RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 KRTAP13-1Q8IUC0 172 aa10.16□□□□□ -0.78
PPP4R3A-208ENST00000555462 DNAH17Q9UFH2 4485 aa10.16□□□□□ -0.78
PPP4R3A-208ENST00000555462 DNAH6Q9C0G6 4158 aa10.15□□□□□ -0.78
PPP4R3A-208ENST00000555462 WWC2-AS2Q96NR7 200 aa10.14□□□□□ -0.79
PPP4R3A-208ENST00000555462 MRPL34Q9BQ48 92 aaKnown RBP10.14□□□□□ -0.79
PPP4R3A-208ENST00000555462 SPACA4Q8TDM5 124 aa10.14□□□□□ -0.79
PPP4R3A-208ENST00000555462 RTL8CO15255 209 aa10.13□□□□□ -0.79
PPP4R3A-208ENST00000555462 Q6ZRN7 208 aaPredicted RBP10.12□□□□□ -0.79
PPP4R3A-208ENST00000555462 H3BPC8 53 aa10.12□□□□□ -0.79
PPP4R3A-208ENST00000555462 DNAH2Q9P225 4427 aa10.11□□□□□ -0.79
PPP4R3A-208ENST00000555462 A0A087WTM6 91 aa10.11□□□□□ -0.79
PPP4R3A-208ENST00000555462 LOC101927531A0A1B0GV80 90 aa10.1□□□□□ -0.79
PPP4R3A-208ENST00000555462 VPS13DQ5THJ4 4388 aa10.08□□□□□ -0.8
PPP4R3A-208ENST00000555462 DNAH11Q96DT5 4516 aa10.06□□□□□ -0.8
PPP4R3A-208ENST00000555462 IGLV5-52A0A0A0MRZ9 124 aa10.06□□□□□ -0.8
PPP4R3A-208ENST00000555462 TP53AIP1Q9HCN2 124 aa10.05□□□□□ -0.8
PPP4R3A-208ENST00000555462 Q75L30 129 aa10.04□□□□□ -0.8
PPP4R3A-208ENST00000555462 ZNF861PO60384 105 aa10.04□□□□□ -0.8
PPP4R3A-208ENST00000555462 Q6ZR54 194 aa10.04□□□□□ -0.8
PPP4R3A-208ENST00000555462 LY6G6CO95867 125 aa10□□□□□ -0.81
PPP4R3A-208ENST00000555462 PRAC1Q96KF2 57 aa9.99□□□□□ -0.81
PPP4R3A-208ENST00000555462 RBM12B-AS1Q9P1G2 102 aa9.97□□□□□ -0.81
PPP4R3A-208ENST00000555462 IGKV2D-30A0A075B6S6 120 aa9.96□□□□□ -0.81
PPP4R3A-208ENST00000555462 IGKV2-30P06310 120 aa9.96□□□□□ -0.81
PPP4R3A-208ENST00000555462 ASB16-AS1Q495Z4 193 aa9.96□□□□□ -0.81
PPP4R3A-208ENST00000555462 ATP11AUNQ6ZP68 121 aa9.96□□□□□ -0.81
PPP4R3A-208ENST00000555462 KTN1-AS1Q86SY8 53 aa9.96□□□□□ -0.82
PPP4R3A-208ENST00000555462 ZNF706Q9Y5V0 76 aaPredicted RBP9.96□□□□□ -0.82
PPP4R3A-208ENST00000555462 LINC01558Q9Y6Z2 57 aa9.96□□□□□ -0.82
PPP4R3A-208ENST00000555462 CDC42SE1Q9NRR8 79 aa9.95□□□□□ -0.82
PPP4R3A-208ENST00000555462 NUPR2A6NF83 97 aa9.95□□□□□ -0.82
PPP4R3A-208ENST00000555462 SPINK1P00995 79 aa9.95□□□□□ -0.82
PPP4R3A-208ENST00000555462 LINC00483Q53H64 154 aa9.95□□□□□ -0.82
PPP4R3A-208ENST00000555462 ADM2Q7Z4H4 148 aa9.95□□□□□ -0.82
PPP4R3A-208ENST00000555462 FLG2Q5D862 2391 aaPredicted RBP9.92□□□□□ -0.82
PPP4R3A-208ENST00000555462 IGLV7-43P04211 117 aa9.91□□□□□ -0.82
PPP4R3A-208ENST00000555462 LRP1BQ9NZR2 4599 aa9.91□□□□□ -0.82
PPP4R3A-208ENST00000555462 DNHD1Q96M86 4753 aa9.91□□□□□ -0.82
PPP4R3A-208ENST00000555462 A6NN06 94 aa9.91□□□□□ -0.82
PPP4R3A-208ENST00000555462 KRTAP10-2P60368 255 aa9.89□□□□□ -0.83
PPP4R3A-208ENST00000555462 LINC00313P59037 77 aa9.88□□□□□ -0.83
PPP4R3A-208ENST00000555462 ALMS1Q8TCU4 4167 aa9.87□□□□□ -0.83
PPP4R3A-208ENST00000555462 DMBT1Q9UGM3 2413 aaPredicted RBP9.86□□□□□ -0.83
PPP4R3A-208ENST00000555462 DYNC2H1Q8NCM8 4307 aaKnown RBP9.86□□□□□ -0.83
PPP4R3A-208ENST00000555462 C1orf134Q5TEV5 83 aa9.86□□□□□ -0.83
PPP4R3A-208ENST00000555462 PLAC8Q9NZF1 115 aa9.86□□□□□ -0.83
PPP4R3A-208ENST00000555462 ACYP2P14621 99 aa9.84□□□□□ -0.83
PPP4R3A-208ENST00000555462 A0A1B0GU69 56 aa9.81□□□□□ -0.84
PPP4R3A-208ENST00000555462 Q8N1X5 172 aa9.79□□□□□ -0.84
PPP4R3A-208ENST00000555462 DNAH5Q8TE73 4624 aa9.78□□□□□ -0.84
PPP4R3A-208ENST00000555462 KRTAP13-3Q3SY46 172 aa9.78□□□□□ -0.84
PPP4R3A-208ENST00000555462 KRTAP13-2Q52LG2 175 aa9.78□□□□□ -0.84
PPP4R3A-208ENST00000555462 C7orf65Q6ZTY9 151 aa9.77□□□□□ -0.85
PPP4R3A-208ENST00000555462 FAT2Q9NYQ8 4349 aa9.76□□□□□ -0.85
PPP4R3A-208ENST00000555462 VPS13BQ7Z7G8 4022 aa9.76□□□□□ -0.85
PPP4R3A-208ENST00000555462 HYDINQ4G0P3 5121 aa9.76□□□□□ -0.85
PPP4R3A-208ENST00000555462 KRTAP10-1P60331 282 aa9.69□□□□□ -0.86
PPP4R3A-208ENST00000555462 FAM229AH3BQW9 127 aa9.69□□□□□ -0.86
PPP4R3A-208ENST00000555462 DMAC1Q96GE9 116 aa9.68□□□□□ -0.86
PPP4R3A-208ENST00000555462 SSBP3-AS1Q7Z2R9 100 aa9.66□□□□□ -0.86
PPP4R3A-208ENST00000555462 PKHD1P08F94 4074 aa9.66□□□□□ -0.86
PPP4R3A-208ENST00000555462 PLA2G1BP04054 148 aaKnown RBP9.65□□□□□ -0.86
PPP4R3A-208ENST00000555462 SMR3BP02814 79 aaPredicted RBP9.63□□□□□ -0.87
PPP4R3A-208ENST00000555462 C9orf92A6NGG3 77 aa9.63□□□□□ -0.87
PPP4R3A-208ENST00000555462 MIR22HGQ0VDD5 57 aa9.63□□□□□ -0.87
PPP4R3A-208ENST00000555462 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
PPP4R3A-208ENST00000555462 C8orf87E5RJ46 101 aa9.62□□□□□ -0.87
PPP4R3A-208ENST00000555462 FAT1Q14517 4588 aa9.57□□□□□ -0.88
PPP4R3A-208ENST00000555462 TYMSOSQ8TAI1 123 aa9.57□□□□□ -0.88
PPP4R3A-208ENST00000555462 KRTAP16-1A8MUX0 517 aa9.56□□□□□ -0.88
PPP4R3A-208ENST00000555462 UQCR11O14957 56 aa9.55□□□□□ -0.88
PPP4R3A-208ENST00000555462 KRTAP1-4P0C5Y4 121 aa9.51□□□□□ -0.89
PPP4R3A-208ENST00000555462 CSAG1Q6PB30 78 aa9.5□□□□□ -0.89
PPP4R3A-208ENST00000555462 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
PPP4R3A-208ENST00000555462 SPATA8Q6RVD6 105 aa9.46□□□□□ -0.89
PPP4R3A-208ENST00000555462 PKD1P98161 4303 aa9.46□□□□□ -0.9
PPP4R3A-208ENST00000555462 MYCBP2O75592 4640 aa9.39□□□□□ -0.91
PPP4R3A-208ENST00000555462 LINC01554Q52M75 96 aa9.36□□□□□ -0.91
PPP4R3A-208ENST00000555462 LINC00304Q8N9R0 145 aa9.35□□□□□ -0.91
PPP4R3A-208ENST00000555462 Q6ZSA8 131 aa9.31□□□□□ -0.92
PPP4R3A-208ENST00000555462 H0YAA0 97 aa9.28□□□□□ -0.92
PPP4R3A-208ENST00000555462 DYNC1H1Q14204 4646 aaKnown RBP9.25□□□□□ -0.93
PPP4R3A-208ENST00000555462 KRTAP3-1Q9BYR8 98 aa9.23□□□□□ -0.93
PPP4R3A-208ENST00000555462 LRP1Q07954 4544 aaKnown RBP9.23□□□□□ -0.93
PPP4R3A-208ENST00000555462 A0A1B0GU33 70 aa9.2□□□□□ -0.94
PPP4R3A-208ENST00000555462 A0A0D9SG42 100 aa9.17□□□□□ -0.94
PPP4R3A-208ENST00000555462 SACSQ9NZJ4 4579 aa9.13□□□□□ -0.95
PPP4R3A-208ENST00000555462 HSPG2P98160 4391 aa9.07□□□□□ -0.96
PPP4R3A-208ENST00000555462 APOBP04114 4563 aaKnown RBP9.07□□□□□ -0.96
PPP4R3A-208ENST00000555462 H3BS24 57 aa9.07□□□□□ -0.96
PPP4R3A-208ENST00000555462 A8MUU9 505 aa9.06□□□□□ -0.96
PPP4R3A-208ENST00000555462 H1FX-AS1Q4G0G2 97 aa9.06□□□□□ -0.96
PPP4R3A-208ENST00000555462 FAT3Q8TDW7 4589 aa9.03□□□□□ -0.96
PPP4R3A-208ENST00000555462 COX6B2Q6YFQ2 88 aa9.01□□□□□ -0.97
PPP4R3A-208ENST00000555462 KMT2CQ8NEZ4 4911 aaKnown RBP9.01□□□□□ -0.97
PPP4R3A-208ENST00000555462 C20orf166-AS1Q96NR2 134 aa8.97□□□□□ -0.97
PPP4R3A-208ENST00000555462 KRTAP25-1Q3LHN0 102 aa8.95□□□□□ -0.98
PPP4R3A-208ENST00000555462 PKHD1L1Q86WI1 4243 aa8.94□□□□□ -0.98
PPP4R3A-208ENST00000555462 LPAP08519 4548 aa8.91□□□□□ -0.98
PPP4R3A-208ENST00000555462 KRTAP13-4Q3LI77 160 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms