RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.97
CACNA1A-202ENST00000573710 EHMT2Q96KQ7 1210 aa26■■□□□ 1.75
CACNA1A-202ENST00000573710 PELP1Q8IZL8 1130 aaKnown RBP25.88■■□□□ 1.73
CACNA1A-202ENST00000573710 ERICH6Q7L0X2 663 aa25.53■■□□□ 1.68
CACNA1A-202ENST00000573710 MYT1Q01538 1121 aa25.46■■□□□ 1.67
CACNA1A-202ENST00000573710 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
CACNA1A-202ENST00000573710 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
CACNA1A-202ENST00000573710 APLP2Q06481 763 aa24.81■■□□□ 1.56
CACNA1A-202ENST00000573710 CCER1Q8TC90 406 aaPredicted RBP24.73■■□□□ 1.55
CACNA1A-202ENST00000573710 RANGAP1P46060 587 aaPredicted RBP24.65■■□□□ 1.54
CACNA1A-202ENST00000573710 FAM9AQ8IZU1 332 aaPredicted RBP24.62■■□□□ 1.53
CACNA1A-202ENST00000573710 ATP1B4Q9UN42 357 aaPredicted RBP24.54■■□□□ 1.52
CACNA1A-202ENST00000573710 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
CACNA1A-202ENST00000573710 PCGF6Q9BYE7 350 aa24.22■■□□□ 1.47
CACNA1A-202ENST00000573710 YTHDC1Q96MU7 727 aaKnown RBP24.21■■□□□ 1.47
CACNA1A-202ENST00000573710 DAXXQ9UER7 740 aaPredicted RBP24.13■■□□□ 1.45
CACNA1A-202ENST00000573710 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
CACNA1A-202ENST00000573710 NEFLP07196 543 aa24.05■■□□□ 1.44
CACNA1A-202ENST00000573710 MYT1LQ9UL68 1186 aa23.99■■□□□ 1.43
CACNA1A-202ENST00000573710 CNGB1Q14028 1251 aaPredicted RBP23.98■■□□□ 1.43
CACNA1A-202ENST00000573710 CENPBP07199 599 aaPredicted RBP23.97■■□□□ 1.43
CACNA1A-202ENST00000573710 POLR3GLQ9BT43 218 aa23.87■■□□□ 1.41
CACNA1A-202ENST00000573710 SLC4A1APQ9BWU0 796 aaKnown RBP23.73■■□□□ 1.39
CACNA1A-202ENST00000573710 BCL11AQ9H165 835 aa23.53■■□□□ 1.36
CACNA1A-202ENST00000573710 ZNF316A6NFI3 1004 aaPredicted RBP23.47■■□□□ 1.35
CACNA1A-202ENST00000573710 CLSPNQ9HAW4 1339 aa23.43■■□□□ 1.34
CACNA1A-202ENST00000573710 PPARGC1BQ86YN6 1023 aaKnown RBP23.36■■□□□ 1.33
CACNA1A-202ENST00000573710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.36■■□□□ 1.33
CACNA1A-202ENST00000573710 HNRNPUL2Q1KMD3 747 aaKnown RBP23.36■■□□□ 1.33
CACNA1A-202ENST00000573710 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
CACNA1A-202ENST00000573710 SLC24A1O60721 1099 aa23.28■■□□□ 1.32
CACNA1A-202ENST00000573710 ITGAEP38570 1179 aa23.25■■□□□ 1.31
CACNA1A-202ENST00000573710 RTL5Q5HYW3 569 aaPredicted RBP23.18■■□□□ 1.3
CACNA1A-202ENST00000573710 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
CACNA1A-202ENST00000573710 ZEB1P37275 1124 aaPredicted RBP22.91■■□□□ 1.26
CACNA1A-202ENST00000573710 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
CACNA1A-202ENST00000573710 ZBTB47Q9UFB7 747 aaPredicted RBP22.76■■□□□ 1.23
CACNA1A-202ENST00000573710 EIF5BO60841 1220 aaKnown RBP22.7■■□□□ 1.22
CACNA1A-202ENST00000573710 BCANQ96GW7 911 aa22.69■■□□□ 1.22
CACNA1A-202ENST00000573710 PLPPR3Q6T4P5 718 aa22.58■■□□□ 1.21
CACNA1A-202ENST00000573710 CANXP27824 592 aaKnown RBP22.42■■□□□ 1.18
CACNA1A-202ENST00000573710 TULP1O00294 542 aaPredicted RBP22.39■■□□□ 1.18
CACNA1A-202ENST00000573710 ZNF326Q5BKZ1 582 aaKnown RBP22.39■■□□□ 1.17
CACNA1A-202ENST00000573710 ARXQ96QS3 562 aa22.38■■□□□ 1.17
CACNA1A-202ENST00000573710 NCBP3Q53F19 620 aaKnown RBP22.34■■□□□ 1.17
CACNA1A-202ENST00000573710 NPM2Q86SE8 214 aaKnown RBP22.33■■□□□ 1.17
CACNA1A-202ENST00000573710 TRIM52Q96A61 297 aa22.3■■□□□ 1.16
CACNA1A-202ENST00000573710 A0A0G2JS52 829 aa22.27■■□□□ 1.16
CACNA1A-202ENST00000573710 NEUROD1Q13562 356 aa22.22■■□□□ 1.15
CACNA1A-202ENST00000573710 FAM50AQ14320 339 aaKnown RBP22.22■■□□□ 1.15
CACNA1A-202ENST00000573710 CDK11BP21127 795 aaKnown RBP22.18■■□□□ 1.14
CACNA1A-202ENST00000573710 CDK11AQ9UQ88 783 aaPredicted RBP22.18■■□□□ 1.14
CACNA1A-202ENST00000573710 HSP90AA1P07900 732 aaKnown RBP22.17■■□□□ 1.14
CACNA1A-202ENST00000573710 ANP32BQ92688 251 aaKnown RBP22.16■■□□□ 1.14
CACNA1A-202ENST00000573710 NEFMP07197 916 aa22.15■■□□□ 1.14
CACNA1A-202ENST00000573710 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
CACNA1A-202ENST00000573710 PLEKHG5O94827 1062 aa22.07■■□□□ 1.12
CACNA1A-202ENST00000573710 HRCP23327 699 aa22.01■■□□□ 1.11
CACNA1A-202ENST00000573710 FBLN2P98095 1184 aa22■■□□□ 1.11
CACNA1A-202ENST00000573710 AMER1Q5JTC6 1135 aaPredicted RBP21.92■■□□□ 1.1
CACNA1A-202ENST00000573710 TRIM26Q12899 539 aaPredicted RBP21.92■■□□□ 1.1
CACNA1A-202ENST00000573710 GLIPR1L2Q4G1C9 344 aa21.91■■□□□ 1.1
CACNA1A-202ENST00000573710 TPRNQ4KMQ1 711 aa21.88■■□□□ 1.09
CACNA1A-202ENST00000573710 ANP32AP39687 249 aaKnown RBP21.87■■□□□ 1.09
CACNA1A-202ENST00000573710 ARID3CA6NKF2 412 aa21.85■■□□□ 1.09
CACNA1A-202ENST00000573710 NBR1Q14596 966 aa21.84■■□□□ 1.09
CACNA1A-202ENST00000573710 DIEXFQ68CQ4 756 aaKnown RBP21.83■■□□□ 1.09
CACNA1A-202ENST00000573710 ESF1Q9H501 851 aaKnown RBP21.82■■□□□ 1.08
CACNA1A-202ENST00000573710 TAOK2Q9UL54 1235 aa21.8■■□□□ 1.08
CACNA1A-202ENST00000573710 ZBTB7CA1YPR0 619 aa21.78■■□□□ 1.08
CACNA1A-202ENST00000573710 STAG3Q9UJ98 1225 aa21.78■■□□□ 1.08
CACNA1A-202ENST00000573710 SENP3Q9H4L4 574 aaPredicted RBP21.78■■□□□ 1.08
CACNA1A-202ENST00000573710 ANP32CO43423 234 aa21.77■■□□□ 1.07
CACNA1A-202ENST00000573710 CHGAP10645 457 aaKnown RBP21.75■■□□□ 1.07
CACNA1A-202ENST00000573710 LOC105371045A0A1W2PR82 267 aa21.74■■□□□ 1.07
CACNA1A-202ENST00000573710 SALL2Q9Y467 1007 aaPredicted RBP21.71■■□□□ 1.07
CACNA1A-202ENST00000573710 GTF3C3Q9Y5Q9 886 aa21.7■■□□□ 1.06
CACNA1A-202ENST00000573710 ZNF777Q9ULD5 760 aaPredicted RBP21.56■■□□□ 1.04
CACNA1A-202ENST00000573710 UPF2Q9HAU5 1272 aaKnown RBP21.56■■□□□ 1.04
CACNA1A-202ENST00000573710 C14orf37Q86TY3 774 aa21.52■■□□□ 1.03
CACNA1A-202ENST00000573710 PRM3Q9NNZ6 103 aa21.49■■□□□ 1.03
CACNA1A-202ENST00000573710 CLSTN1O94985 981 aa21.49■■□□□ 1.03
CACNA1A-202ENST00000573710 DNTTIP2Q5QJE6 756 aaKnown RBP21.4■■□□□ 1.02
CACNA1A-202ENST00000573710 P3H3Q8IVL6 736 aa21.39■■□□□ 1.02
CACNA1A-202ENST00000573710 NPHP1O15259 732 aa21.37■■□□□ 1.01
CACNA1A-202ENST00000573710 HAP1P54257 671 aaPredicted RBP21.36■■□□□ 1.01
CACNA1A-202ENST00000573710 TNNT2P45379 298 aaPredicted RBP21.35■■□□□ 1.01
CACNA1A-202ENST00000573710 NCLP19338 710 aaKnown RBP21.35■■□□□ 1.01
CACNA1A-202ENST00000573710 TRIM44Q96DX7 344 aaPredicted RBP21.3■■□□□ 1
CACNA1A-202ENST00000573710 ANO8Q9HCE9 1232 aaPredicted RBP21.29■■□□□ 1
CACNA1A-202ENST00000573710 FBXO3Q9UK99 471 aa21.29■■□□□ 1
CACNA1A-202ENST00000573710 PTMAP06454 111 aaKnown RBP21.27■□□□□ 0.99
CACNA1A-202ENST00000573710 ZRSR1Q15695 479 aaKnown RBP21.26■□□□□ 0.99
CACNA1A-202ENST00000573710 FAM9BQ8IZU0 186 aa21.26■□□□□ 0.99
CACNA1A-202ENST00000573710 PLCB2Q00722 1185 aa21.25■□□□□ 0.99
CACNA1A-202ENST00000573710 FKBP8Q14318 412 aa21.25■□□□□ 0.99
CACNA1A-202ENST00000573710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.22■□□□□ 0.99
CACNA1A-202ENST00000573710 PDE4CQ08493 712 aa21.21■□□□□ 0.99
CACNA1A-202ENST00000573710 RTN4Q9NQC3 1192 aaKnown RBP21.19■□□□□ 0.98
CACNA1A-202ENST00000573710 MYH16Q9H6N6 1097 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms