENST00000586569 VWFP04275 2813 aa6.95□□□□□ -1.3
TNFRSF11A-202ENST00000586569 MYO15AQ9UKN7 3530 aa6.94□□□□□ -1.3
TNFRSF11A-202ENST00000586569 FBN2P35556 2912 aa6.94□□□□□ -1.3
TNFRSF11A-202ENST00000586569 PKD1L1Q8TDX9 2849 aa6.92□□□□□ -1.3
TNFRSF11A-202ENST00000586569 SRRM2Q9UQ35 2752 aaKnown RBP6.87□□□□□ -1.31
TNFRSF11A-202ENST00000586569 TENM2Q9NT68 2774 aa6.87□□□□□ -1.31
TNFRSF11A-202ENST00000586569 SPENQ96T58 3664 aaKnown RBP6.79□□□□□ -1.32
TNFRSF11A-202ENST00000586569 HRNRQ86YZ3 2850 aaPredicted RBP6.76□□□□□ -1.33
TNFRSF11A-202ENST00000586569 RELNP78509 3460 aa6.75□□□□□ -1.33
TNFRSF11A-202ENST00000586569 CSMD1Q96PZ7 3565 aa6.75□□□□□ -1.33
TNFRSF11A-202ENST00000586569 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
TNFRSF11A-202ENST00000586569 KRTAP10-12P60413 245 aa6.73□□□□□ -1.33
TNFRSF11A-202ENST00000586569 MXRA5Q9NR99 2828 aa6.72□□□□□ -1.33
TNFRSF11A-202ENST00000586569 DMDP11532 3685 aa6.7□□□□□ -1.34
TNFRSF11A-202ENST00000586569 ZFHX3Q15911 3703 aa6.65□□□□□ -1.34
TNFRSF11A-202ENST00000586569 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
TNFRSF11A-202ENST00000586569 COL7A1Q02388 2944 aa6.63□□□□□ -1.35
TNFRSF11A-202ENST00000586569 SMG1Q96Q15 3661 aaKnown RBP6.62□□□□□ -1.35
TNFRSF11A-202ENST00000586569 MEGF8Q7Z7M0 2845 aa6.59□□□□□ -1.35
TNFRSF11A-202ENST00000586569 KRTAP10-5P60370 271 aa6.54□□□□□ -1.36
TNFRSF11A-202ENST00000586569 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
TNFRSF11A-202ENST00000586569 AKAP9Q99996 3911 aa6.46□□□□□ -1.37
TNFRSF11A-202ENST00000586569 VPS13CQ709C8 3753 aa6.42□□□□□ -1.38
TNFRSF11A-202ENST00000586569 FBN3Q75N90 2809 aa6.41□□□□□ -1.38
TNFRSF11A-202ENST00000586569 LCE3AQ5TA76 89 aa6.41□□□□□ -1.38
TNFRSF11A-202ENST00000586569 CUBNO60494 3623 aa6.37□□□□□ -1.39
TNFRSF11A-202ENST00000586569 KRTAP3-2Q9BYR7 98 aa6.29□□□□□ -1.4
TNFRSF11A-202ENST00000586569 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
TNFRSF11A-202ENST00000586569 MUC3AQ02505 3323 aa6.22□□□□□ -1.41
TNFRSF11A-202ENST00000586569 KRTAP23-1A1A580 65 aa6.21□□□□□ -1.42
TNFRSF11A-202ENST00000586569 KRTAP8-1Q8IUC2 63 aa6.21□□□□□ -1.42
TNFRSF11A-202ENST00000586569 SVEP1Q4LDE5 3571 aa6.19□□□□□ -1.42
TNFRSF11A-202ENST00000586569 FBN1P35555 2871 aaKnown RBP6.18□□□□□ -1.42
TNFRSF11A-202ENST00000586569 OTOGQ6ZRI0 2925 aa6.16□□□□□ -1.42
TNFRSF11A-202ENST00000586569 CSMD3Q7Z407 3707 aa6.13□□□□□ -1.43
TNFRSF11A-202ENST00000586569 BSNQ9UPA5 3926 aa6.1□□□□□ -1.43
TNFRSF11A-202ENST00000586569 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.43
TNFRSF11A-202ENST00000586569 TRRAPQ9Y4A5 3859 aa6.09□□□□□ -1.43
TNFRSF11A-202ENST00000586569 MT1HL1P0DM35 61 aa6.07□□□□□ -1.44
TNFRSF11A-202ENST00000586569 CMYA5Q8N3K9 4069 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms