RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 KMT2AQ03164 3969 aa9.82□□□□□ -0.84
SPG11-215ENST00000559193 LIMD2Q9BT23 127 aa9.8□□□□□ -0.84
SPG11-215ENST00000559193 FBN3Q75N90 2809 aa9.78□□□□□ -0.84
SPG11-215ENST00000559193 PRR15LQ9BU68 103 aa9.77□□□□□ -0.84
SPG11-215ENST00000559193 IGLV7-43P04211 117 aa9.77□□□□□ -0.85
SPG11-215ENST00000559193 SEC61GP60059 68 aa9.77□□□□□ -0.85
SPG11-215ENST00000559193 SPINK6Q6UWN8 80 aa9.75□□□□□ -0.85
SPG11-215ENST00000559193 A8MU10 97 aa9.75□□□□□ -0.85
SPG11-215ENST00000559193 PMAIP1Q13794 54 aa9.73□□□□□ -0.85
SPG11-215ENST00000559193 C1orf134Q5TEV5 83 aa9.73□□□□□ -0.85
SPG11-215ENST00000559193 CHKB-CPT1BH3BT56 60 aa9.73□□□□□ -0.85
SPG11-215ENST00000559193 CIRBP-AS1Q8TBR5 109 aa9.72□□□□□ -0.85
SPG11-215ENST00000559193 LOC101927531A0A1B0GV80 90 aa9.7□□□□□ -0.86
SPG11-215ENST00000559193 Q5W150 140 aa9.7□□□□□ -0.86
SPG11-215ENST00000559193 KRTAP13-3Q3SY46 172 aa9.7□□□□□ -0.86
SPG11-215ENST00000559193 HRES1P13985 223 aa9.69□□□□□ -0.86
SPG11-215ENST00000559193 ALMS1Q8TCU4 4167 aa9.69□□□□□ -0.86
SPG11-215ENST00000559193 Q75L30 129 aa9.69□□□□□ -0.86
SPG11-215ENST00000559193 MEGF8Q7Z7M0 2845 aa9.69□□□□□ -0.86
SPG11-215ENST00000559193 TGP01266 2768 aa9.66□□□□□ -0.86
SPG11-215ENST00000559193 SPAG11AQ6PDA7 123 aa9.65□□□□□ -0.86
SPG11-215ENST00000559193 DNAH11Q96DT5 4516 aa9.65□□□□□ -0.87
SPG11-215ENST00000559193 SSBP3-AS1Q7Z2R9 100 aa9.65□□□□□ -0.87
SPG11-215ENST00000559193 LINC01558Q9Y6Z2 57 aa9.64□□□□□ -0.87
SPG11-215ENST00000559193 DNAH6Q9C0G6 4158 aa9.63□□□□□ -0.87
SPG11-215ENST00000559193 DNAH5Q8TE73 4624 aa9.63□□□□□ -0.87
SPG11-215ENST00000559193 LY6G6CO95867 125 aa9.62□□□□□ -0.87
SPG11-215ENST00000559193 KRTAP10-2P60368 255 aa9.62□□□□□ -0.87
SPG11-215ENST00000559193 C8orf87E5RJ46 101 aa9.61□□□□□ -0.87
SPG11-215ENST00000559193 LCA10Q71F78 164 aa9.61□□□□□ -0.87
SPG11-215ENST00000559193 A6NED7 52 aa9.6□□□□□ -0.87
SPG11-215ENST00000559193 KRTAP13-2Q52LG2 175 aa9.57□□□□□ -0.88
SPG11-215ENST00000559193 LINC00313P59037 77 aa9.54□□□□□ -0.88
SPG11-215ENST00000559193 PRR26Q8N8Z3 221 aa9.53□□□□□ -0.88
SPG11-215ENST00000559193 SPTSSBQ8NFR3 76 aa9.52□□□□□ -0.89
SPG11-215ENST00000559193 CDC42SE1Q9NRR8 79 aa9.51□□□□□ -0.89
SPG11-215ENST00000559193 Q6ZSA8 131 aa9.5□□□□□ -0.89
SPG11-215ENST00000559193 LRP1BQ9NZR2 4599 aa9.5□□□□□ -0.89
SPG11-215ENST00000559193 FAM229AH3BQW9 127 aa9.5□□□□□ -0.89
SPG11-215ENST00000559193 ATP11AUNQ6ZP68 121 aa9.5□□□□□ -0.89
SPG11-215ENST00000559193 DNHD1Q96M86 4753 aa9.49□□□□□ -0.89
SPG11-215ENST00000559193 KRTAP10-1P60331 282 aa9.49□□□□□ -0.89
SPG11-215ENST00000559193 RETNLBQ9BQ08 111 aa9.49□□□□□ -0.89
SPG11-215ENST00000559193 ACYP2P14621 99 aa9.49□□□□□ -0.89
SPG11-215ENST00000559193 SPINK7P58062 85 aa9.48□□□□□ -0.89
SPG11-215ENST00000559193 DMAC1Q96GE9 116 aa9.48□□□□□ -0.89
SPG11-215ENST00000559193 KRTAP16-1A8MUX0 517 aa9.46□□□□□ -0.89
SPG11-215ENST00000559193 IGKV2-30P06310 120 aa9.45□□□□□ -0.9
SPG11-215ENST00000559193 KRTAP1-4P0C5Y4 121 aa9.45□□□□□ -0.9
SPG11-215ENST00000559193 PKD1P98161 4303 aa9.45□□□□□ -0.9
SPG11-215ENST00000559193 KTN1-AS1Q86SY8 53 aa9.43□□□□□ -0.9
SPG11-215ENST00000559193 FAT2Q9NYQ8 4349 aa9.42□□□□□ -0.9
SPG11-215ENST00000559193 A6NN06 94 aa9.4□□□□□ -0.9
SPG11-215ENST00000559193 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
SPG11-215ENST00000559193 VPS13BQ7Z7G8 4022 aa9.33□□□□□ -0.92
SPG11-215ENST00000559193 RBM12B-AS1Q9P1G2 102 aa9.32□□□□□ -0.92
SPG11-215ENST00000559193 IGKV2D-30A0A075B6S6 120 aa9.31□□□□□ -0.92
SPG11-215ENST00000559193 PLA2G1BP04054 148 aaKnown RBP9.3□□□□□ -0.92
SPG11-215ENST00000559193 TYMSOSQ8TAI1 123 aa9.29□□□□□ -0.92
SPG11-215ENST00000559193 C4orf48Q5BLP8 95 aa9.28□□□□□ -0.92
SPG11-215ENST00000559193 A0A1B0GU69 56 aa9.26□□□□□ -0.93
SPG11-215ENST00000559193 SPINK1P00995 79 aa9.26□□□□□ -0.93
SPG11-215ENST00000559193 C7orf65Q6ZTY9 151 aa9.22□□□□□ -0.93
SPG11-215ENST00000559193 LINC00304Q8N9R0 145 aa9.17□□□□□ -0.94
SPG11-215ENST00000559193 SPATA8Q6RVD6 105 aa9.15□□□□□ -0.94
SPG11-215ENST00000559193 SACSQ9NZJ4 4579 aa9.14□□□□□ -0.95
SPG11-215ENST00000559193 PKHD1P08F94 4074 aa9.14□□□□□ -0.95
SPG11-215ENST00000559193 RPS29P62273 56 aaKnown RBP9.14□□□□□ -0.95
SPG11-215ENST00000559193 Q8N1X5 172 aa9.11□□□□□ -0.95
SPG11-215ENST00000559193 UQCR11O14957 56 aa9.1□□□□□ -0.95
SPG11-215ENST00000559193 MIR22HGQ0VDD5 57 aa9.09□□□□□ -0.95
SPG11-215ENST00000559193 SMR3BP02814 79 aaPredicted RBP9.05□□□□□ -0.96
SPG11-215ENST00000559193 DYNC1H1Q14204 4646 aaKnown RBP9.05□□□□□ -0.96
SPG11-215ENST00000559193 PRAC1Q96KF2 57 aa9.03□□□□□ -0.96
SPG11-215ENST00000559193 C9orf92A6NGG3 77 aa9.02□□□□□ -0.97
SPG11-215ENST00000559193 PKHD1L1Q86WI1 4243 aa9.01□□□□□ -0.97
SPG11-215ENST00000559193 A8MUU9 505 aa9□□□□□ -0.97
SPG11-215ENST00000559193 C20orf166-AS1Q96NR2 134 aa9□□□□□ -0.97
SPG11-215ENST00000559193 ADM2Q7Z4H4 148 aa8.99□□□□□ -0.97
SPG11-215ENST00000559193 KRTAP10-4P60372 401 aaPredicted RBP8.97□□□□□ -0.97
SPG11-215ENST00000559193 FAT1Q14517 4588 aa8.97□□□□□ -0.97
SPG11-215ENST00000559193 APOBP04114 4563 aaKnown RBP8.96□□□□□ -0.97
SPG11-215ENST00000559193 KRTAP3-1Q9BYR8 98 aa8.93□□□□□ -0.98
SPG11-215ENST00000559193 A0A1B0GVY2 172 aa8.92□□□□□ -0.98
SPG11-215ENST00000559193 KRTAP21-3Q3LHN1 58 aa8.86□□□□□ -0.99
SPG11-215ENST00000559193 H0YAA0 97 aa8.82□□□□□ -1
SPG11-215ENST00000559193 LINC01554Q52M75 96 aa8.79□□□□□ -1
SPG11-215ENST00000559193 FLG2Q5D862 2391 aaPredicted RBP8.74□□□□□ -1.01
SPG11-215ENST00000559193 A0A1B0GU33 70 aa8.74□□□□□ -1.01
SPG11-215ENST00000559193 COX6B2Q6YFQ2 88 aa8.73□□□□□ -1.01
SPG11-215ENST00000559193 H1FX-AS1Q4G0G2 97 aa8.72□□□□□ -1.01
SPG11-215ENST00000559193 RYR2Q92736 4967 aa8.71□□□□□ -1.01
SPG11-215ENST00000559193 CSAG1Q6PB30 78 aa8.69□□□□□ -1.02
SPG11-215ENST00000559193 FAT3Q8TDW7 4589 aa8.69□□□□□ -1.02
SPG11-215ENST00000559193 TNXBP22105 4242 aa8.64□□□□□ -1.03
SPG11-215ENST00000559193 LRP1Q07954 4544 aaKnown RBP8.63□□□□□ -1.03
SPG11-215ENST00000559193 KRTAP10-8P60410 259 aa8.6□□□□□ -1.03
SPG11-215ENST00000559193 KMT2CQ8NEZ4 4911 aaKnown RBP8.58□□□□□ -1.04
SPG11-215ENST00000559193 RPL37P61927 97 aaKnown RBP8.55□□□□□ -1.04
SPG11-215ENST00000559193 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms