RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 A0A087X002 238 aa7.71□□□□□ -1.18
USB1-207ENST00000563149 NOTCH2NLQ7Z3S9 236 aa7.71□□□□□ -1.18
USB1-207ENST00000563149 CHKB-CPT1BH3BT56 60 aa7.7□□□□□ -1.18
USB1-207ENST00000563149 TENM2Q9NT68 2774 aa7.69□□□□□ -1.18
USB1-207ENST00000563149 LINC01558Q9Y6Z2 57 aa7.69□□□□□ -1.18
USB1-207ENST00000563149 DNAH8Q96JB1 4490 aa7.68□□□□□ -1.18
USB1-207ENST00000563149 KRTAP13-3Q3SY46 172 aa7.67□□□□□ -1.18
USB1-207ENST00000563149 CIRBP-AS1Q8TBR5 109 aa7.67□□□□□ -1.18
USB1-207ENST00000563149 HRES1P13985 223 aa7.66□□□□□ -1.18
USB1-207ENST00000563149 SPINK6Q6UWN8 80 aa7.66□□□□□ -1.18
USB1-207ENST00000563149 STARD9Q9P2P6 4700 aa7.66□□□□□ -1.18
USB1-207ENST00000563149 HECTD4Q9Y4D8 3996 aa7.65□□□□□ -1.19
USB1-207ENST00000563149 PRKDCP78527 4128 aaKnown RBP7.65□□□□□ -1.19
USB1-207ENST00000563149 PMAIP1Q13794 54 aa7.63□□□□□ -1.19
USB1-207ENST00000563149 Q5W150 140 aa7.63□□□□□ -1.19
USB1-207ENST00000563149 SPAG11AQ6PDA7 123 aa7.61□□□□□ -1.19
USB1-207ENST00000563149 A6NED7 52 aa7.6□□□□□ -1.19
USB1-207ENST00000563149 LINC00313P59037 77 aa7.6□□□□□ -1.19
USB1-207ENST00000563149 DNAH2Q9P225 4427 aa7.6□□□□□ -1.19
USB1-207ENST00000563149 ACYP2P14621 99 aa7.59□□□□□ -1.19
USB1-207ENST00000563149 FAM229AH3BQW9 127 aa7.59□□□□□ -1.2
USB1-207ENST00000563149 LY6G6CO95867 125 aa7.59□□□□□ -1.2
USB1-207ENST00000563149 ATP11AUNQ6ZP68 121 aa7.59□□□□□ -1.2
USB1-207ENST00000563149 CDC42SE1Q9NRR8 79 aa7.58□□□□□ -1.2
USB1-207ENST00000563149 LCA10Q71F78 164 aa7.57□□□□□ -1.2
USB1-207ENST00000563149 A8MU10 97 aa7.56□□□□□ -1.2
USB1-207ENST00000563149 J3QL48 77 aa7.56□□□□□ -1.2
USB1-207ENST00000563149 Q6ZSA8 131 aa7.54□□□□□ -1.2
USB1-207ENST00000563149 KRTAP10-2P60368 255 aa7.54□□□□□ -1.2
USB1-207ENST00000563149 KRTAP13-2Q52LG2 175 aa7.54□□□□□ -1.2
USB1-207ENST00000563149 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
USB1-207ENST00000563149 FRAS1Q86XX4 4008 aa7.53□□□□□ -1.2
USB1-207ENST00000563149 DNAH6Q9C0G6 4158 aa7.52□□□□□ -1.21
USB1-207ENST00000563149 IGKV2-30P06310 120 aa7.51□□□□□ -1.21
USB1-207ENST00000563149 KMT2AQ03164 3969 aa7.51□□□□□ -1.21
USB1-207ENST00000563149 KRTAP21-3Q3LHN1 58 aa7.51□□□□□ -1.21
USB1-207ENST00000563149 PRR26Q8N8Z3 221 aa7.5□□□□□ -1.21
USB1-207ENST00000563149 SPTSSBQ8NFR3 76 aa7.49□□□□□ -1.21
USB1-207ENST00000563149 KRTAP16-1A8MUX0 517 aa7.48□□□□□ -1.21
USB1-207ENST00000563149 ALMS1Q8TCU4 4167 aa7.48□□□□□ -1.21
USB1-207ENST00000563149 FBN3Q75N90 2809 aa7.47□□□□□ -1.21
USB1-207ENST00000563149 KRTAP10-1P60331 282 aa7.46□□□□□ -1.21
USB1-207ENST00000563149 KRTAP1-4P0C5Y4 121 aa7.46□□□□□ -1.22
USB1-207ENST00000563149 SPINK7P58062 85 aa7.46□□□□□ -1.22
USB1-207ENST00000563149 KRTAP3-3Q9BYR6 98 aa7.46□□□□□ -1.22
USB1-207ENST00000563149 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
USB1-207ENST00000563149 DNAH11Q96DT5 4516 aa7.45□□□□□ -1.22
USB1-207ENST00000563149 KTN1-AS1Q86SY8 53 aa7.45□□□□□ -1.22
USB1-207ENST00000563149 A6NN06 94 aa7.44□□□□□ -1.22
USB1-207ENST00000563149 DNAH5Q8TE73 4624 aa7.44□□□□□ -1.22
USB1-207ENST00000563149 SEC61GP60059 68 aa7.43□□□□□ -1.22
USB1-207ENST00000563149 RETNLBQ9BQ08 111 aa7.41□□□□□ -1.22
USB1-207ENST00000563149 SPINK1P00995 79 aa7.41□□□□□ -1.22
USB1-207ENST00000563149 MEGF8Q7Z7M0 2845 aa7.39□□□□□ -1.23
USB1-207ENST00000563149 LCE2DQ5TA82 110 aaPredicted RBP7.38□□□□□ -1.23
USB1-207ENST00000563149 TYMSOSQ8TAI1 123 aa7.38□□□□□ -1.23
USB1-207ENST00000563149 PLA2G1BP04054 148 aaKnown RBP7.37□□□□□ -1.23
USB1-207ENST00000563149 A0A1B0GU69 56 aa7.36□□□□□ -1.23
USB1-207ENST00000563149 RPS29P62273 56 aaKnown RBP7.36□□□□□ -1.23
USB1-207ENST00000563149 IGKV2D-30A0A075B6S6 120 aa7.33□□□□□ -1.24
USB1-207ENST00000563149 TGP01266 2768 aa7.33□□□□□ -1.24
USB1-207ENST00000563149 C7orf65Q6ZTY9 151 aa7.33□□□□□ -1.24
USB1-207ENST00000563149 PKD1P98161 4303 aa7.31□□□□□ -1.24
USB1-207ENST00000563149 LRP1BQ9NZR2 4599 aa7.31□□□□□ -1.24
USB1-207ENST00000563149 SPATA8Q6RVD6 105 aa7.3□□□□□ -1.24
USB1-207ENST00000563149 LINC00304Q8N9R0 145 aa7.28□□□□□ -1.24
USB1-207ENST00000563149 UQCR11O14957 56 aa7.27□□□□□ -1.25
USB1-207ENST00000563149 DNHD1Q96M86 4753 aa7.27□□□□□ -1.25
USB1-207ENST00000563149 FAT2Q9NYQ8 4349 aa7.25□□□□□ -1.25
USB1-207ENST00000563149 RBM12B-AS1Q9P1G2 102 aa7.23□□□□□ -1.25
USB1-207ENST00000563149 MIR22HGQ0VDD5 57 aa7.23□□□□□ -1.25
USB1-207ENST00000563149 SACSQ9NZJ4 4579 aa7.2□□□□□ -1.26
USB1-207ENST00000563149 VPS13BQ7Z7G8 4022 aa7.19□□□□□ -1.26
USB1-207ENST00000563149 A8MUU9 505 aa7.17□□□□□ -1.26
USB1-207ENST00000563149 C20orf166-AS1Q96NR2 134 aa7.17□□□□□ -1.26
USB1-207ENST00000563149 HYDINQ4G0P3 5121 aa7.15□□□□□ -1.26
USB1-207ENST00000563149 Q8N1X5 172 aa7.14□□□□□ -1.27
USB1-207ENST00000563149 SMR3BP02814 79 aaPredicted RBP7.08□□□□□ -1.28
USB1-207ENST00000563149 C9orf92A6NGG3 77 aa7.07□□□□□ -1.28
USB1-207ENST00000563149 KRTAP10-4P60372 401 aaPredicted RBP7.07□□□□□ -1.28
USB1-207ENST00000563149 A0A1B0GVY2 172 aa7.06□□□□□ -1.28
USB1-207ENST00000563149 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
USB1-207ENST00000563149 PKHD1L1Q86WI1 4243 aa7.01□□□□□ -1.29
USB1-207ENST00000563149 PRAC1Q96KF2 57 aa7.01□□□□□ -1.29
USB1-207ENST00000563149 DYNC1H1Q14204 4646 aaKnown RBP6.99□□□□□ -1.29
USB1-207ENST00000563149 ADM2Q7Z4H4 148 aa6.98□□□□□ -1.29
USB1-207ENST00000563149 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
USB1-207ENST00000563149 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.3
USB1-207ENST00000563149 A0A1B0GU33 70 aa6.95□□□□□ -1.3
USB1-207ENST00000563149 H0YAA0 97 aa6.94□□□□□ -1.3
USB1-207ENST00000563149 H1FX-AS1Q4G0G2 97 aa6.93□□□□□ -1.3
USB1-207ENST00000563149 PKHD1P08F94 4074 aa6.92□□□□□ -1.3
USB1-207ENST00000563149 LINC01554Q52M75 96 aa6.9□□□□□ -1.31
USB1-207ENST00000563149 FAT1Q14517 4588 aa6.85□□□□□ -1.31
USB1-207ENST00000563149 KRTAP10-8P60410 259 aa6.85□□□□□ -1.31
USB1-207ENST00000563149 CSAG1Q6PB30 78 aa6.85□□□□□ -1.31
USB1-207ENST00000563149 RPL37P61927 97 aaKnown RBP6.8□□□□□ -1.32
USB1-207ENST00000563149 K7ERS5 55 aa6.8□□□□□ -1.32
USB1-207ENST00000563149 FLG2Q5D862 2391 aaPredicted RBP6.78□□□□□ -1.32
USB1-207ENST00000563149 H3BS24 57 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms