RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 NBEAL2Q6ZNJ1 2754 aa8.85□□□□□ -0.99
CACNA1A-202ENST00000573710 KRTAP4-16G5E9R7 235 aaPredicted RBP8.85□□□□□ -0.99
CACNA1A-202ENST00000573710 ASB16-AS1Q495Z4 193 aa8.84□□□□□ -0.99
CACNA1A-202ENST00000573710 USP34Q70CQ2 3546 aa8.84□□□□□ -1
CACNA1A-202ENST00000573710 A6NN06 94 aa8.81□□□□□ -1
CACNA1A-202ENST00000573710 KRTAP10-10P60014 251 aa8.8□□□□□ -1
CACNA1A-202ENST00000573710 UTP20O75691 2785 aaKnown RBP8.79□□□□□ -1
CACNA1A-202ENST00000573710 CHD9Q3L8U1 2897 aa8.78□□□□□ -1
CACNA1A-202ENST00000573710 KRTAP11-1Q8IUC1 163 aa8.76□□□□□ -1.01
CACNA1A-202ENST00000573710 UBR5O95071 2799 aaPredicted RBP8.76□□□□□ -1.01
CACNA1A-202ENST00000573710 ZZEF1O43149 2961 aa8.75□□□□□ -1.01
CACNA1A-202ENST00000573710 ZFHX4Q86UP3 3567 aa8.75□□□□□ -1.01
CACNA1A-202ENST00000573710 LRBAP50851 2863 aa8.74□□□□□ -1.01
CACNA1A-202ENST00000573710 BOD1L1Q8NFC6 3051 aa8.73□□□□□ -1.01
CACNA1A-202ENST00000573710 WDFY3Q8IZQ1 3526 aa8.71□□□□□ -1.02
CACNA1A-202ENST00000573710 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
CACNA1A-202ENST00000573710 EYSQ5T1H1 3165 aa8.67□□□□□ -1.02
CACNA1A-202ENST00000573710 LOC400499M0QZD8 3231 aa8.67□□□□□ -1.02
CACNA1A-202ENST00000573710 FRYLO94915 3013 aa8.66□□□□□ -1.02
CACNA1A-202ENST00000573710 PRO2289Q9P1D8 64 aa8.64□□□□□ -1.03
CACNA1A-202ENST00000573710 KRTAP13-2Q52LG2 175 aa8.64□□□□□ -1.03
CACNA1A-202ENST00000573710 TNRC18O15417 2968 aaPredicted RBP8.61□□□□□ -1.03
CACNA1A-202ENST00000573710 ZNF292O60281 2723 aa8.61□□□□□ -1.03
CACNA1A-202ENST00000573710 DCHS1Q96JQ0 3298 aa8.61□□□□□ -1.03
CACNA1A-202ENST00000573710 PP632Q6XCG6 107 aa8.6□□□□□ -1.03
CACNA1A-202ENST00000573710 Q6ZRN7 208 aaPredicted RBP8.57□□□□□ -1.04
CACNA1A-202ENST00000573710 RPS29P62273 56 aaKnown RBP8.56□□□□□ -1.04
CACNA1A-202ENST00000573710 ADGRG4Q8IZF6 3080 aa8.52□□□□□ -1.05
CACNA1A-202ENST00000573710 ITPR1Q14643 2758 aa8.45□□□□□ -1.06
CACNA1A-202ENST00000573710 CELSR1Q9NYQ6 3014 aa8.45□□□□□ -1.06
CACNA1A-202ENST00000573710 DMXL1Q9Y485 3027 aa8.41□□□□□ -1.06
CACNA1A-202ENST00000573710 TACC2O95359 2948 aa8.4□□□□□ -1.07
CACNA1A-202ENST00000573710 HIVEP1P15822 2718 aa8.39□□□□□ -1.07
CACNA1A-202ENST00000573710 XP32Q5T750 250 aa8.39□□□□□ -1.07
CACNA1A-202ENST00000573710 LAMA5O15230 3695 aa8.38□□□□□ -1.07
CACNA1A-202ENST00000573710 NBPF19A0A087WUL8 3843 aa8.37□□□□□ -1.07
CACNA1A-202ENST00000573710 H0YAA0 97 aa8.35□□□□□ -1.07
CACNA1A-202ENST00000573710 CRCT1Q9UGL9 99 aa8.35□□□□□ -1.07
CACNA1A-202ENST00000573710 NBEAQ8NFP9 2946 aa8.34□□□□□ -1.07
CACNA1A-202ENST00000573710 KRTAP7-1Q8IUC3 87 aa8.33□□□□□ -1.08
CACNA1A-202ENST00000573710 KRTAP12-2P59991 146 aa8.3□□□□□ -1.08
CACNA1A-202ENST00000573710 TENM1Q9UKZ4 2725 aa8.27□□□□□ -1.09
CACNA1A-202ENST00000573710 RELNP78509 3460 aa8.27□□□□□ -1.09
CACNA1A-202ENST00000573710 CSMD1Q96PZ7 3565 aa8.2□□□□□ -1.1
CACNA1A-202ENST00000573710 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
CACNA1A-202ENST00000573710 TENM3Q9P273 2699 aa8.18□□□□□ -1.1
CACNA1A-202ENST00000573710 CELSR2Q9HCU4 2923 aa8.16□□□□□ -1.1
CACNA1A-202ENST00000573710 FLNCQ14315 2725 aa8.11□□□□□ -1.11
CACNA1A-202ENST00000573710 KRTAP15-1Q3LI76 137 aa8.09□□□□□ -1.11
CACNA1A-202ENST00000573710 TPRXLQ17RH7 258 aa8.09□□□□□ -1.11
CACNA1A-202ENST00000573710 NF1P21359 2839 aa8.08□□□□□ -1.12
CACNA1A-202ENST00000573710 PDZD2O15018 2839 aa8.06□□□□□ -1.12
CACNA1A-202ENST00000573710 TGP01266 2768 aa8□□□□□ -1.13
CACNA1A-202ENST00000573710 NIPBLQ6KC79 2804 aaeCLIP7.98□□□□□ -1.13
CACNA1A-202ENST00000573710 SPENQ96T58 3664 aaKnown RBP7.98□□□□□ -1.13
CACNA1A-202ENST00000573710 SMG1Q96Q15 3661 aaKnown RBP7.96□□□□□ -1.13
CACNA1A-202ENST00000573710 DCHS2Q6V1P9 2916 aa7.95□□□□□ -1.14
CACNA1A-202ENST00000573710 DMDP11532 3685 aa7.95□□□□□ -1.14
CACNA1A-202ENST00000573710 KRTAP1-4P0C5Y4 121 aa7.94□□□□□ -1.14
CACNA1A-202ENST00000573710 ZANQ9Y493 2812 aa7.91□□□□□ -1.14
CACNA1A-202ENST00000573710 VWFP04275 2813 aa7.9□□□□□ -1.15
CACNA1A-202ENST00000573710 CUBNO60494 3623 aa7.89□□□□□ -1.15
CACNA1A-202ENST00000573710 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
CACNA1A-202ENST00000573710 FBN2P35556 2912 aa7.85□□□□□ -1.15
CACNA1A-202ENST00000573710 TENM4Q6N022 2769 aa7.84□□□□□ -1.15
CACNA1A-202ENST00000573710 PKD1L1Q8TDX9 2849 aa7.83□□□□□ -1.16
CACNA1A-202ENST00000573710 SRRM2Q9UQ35 2752 aaKnown RBP7.8□□□□□ -1.16
CACNA1A-202ENST00000573710 SVEP1Q4LDE5 3571 aa7.79□□□□□ -1.16
CACNA1A-202ENST00000573710 KRTAP21-3Q3LHN1 58 aa7.77□□□□□ -1.17
CACNA1A-202ENST00000573710 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
CACNA1A-202ENST00000573710 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
CACNA1A-202ENST00000573710 HRNRQ86YZ3 2850 aaPredicted RBP7.7□□□□□ -1.18
CACNA1A-202ENST00000573710 TENM2Q9NT68 2774 aa7.67□□□□□ -1.18
CACNA1A-202ENST00000573710 MEGF8Q7Z7M0 2845 aa7.62□□□□□ -1.19
CACNA1A-202ENST00000573710 MUC3AQ02505 3323 aa7.62□□□□□ -1.19
CACNA1A-202ENST00000573710 KRTAP12-1P59990 96 aa7.59□□□□□ -1.19
CACNA1A-202ENST00000573710 CSMD2Q7Z408 3487 aa7.53□□□□□ -1.2
CACNA1A-202ENST00000573710 MXRA5Q9NR99 2828 aa7.5□□□□□ -1.21
CACNA1A-202ENST00000573710 KRTAP10-6P60371 365 aaPredicted RBP7.49□□□□□ -1.21
CACNA1A-202ENST00000573710 COL7A1Q02388 2944 aa7.48□□□□□ -1.21
CACNA1A-202ENST00000573710 CSMD3Q7Z407 3707 aa7.45□□□□□ -1.22
CACNA1A-202ENST00000573710 KRTAP10-5P60370 271 aa7.42□□□□□ -1.22
CACNA1A-202ENST00000573710 VPS13CQ709C8 3753 aa7.4□□□□□ -1.22
CACNA1A-202ENST00000573710 OTOGQ6ZRI0 2925 aa7.39□□□□□ -1.23
CACNA1A-202ENST00000573710 INE1O15225 51 aa7.37□□□□□ -1.23
CACNA1A-202ENST00000573710 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
CACNA1A-202ENST00000573710 BSNQ9UPA5 3926 aa7.33□□□□□ -1.24
CACNA1A-202ENST00000573710 TRRAPQ9Y4A5 3859 aa7.31□□□□□ -1.24
CACNA1A-202ENST00000573710 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
CACNA1A-202ENST00000573710 FBN1P35555 2871 aaKnown RBP7.09□□□□□ -1.28
CACNA1A-202ENST00000573710 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
CACNA1A-202ENST00000573710 ANK3Q12955 4377 aaKnown RBP7.07□□□□□ -1.28
CACNA1A-202ENST00000573710 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
CACNA1A-202ENST00000573710 AKAP9Q99996 3911 aa6.99□□□□□ -1.29
CACNA1A-202ENST00000573710 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
CACNA1A-202ENST00000573710 KRTAP8-1Q8IUC2 63 aa6.97□□□□□ -1.29
CACNA1A-202ENST00000573710 FBN3Q75N90 2809 aa6.97□□□□□ -1.29
CACNA1A-202ENST00000573710 KRTAP10-7P60409 375 aaPredicted RBP6.92□□□□□ -1.3
CACNA1A-202ENST00000573710 HUWE1Q7Z6Z7 4374 aaKnown RBP6.86□□□□□ -1.31
CACNA1A-202ENST00000573710 ZNF469Q96JG9 3925 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms