RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 NBEAL2Q6ZNJ1 2754 aa8.85□□□□□ -0.99
CACNA1A-202ENST00000573710 KRTAP4-16G5E9R7 235 aaPredicted RBP8.85□□□□□ -0.99
CACNA1A-202ENST00000573710 ASB16-AS1Q495Z4 193 aa8.84□□□□□ -0.99
CACNA1A-202ENST00000573710 USP34Q70CQ2 3546 aa8.84□□□□□ -1
CACNA1A-202ENST00000573710 A6NN06 94 aa8.81□□□□□ -1
CACNA1A-202ENST00000573710 KRTAP10-10P60014 251 aa8.8□□□□□ -1
CACNA1A-202ENST00000573710 UTP20O75691 2785 aaKnown RBP8.79□□□□□ -1
CACNA1A-202ENST00000573710 CHD9Q3L8U1 2897 aa8.78□□□□□ -1
CACNA1A-202ENST00000573710 KRTAP11-1Q8IUC1 163 aa8.76□□□□□ -1.01
CACNA1A-202ENST00000573710 UBR5O95071 2799 aaPredicted RBP8.76□□□□□ -1.01
CACNA1A-202ENST00000573710 ZZEF1O43149 2961 aa8.75□□□□□ -1.01
CACNA1A-202ENST00000573710 ZFHX4Q86UP3 3567 aa8.75□□□□□ -1.01
CACNA1A-202ENST00000573710 LRBAP50851 2863 aa8.74□□□□□ -1.01
CACNA1A-202ENST00000573710 BOD1L1Q8NFC6 3051 aa8.73□□□□□ -1.01
CACNA1A-202ENST00000573710 WDFY3Q8IZQ1 3526 aa8.71□□□□□ -1.02
CACNA1A-202ENST00000573710 KRTAP29-1A8MX34 341 aaPredicted RBP8.69□□□□□ -1.02
CACNA1A-202ENST00000573710 EYSQ5T1H1 3165 aa8.67□□□□□ -1.02
CACNA1A-202ENST00000573710 LOC400499M0QZD8 3231 aa8.67□□□□□ -1.02
CACNA1A-202ENST00000573710 FRYLO94915 3013 aa8.66□□□□□ -1.02
CACNA1A-202ENST00000573710 PRO2289Q9P1D8 64 aa8.64□□□□□ -1.03
CACNA1A-202ENST00000573710 KRTAP13-2Q52LG2 175 aa8.64□□□□□ -1.03
CACNA1A-202ENST00000573710 TNRC18O15417 2968 aaPredicted RBP8.61□□□□□ -1.03
CACNA1A-202ENST00000573710 ZNF292O60281 2723 aa8.61□□□□□ -1.03
CACNA1A-202ENST00000573710 DCHS1Q96JQ0 3298 aa8.61□□□□□ -1.03
CACNA1A-202ENST00000573710 PP632Q6XCG6 107 aa8.6□□□□□ -1.03
CACNA1A-202ENST00000573710 Q6ZRN7 208 aaPredicted RBP8.57□□□□□ -1.04
CACNA1A-202ENST00000573710 RPS29P62273 56 aaKnown RBP8.56□□□□□ -1.04
CACNA1A-202ENST00000573710 ADGRG4Q8IZF6 3080 aa8.52□□□□□ -1.05
CACNA1A-202ENST00000573710 ITPR1Q14643 2758 aa8.45□□□□□ -1.06
CACNA1A-202ENST00000573710 CELSR1Q9NYQ6 3014 aa8.45□□□□□ -1.06
CACNA1A-202ENST00000573710 DMXL1Q9Y485 3027 aa8.41□□□□□ -1.06
CACNA1A-202ENST00000573710 TACC2O95359 2948 aa8.4□□□□□ -1.07
CACNA1A-202ENST00000573710 HIVEP1P15822 2718 aa8.39□□□□□ -1.07
CACNA1A-202ENST00000573710 XP32Q5T750 250 aa8.39□□□□□ -1.07
CACNA1A-202ENST00000573710 LAMA5O15230 3695 aa8.38□□□□□ -1.07
CACNA1A-202ENST00000573710 NBPF19A0A087WUL8 3843 aa8.37□□□□□ -1.07
CACNA1A-202ENST00000573710 H0YAA0 97 aa8.35□□□□□ -1.07
CACNA1A-202ENST00000573710 CRCT1Q9UGL9 99 aa8.35□□□□□ -1.07
CACNA1A-202ENST00000573710 NBEAQ8NFP9 2946 aa8.34□□□□□ -1.07
CACNA1A-202ENST00000573710 KRTAP7-1Q8IUC3 87 aa8.33□□□□□ -1.08
CACNA1A-202ENST00000573710 KRTAP12-2P59991 146 aa8.3□□□□□ -1.08
CACNA1A-202ENST00000573710 TENM1Q9UKZ4 2725 aa8.27□□□□□ -1.09
CACNA1A-202ENST00000573710 RELNP78509 3460 aa8.27□□□□□ -1.09
CACNA1A-202ENST00000573710 CSMD1Q96PZ7 3565 aa8.2□□□□□ -1.1
CACNA1A-202ENST00000573710 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
CACNA1A-202ENST00000573710 TENM3Q9P273 2699 aa8.18□□□□□ -1.1
CACNA1A-202ENST00000573710 CELSR2Q9HCU4 2923 aa8.16□□□□□ -1.1
CACNA1A-202ENST00000573710 FLNCQ14315 2725 aa8.11□□□□□ -1.11
CACNA1A-202ENST00000573710 KRTAP15-1Q3LI76 137 aa8.09□□□□□ -1.11
CACNA1A-202ENST00000573710 TPRXLQ17RH7 258 aa8.09□□□□□ -1.11
CACNA1A-202ENST00000573710 NF1P21359 2839 aa8.08□□□□□ -1.12
CACNA1A-202ENST00000573710 PDZD2O15018 2839 aa8.06□□□□□ -1.12
CACNA1A-202ENST00000573710 TGP01266 2768 aa8□□□□□ -1.13
CACNA1A-202ENST00000573710 NIPBLQ6KC79 2804 aaeCLIP7.98□□□□□ -1.13
CACNA1A-202ENST00000573710 SPENQ96T58 3664 aaKnown RBP7.98□□□□□ -1.13
CACNA1A-202ENST00000573710 SMG1Q96Q15 3661 aaKnown RBP7.96□□□□□ -1.13
CACNA1A-202ENST00000573710 DCHS2Q6V1P9 2916 aa7.95□□□□□ -1.14
CACNA1A-202ENST00000573710 DMDP11532 3685 aa7.95□□□□□ -1.14
CACNA1A-202ENST00000573710 KRTAP1-4P0C5Y4 121 aa7.94□□□□□ -1.14
CACNA1A-202ENST00000573710 ZANQ9Y493 2812 aa7.91□□□□□ -1.14
CACNA1A-202ENST00000573710 VWFP04275 2813 aa7.9□□□□□ -1.15
CACNA1A-202ENST00000573710 CUBNO60494 3623 aa7.89□□□□□ -1.15
CACNA1A-202ENST00000573710 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
CACNA1A-202ENST00000573710 FBN2P35556 2912 aa7.85□□□□□ -1.15
CACNA1A-202ENST00000573710 TENM4Q6N022 2769 aa7.84□□□□□ -1.15
CACNA1A-202ENST00000573710 PKD1L1Q8TDX9 2849 aa7.83□□□□□ -1.16
CACNA1A-202ENST00000573710 SRRM2Q9UQ35 2752 aaKnown RBP7.8□□□□□ -1.16
CACNA1A-202ENST00000573710 SVEP1Q4LDE5 3571 aa7.79□□□□□ -1.16
CACNA1A-202ENST00000573710 KRTAP21-3Q3LHN1 58 aa7.77□□□□□ -1.17
CACNA1A-202ENST00000573710 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
CACNA1A-202ENST00000573710 KRTAP13-4Q3LI77 160 aa7.75□□□□□ -1.17
CACNA1A-202ENST00000573710 HRNRQ86YZ3 2850 aaPredicted RBP7.7□□□□□ -1.18
CACNA1A-202ENST00000573710 TENM2Q9NT68 2774 aa7.67□□□□□ -1.18
CACNA1A-202ENST00000573710 MEGF8Q7Z7M0 2845 aa7.62□□□□□ -1.19
CACNA1A-202ENST00000573710 MUC3AQ02505 3323 aa7.62□□□□□ -1.19
CACNA1A-202ENST00000573710 KRTAP12-1P59990 96 aa7.59□□□□□ -1.19
CACNA1A-202ENST00000573710 CSMD2Q7Z408 3487 aa7.53□□□□□ -1.2
CACNA1A-202ENST00000573710 MXRA5Q9NR99 2828 aa7.5□□□□□ -1.21
CACNA1A-202ENST00000573710 KRTAP10-6P60371 365 aaPredicted RBP7.49□□□□□ -1.21
CACNA1A-202ENST00000573710 COL7A1Q02388 2944 aa7.48□□□□□ -1.21
CACNA1A-202ENST00000573710 CSMD3Q7Z407 3707 aa7.45□□□□□ -1.22
CACNA1A-202ENST00000573710 KRTAP10-5P60370 271 aa7.42□□□□□ -1.22
CACNA1A-202ENST00000573710 VPS13CQ709C8 3753 aa7.4□□□□□ -1.22
CACNA1A-202ENST00000573710 OTOGQ6ZRI0 2925 aa7.39□□□□□ -1.23
CACNA1A-202ENST00000573710 INE1O15225 51 aa7.37□□□□□ -1.23
CACNA1A-202ENST00000573710 KRTAP10-12P60413 245 aa7.34□□□□□ -1.23
CACNA1A-202ENST00000573710 BSNQ9UPA5 3926 aa7.33□□□□□ -1.24
CACNA1A-202ENST00000573710 TRRAPQ9Y4A5 3859 aa7.31□□□□□ -1.24
CACNA1A-202ENST00000573710 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
CACNA1A-202ENST00000573710 FBN1P35555 2871 aaKnown RBP7.09□□□□□ -1.28
CACNA1A-202ENST00000573710 KRTAP3-1Q9BYR8 98 aa7.08□□□□□ -1.28
CACNA1A-202ENST00000573710 ANK3Q12955 4377 aaKnown RBP7.07□□□□□ -1.28
CACNA1A-202ENST00000573710 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
CACNA1A-202ENST00000573710 AKAP9Q99996 3911 aa6.99□□□□□ -1.29
CACNA1A-202ENST00000573710 LCE3AQ5TA76 89 aa6.99□□□□□ -1.29
CACNA1A-202ENST00000573710 KRTAP8-1Q8IUC2 63 aa6.97□□□□□ -1.29
CACNA1A-202ENST00000573710 FBN3Q75N90 2809 aa6.97□□□□□ -1.29
CACNA1A-202ENST00000573710 KRTAP10-7P60409 375 aaPredicted RBP6.92□□□□□ -1.3
CACNA1A-202ENST00000573710 HUWE1Q7Z6Z7 4374 aaKnown RBP6.86□□□□□ -1.31
CACNA1A-202ENST00000573710 ZNF469Q96JG9 3925 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms