RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-231ENST00000564288 XIRP2A4UGR9 3374 aa2.5□□□□□ -2.01
MACF1-231ENST00000564288 A0A087WTM6 91 aa2.5□□□□□ -2.01
MACF1-231ENST00000564288 KRTAP10-9P60411 292 aa2.5□□□□□ -2.01
MACF1-231ENST00000564288 PLAC4Q8WY50 150 aa2.49□□□□□ -2.01
MACF1-231ENST00000564288 K7EIL1 84 aa2.49□□□□□ -2.01
MACF1-231ENST00000564288 WWC2-AS2Q96NR7 200 aa2.49□□□□□ -2.01
MACF1-231ENST00000564288 A0A0D9SG42 100 aa2.48□□□□□ -2.01
MACF1-231ENST00000564288 Q6ZSA8 131 aa2.47□□□□□ -2.01
MACF1-231ENST00000564288 KRTAP1-3Q8IUG1 177 aa2.47□□□□□ -2.01
MACF1-231ENST00000564288 UNC80Q8N2C7 3258 aa2.47□□□□□ -2.01
MACF1-231ENST00000564288 KRTAP13-1Q8IUC0 172 aa2.46□□□□□ -2.02
MACF1-231ENST00000564288 CASC10Q5T4H9 136 aa2.46□□□□□ -2.02
MACF1-231ENST00000564288 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.45□□□□□ -2.02
MACF1-231ENST00000564288 VCANP13611 3396 aa2.45□□□□□ -2.02
MACF1-231ENST00000564288 KRTAP1-1Q07627 177 aa2.45□□□□□ -2.02
MACF1-231ENST00000564288 COL6A3P12111 3177 aa2.44□□□□□ -2.02
MACF1-231ENST00000564288 KRTAP10-11P60412 298 aa2.44□□□□□ -2.02
MACF1-231ENST00000564288 KRTAP10-3P60369 221 aa2.44□□□□□ -2.02
MACF1-231ENST00000564288 EYSQ5T1H1 3165 aa2.43□□□□□ -2.02
MACF1-231ENST00000564288 MEGF8Q7Z7M0 2845 aa2.42□□□□□ -2.02
MACF1-231ENST00000564288 COL7A1Q02388 2944 aa2.41□□□□□ -2.02
MACF1-231ENST00000564288 KRTAP7-1Q8IUC3 87 aa2.41□□□□□ -2.02
MACF1-231ENST00000564288 KRTAP21-3Q3LHN1 58 aa2.41□□□□□ -2.02
MACF1-231ENST00000564288 SMR3AQ99954 134 aa2.4□□□□□ -2.03
MACF1-231ENST00000564288 KRTAP24-1Q3LI83 254 aa2.39□□□□□ -2.03
MACF1-231ENST00000564288 OTOGQ6ZRI0 2925 aa2.39□□□□□ -2.03
MACF1-231ENST00000564288 S4R3F8 94 aa2.38□□□□□ -2.03
MACF1-231ENST00000564288 C9orf92A6NGG3 77 aa2.38□□□□□ -2.03
MACF1-231ENST00000564288 H0YAA0 97 aa2.37□□□□□ -2.03
MACF1-231ENST00000564288 P0C880 135 aa2.37□□□□□ -2.03
MACF1-231ENST00000564288 BRCA2P51587 3418 aa2.37□□□□□ -2.03
MACF1-231ENST00000564288 Q6ZRN7 208 aaPredicted RBP2.35□□□□□ -2.03
MACF1-231ENST00000564288 KRTAP13-3Q3SY46 172 aa2.35□□□□□ -2.03
MACF1-231ENST00000564288 LOC400499M0QZD8 3231 aa2.33□□□□□ -2.04
MACF1-231ENST00000564288 KRTAP23-1A1A580 65 aa2.32□□□□□ -2.04
MACF1-231ENST00000564288 KRTAP15-1Q3LI76 137 aa2.32□□□□□ -2.04
MACF1-231ENST00000564288 R4GN34 69 aa2.32□□□□□ -2.04
MACF1-231ENST00000564288 CDH23Q9H251 3354 aa2.31□□□□□ -2.04
MACF1-231ENST00000564288 TNP1P09430 55 aa2.3□□□□□ -2.04
MACF1-231ENST00000564288 CELSR3Q9NYQ7 3312 aa2.29□□□□□ -2.04
MACF1-231ENST00000564288 USP34Q70CQ2 3546 aa2.28□□□□□ -2.04
MACF1-231ENST00000564288 DCHS1Q96JQ0 3298 aa2.27□□□□□ -2.05
MACF1-231ENST00000564288 SZT2Q5T011 3432 aa2.27□□□□□ -2.05
MACF1-231ENST00000564288 TPRXLQ17RH7 258 aa2.26□□□□□ -2.05
MACF1-231ENST00000564288 KRTAP1-5Q9BYS1 174 aa2.26□□□□□ -2.05
MACF1-231ENST00000564288 INE1O15225 51 aa2.26□□□□□ -2.05
MACF1-231ENST00000564288 FBN3Q75N90 2809 aa2.25□□□□□ -2.05
MACF1-231ENST00000564288 J3QL48 77 aa2.24□□□□□ -2.05
MACF1-231ENST00000564288 MYO15AQ9UKN7 3530 aa2.24□□□□□ -2.05
MACF1-231ENST00000564288 KRTAP13-2Q52LG2 175 aa2.22□□□□□ -2.05
MACF1-231ENST00000564288 Q5VSD8 79 aa2.22□□□□□ -2.05
MACF1-231ENST00000564288 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
MACF1-231ENST00000564288 DNAH14Q0VDD8 3507 aa2.21□□□□□ -2.06
MACF1-231ENST00000564288 SPEGQ15772 3267 aa2.21□□□□□ -2.06
MACF1-231ENST00000564288 KRTAP10-1P60331 282 aa2.21□□□□□ -2.06
MACF1-231ENST00000564288 KRTAP19-4Q3LI73 84 aa2.21□□□□□ -2.06
MACF1-231ENST00000564288 KRTAP10-8P60410 259 aa2.2□□□□□ -2.06
MACF1-231ENST00000564288 PRO2289Q9P1D8 64 aa2.2□□□□□ -2.06
MACF1-231ENST00000564288 XP32Q5T750 250 aa2.19□□□□□ -2.06
MACF1-231ENST00000564288 KRTAP3-1Q9BYR8 98 aa2.19□□□□□ -2.06
MACF1-231ENST00000564288 SMR3BP02814 79 aaPredicted RBP2.18□□□□□ -2.06
MACF1-231ENST00000564288 KRTAP1-4P0C5Y4 121 aa2.18□□□□□ -2.06
MACF1-231ENST00000564288 KRTAP10-6P60371 365 aaPredicted RBP2.16□□□□□ -2.06
MACF1-231ENST00000564288 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
MACF1-231ENST00000564288 M0R2T5 61 aa2.14□□□□□ -2.07
MACF1-231ENST00000564288 KRTAP13-4Q3LI77 160 aa2.14□□□□□ -2.07
MACF1-231ENST00000564288 KRTAP10-2P60368 255 aa2.13□□□□□ -2.07
MACF1-231ENST00000564288 KRTAP12-2P59991 146 aa2.12□□□□□ -2.07
MACF1-231ENST00000564288 KRTAP3-2Q9BYR7 98 aa2.11□□□□□ -2.07
MACF1-231ENST00000564288 ZFHX4Q86UP3 3567 aa2.1□□□□□ -2.07
MACF1-231ENST00000564288 ZFHX3Q15911 3703 aa2.1□□□□□ -2.07
MACF1-231ENST00000564288 TRRAPQ9Y4A5 3859 aa2.05□□□□□ -2.08
MACF1-231ENST00000564288 SPTBN5Q9NRC6 3674 aaKnown RBP2.04□□□□□ -2.08
MACF1-231ENST00000564288 MUC3AQ02505 3323 aa2.03□□□□□ -2.08
MACF1-231ENST00000564288 KRTAP3-3Q9BYR6 98 aa2.02□□□□□ -2.09
MACF1-231ENST00000564288 AKAP9Q99996 3911 aa2□□□□□ -2.09
MACF1-231ENST00000564288 LAMA5O15230 3695 aa2□□□□□ -2.09
MACF1-231ENST00000564288 RELNP78509 3460 aa1.97□□□□□ -2.09
MACF1-231ENST00000564288 SMG1Q96Q15 3661 aaKnown RBP1.96□□□□□ -2.1
MACF1-231ENST00000564288 ANK2Q01484 3957 aa1.95□□□□□ -2.1
MACF1-231ENST00000564288 A0A1B0GVY2 172 aa1.95□□□□□ -2.1
MACF1-231ENST00000564288 WDFY3Q8IZQ1 3526 aa1.94□□□□□ -2.1
MACF1-231ENST00000564288 NBPF19A0A087WUL8 3843 aa1.94□□□□□ -2.1
MACF1-231ENST00000564288 SPENQ96T58 3664 aaKnown RBP1.93□□□□□ -2.1
MACF1-231ENST00000564288 ASPMQ8IZT6 3477 aa1.92□□□□□ -2.1
MACF1-231ENST00000564288 CMYA5Q8N3K9 4069 aa1.87□□□□□ -2.11
MACF1-231ENST00000564288 CUBNO60494 3623 aa1.86□□□□□ -2.11
MACF1-231ENST00000564288 ZNF469Q96JG9 3925 aaPredicted RBP1.85□□□□□ -2.11
MACF1-231ENST00000564288 BSNQ9UPA5 3926 aa1.85□□□□□ -2.11
MACF1-231ENST00000564288 KRTAP10-4P60372 401 aaPredicted RBP1.83□□□□□ -2.12
MACF1-231ENST00000564288 SPRR5A0A1B0GTR4 108 aa1.83□□□□□ -2.12
MACF1-231ENST00000564288 CSMD2Q7Z408 3487 aa1.83□□□□□ -2.12
MACF1-231ENST00000564288 KRTAP10-10P60014 251 aa1.82□□□□□ -2.12
MACF1-231ENST00000564288 DNAH10Q8IVF4 4471 aa1.82□□□□□ -2.12
MACF1-231ENST00000564288 SVEP1Q4LDE5 3571 aa1.82□□□□□ -2.12
MACF1-231ENST00000564288 DNAH11Q96DT5 4516 aa1.81□□□□□ -2.12
MACF1-231ENST00000564288 ALMS1Q8TCU4 4167 aa1.81□□□□□ -2.12
MACF1-231ENST00000564288 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
MACF1-231ENST00000564288 SPRR2GQ9BYE4 73 aa1.8□□□□□ -2.12
MACF1-231ENST00000564288 DMDP11532 3685 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 208.3 ms